KEGG   PATHWAY: uah04622
Entry
uah04622                    Pathway                                
Name
RIG-I-like receptor signaling pathway - Ursus arctos horribilis (North American brown bear)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
uah04622  RIG-I-like receptor signaling pathway
uah04622

Organism
Ursus arctos horribilis (North American brown bear) [GN:uah]
Gene
113260537  DDX58; probable ATP-dependent RNA helicase DDX58 isoform X1 [KO:K12646] [EC:5.6.2.6]
113250835  IFIH1; interferon-induced helicase C domain-containing protein 1 [KO:K12647] [EC:5.6.2.6]
113258699  ZNFX1; NFX1-type zinc finger-containing protein 1 [KO:K27391]
113258384  MAVS; mitochondrial antiviral-signaling protein isoform X1 [KO:K12648]
113265431  DHX58; probable ATP-dependent RNA helicase DHX58 [KO:K12649] [EC:5.6.2.6]
113267235  TRAF3; TNF receptor-associated factor 3 isoform X1 [KO:K03174]
113250842  TANK; TRAF family member-associated NF-kappa-B activator isoform X1 [KO:K12650]
113253854  AZI2; 5-azacytidine-induced protein 2 isoform X1 [KO:K12651]
113265554  TBKBP1; TANK-binding kinase 1-binding protein 1 isoform X1 [KO:K12652]
113247832  IKBKG; NF-kappa-B essential modulator isoform X1 [KO:K07210]
113256330  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
113242466  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
113243290  IRF3; interferon regulatory factor 3 isoform X1 [KO:K05411]
113248784  IRF7; interferon regulatory factor 7 [KO:K09447]
113260290  interferon alpha-1/2-like [KO:K05414]
113260291  interferon alpha-1/2-like [KO:K05414]
113260293  interferon alpha-1/2-like [KO:K05414]
113260294  interferon alpha-2-like [KO:K05414]
113260295  IFNB1; interferon beta [KO:K05415]
113260289  IFNE; interferon epsilon [KO:K05442]
113260554  IFNK; interferon kappa [KO:K05441]
113252355  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1 [KO:K03171]
113243978  FADD; FAS-associated death domain protein [KO:K02373]
113264397  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
113250592  CASP8; caspase-8 isoform X1 [KO:K04398] [EC:3.4.22.61]
113250594  CASP10; LOW QUALITY PROTEIN: caspase-10 [KO:K04400] [EC:3.4.22.63]
113251823  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
113245546  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta [KO:K07209] [EC:2.7.11.10]
113243600  NFKBIB; NF-kappa-B inhibitor beta isoform X1 [KO:K02581]
113266131  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
113263101  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
113244102  RELA; transcription factor p65 [KO:K04735]
113248591  TNF receptor-associated factor 2 isoform X1 [KO:K03173] [EC:2.3.2.27]
113248645  TNF receptor-associated factor 2 isoform X1 [KO:K03173] [EC:2.3.2.27]
113264818  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
113265029  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
113255319  MAP3K1; mitogen-activated protein kinase kinase kinase 1 [KO:K04416] [EC:2.7.11.25]
113263180  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
113261548  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
113243106  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
113241613  MAPK11; mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
113241615  MAPK12; mitogen-activated protein kinase 12 [KO:K04441] [EC:2.7.11.24]
113243852  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
113243854  MAPK13; mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
113263279  CXCL8; interleukin-8 [KO:K10030]
113243711  TNF; tumor necrosis factor [KO:K03156]
113254130  IL12A; interleukin-12 subunit alpha [KO:K05406]
113263879  IL12B; interleukin-12 subunit beta [KO:K05425]
113263254  CXCL10; C-X-C motif chemokine 10 [KO:K12671]
113245303  ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 [KO:K12968] [EC:3.5.4.37]
113268845  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 [KO:K10652] [EC:2.3.2.27]
113252226  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD isoform X1 [KO:K08601] [EC:3.4.19.12]
113253322  RNF125; E3 ubiquitin-protein ligase RNF125 isoform X1 [KO:K12170] [EC:2.3.2.27]
113270654  ISG15; ubiquitin-like protein ISG15 [KO:K12159]
113264784  ATG5; autophagy protein 5 isoform X1 [KO:K08339]
113261610  ATG12; ubiquitin-like protein ATG12 isoform X1 [KO:K08336]
113259964  NLRX1; NLR family member X1 [KO:K12653]
113261804  TMEM173; stimulator of interferon genes protein [KO:K12654]
113265937  OTUD5; OTU domain-containing protein 5 isoform X1 [KO:K12655] [EC:3.4.19.12]
113244392  SIKE1; suppressor of IKBKE 1 [KO:K12656]
113248381  ATP-dependent RNA helicase DDX3X-like isoform X1 [KO:K11594] [EC:5.6.2.7]
113265882  DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 [KO:K11594] [EC:5.6.2.7]
113242967  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
113246914  TKFC; triokinase/FMN cyclase [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
uah04010  MAPK signaling pathway
uah04120  Ubiquitin mediated proteolysis
uah04210  Apoptosis
uah04630  JAK-STAT signaling pathway
KO pathway
ko04622   
LinkDB

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