KEGG   PATHWAY: zma03420
Entry
zma03420                    Pathway                                
Name
Nucleotide excision repair - Zea mays (maize)
Description
Nucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the NER pathway are linked to at least three diseases: xeroderma pigmentosum (XP), Cockayne syndrome (CS), and trichothiodystrophy (TTD). The repair of damaged DNA involves at least 30 polypeptides within two different sub-pathways of NER known as transcription-coupled repair (TCR-NER) and global genome repair (GGR-NER). TCR refers to the expedited repair of lesions located in the actively transcribed strand of genes by RNA polymerase II (RNAP II). In GGR-NER the first step of damage recognition involves XPC-hHR23B complex together with XPE complex (in prokaryotes, uvrAB complex). The following steps of GGR-NER and TCR-NER are similar.
Class
Genetic Information Processing; Replication and repair
Pathway map
zma03420  Nucleotide excision repair
zma03420

Other DBs
GO: 0006289
Organism
Zea mays (maize) [GN:zma]
Gene
100126965  [KO:K10740]
100191313  [KO:K10839]
100191330  [KO:K03012]
100192494  [KO:K03143]
100192592  [KO:K10849]
100192883  [KO:K10848] [EC:3.1.-.-]
100192928  [KO:K03868] [EC:2.3.2.32]
100193357  [KO:K10756]
100193880  [KO:K03013]
100193949  [KO:K03141]
100194011  [KO:K03504]
100216703  [KO:K10756]
100272286  [KO:K10739]
100272776  [KO:K02202] [EC:2.7.11.22 2.7.11.23]
100273250  [KO:K03013]
100273584  [KO:K07466]
100273893  [KO:K02202] [EC:2.7.11.22 2.7.11.23]
100273995  [KO:K03013]
100274213  [KO:K03008]
100274222  [KO:K10839]
100274342  [KO:K03142]
100275606  [KO:K10570]
100277195  [KO:K03010] [EC:2.7.7.6]
100278704  [KO:K23720]
100279448  [KO:K10610]
100279971  [KO:K03504]
100280534  [KO:K03505]
100280690  [KO:K02325] [EC:2.7.7.7]
100280726  [KO:K07466]
100281008  [KO:K03016]
100281631  [KO:K10845]
100281783  [KO:K03007]
100282197  [KO:K10755]
100282338  [KO:K03012]
100282427  [KO:K10839]
100282532  [KO:K03014]
100282638  [KO:K03505]
100282678  [KO:K10755]
100282762  [KO:K10839]
100282883  [KO:K03011]
100282897  [KO:K02326] [EC:2.7.7.7]
100283179  [KO:K10839]
100283223  [KO:K03015]
100283481  [KO:K10740]
100283483  [KO:K06634]
100283558  [KO:K03014]
100284267  [KO:K03017]
100284471  [KO:K03009]
100284506  [KO:K10842]
100285004  [KO:K03009]
100285013  [KO:K10739]
100285329  [KO:K03017]
100285427  [KO:K07466]
100285903  [KO:K10739]
100285910  [KO:K10740]
100285960  [KO:K10844] [EC:5.6.2.3]
100286035  [KO:K03007]
100381699  [KO:K10140]
100382167  [KO:K02328]
100383373  [KO:K07466]
100383890  [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
100501431  [KO:K10609]
103625817  [KO:K10756]
103625822  [KO:K10609]
103626041  [KO:K03010] [EC:2.7.7.6]
103627197  [KO:K02324] [EC:2.7.7.7]
103627413  [KO:K03008]
103627414  [KO:K03008]
103627418  [KO:K03008]
103627422  [KO:K03008]
103627452  [KO:K10739]
103628156  [KO:K03010] [EC:2.7.7.6]
103632168  [KO:K10846]
103634739  [KO:K03868] [EC:2.3.2.32]
103635427  [KO:K10610]
103637697  [KO:K10756]
103638012  [KO:K10842]
103641202  [KO:K02335] [EC:2.7.7.7]
103642101  [KO:K02335] [EC:2.7.7.7]
103642327  [KO:K03504]
103645297  [KO:K10838]
103645755  [KO:K03144]
103646824  [KO:K03017]
103648088  [KO:K10754]
103649912  [KO:K03868] [EC:2.3.2.32]
103649923  [KO:K10841]
103651319  [KO:K10843] [EC:5.6.2.4]
103654581  [KO:K02327] [EC:2.7.7.7]
109939580  [KO:K03008]
109939981  [KO:K03008]
109939982  [KO:K03008]
113633883  [KO:K03007]
541967  [KO:K03006] [EC:2.7.7.6]
542357  [KO:K04802]
542425  [KO:K04802]
Reference
  Authors
Sugasawa K.
  Title
[Molecular mechanism of mammalian nucleotide excision repair]
  Journal
Tanpakushitsu Kakusan Koso 46:893-901 (2001)
Reference
  Authors
Nakatsu Y.
  Title
[Transcription-coupled repair and Cockayne syndrome]
  Journal
Tanpakushitsu Kakusan Koso 46:908-15 (2001)
Reference
  Authors
Nakagawa N, Masui R, Kuramitsu S.
  Title
[Structure and function of DNA repair enzyme UvrB from Thermus thermophilus HB8]
  Journal
Tanpakushitsu Kakusan Koso 46:968-75 (2001)
Reference
  Authors
Kraemer KH, Patronas NJ, Schiffmann R, Brooks BP, Tamura D, DiGiovanna JJ.
  Title
Xeroderma pigmentosum, trichothiodystrophy and Cockayne syndrome: a complex genotype-phenotype relationship.
  Journal
Neuroscience 145:1388-96 (2007)
DOI:10.1016/j.neuroscience.2006.12.020
Reference
  Authors
Saldivar JS, Wu X, Follen M, Gershenson D.
  Title
Nucleotide excision repair pathway review I: implications in ovarian cancer and platinum sensitivity.
  Journal
Gynecol Oncol 107:S56-71 (2007)
DOI:10.1016/j.ygyno.2007.07.043
Reference
  Authors
Sugasawa K.
  Title
[DNA repair pathways involving Cul4A ubiquitin ligases]
  Journal
Tanpakushitsu Kakusan Koso 51:1339-44 (2006)
Reference
  Authors
Ito S, Ando D, Tanaka K.
  Title
[Cross-talk between DNA repair and transcription: molecular mechanism and disorders]
  Journal
Tanpakushitsu Kakusan Koso 52:1823-31 (2007)
Related
pathway
zma03020  RNA polymerase
zma04120  Ubiquitin mediated proteolysis
KO pathway
ko03420   

DBGET integrated database retrieval system