SSDB Best Search Result

Entry:dlu:A6035_13145 (906 a.a.)
Name:ATP-dependent DNA ligase
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 223 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812     2526     0.463      935     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758     2380     0.457      909     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766     2347     0.450      913     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808     2224     0.441      894     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899     2207     0.423      941     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770     2195     0.431      917     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759     2188     0.427      902     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759     2185     0.427      902     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770     2183     0.428      914     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750     2171     0.441      898     
msm:MSMEG_5570 DNA ligase                               K01971     755     2116     0.420      902     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763     2115     0.423      910     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836     1079     0.401      539     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      999     0.357      540     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      997     0.370      541     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      993     0.373      541     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      981     0.383      554     
atu:Atu4632 ATP-dependent DNA ligase                    K01971     771      981     0.347      548     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      974     0.374      564     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      974     0.364      544     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      972     0.353      544     
sno:Snov_0819 DNA ligase D                              K01971     842      968     0.376      550     
ssy:SLG_04290 putative DNA ligase                       K01971     835      963     0.370      551     
swi:Swit_3982 DNA ligase D                              K01971     837      953     0.360      544     
xau:Xaut_4365 DNA ligase D                              K01971     886      953     0.351      556     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      952     0.357      555     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      952     0.335      573     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      950     0.366      530     
rpa:TX73_018915 DNA ligase D                            K01971     914      949     0.359      582     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901      937     0.347      579     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      936     0.353      601     
phe:Phep_1702 DNA ligase D                              K01971     877      922     0.338      551     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      922     0.356      545     
rle:pRL120229 putative DNA ligase family protein        K01971     881      918     0.352      554     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      917     0.343      589     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      916     0.337      591     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      911     0.331      553     
cpy:Cphy_1729 DNA ligase D                              K01971     813      893     0.346      535     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      884     0.356      606     
nca:Noca_1237 ATP dependent DNA ligase                  K01971     304      883     0.487      302     
dsy:DSY0616 hypothetical protein                        K01971     818      871     0.345      528     
ppu:PP_3260 DNA ligase D                                K01971     833      866     0.348      529     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      855     0.468      301     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      852     0.349      522     
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670      838     0.463      296     
ase:ACPL_519 DNA ligase (ATP)                           K01971     301      775     0.431      290     
sen:SACE_3549 DNA ligase (ATP)                          K01971     302      774     0.447      300     
stp:Strop_3967 DNA primase, small subunit               K01971     302      753     0.440      291     
sma:SAVERM_2946 putative DNA ligase                     K01971     293      732     0.426      282     
sct:SCAT_5459 conserved protein of unknown function     K01971     298      730     0.424      283     
sgu:SGLAU_22865 DNA polymerase LigD, polymerase domain- K01971     290      724     0.420      281     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      717     0.306      725     
sco:SCO5308 conserved hypothetical protein              K01971     293      686     0.401      282     
sgr:SGR_2196 conserved hypothetical protein             K01971     296      655     0.412      284     
vg:22109413 Rhizobium phage vB_RleM_PPF1; non-homologou K01971     348      601     0.342      322     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      586     0.316      516     
scl:sce3523 unnamed protein product; High confidence in K01971     762      561     0.349      361     
mta:Moth_2067 conserved hypothetical protein            K01971     312      540     0.329      277     
mba:Mbar_A2115 conserved hypothetical protein                      151      523     0.544      147     
sro:Sros_6714 DNA primase small subunit                            334      520     0.311      283     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      519     0.309      291     
mma:MM_0209 hypothetical protein                                   152      517     0.524      147     
chy:CHY_0025 conserved hypothetical protein             K01971     293      508     0.335      272     
mac:MA_3428 conserved hypothetical protein                         156      505     0.530      149     
pde:Pden_4186 conserved hypothetical protein            K01971     330      494     0.312      272     
afu:AF_1725 DNA ligase, putative                        K01971     313      488     0.326      316     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      481     0.346      269     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      475     0.341      252     
det:DET0850 conserved hypothetical protein                         183      467     0.457      162     
hma:rrnAC0463 DNA ligase                                K10747     554      438     0.340      329     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      434     0.306      288     
oih:OB3034 hypothetical conserved protein               K01971     595      419     0.299      271     
pab:PAB2002 lig DNA ligase                              K10747     559      415     0.317      309     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      396     0.287      314     
pfu:PF1635 DNA ligase (lig)                             K10747     561      392     0.313      310     
hal:VNG_0881G DNA ligase                                K10747     561      384     0.328      354     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      378     0.294      316     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      372     0.310      313     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      372     0.301      306     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      369     0.325      335     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      365     0.313      310     
pfl:PFL_6269 Hypothetical protein                       K01971     186      363     0.430      135     
ton:TON_1515 thermostable DNA ligase                    K10747     562      352     0.311      312     
pai:PAE0833 DNA ligase                                  K10747     584      348     0.266      312     
hth:HTH_1466 DNA ligase                                            572      329     0.279      312     
ame:413086 DNA ligase 3 isoform X1                      K10776    1117      329     0.287      366     
aae:aq_1394 DNA ligase (ATP dependent)                             585      329     0.299      284     
bmor:101739679 DNA ligase 3                             K10776     998      320     0.273      373     
tac:Ta1148 DNA ligase related protein                   K10747     588      320     0.279      315     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      314     0.293      287     
xom:XOO1771 DNA ligase                                             534      312     0.307      290     
ddi:DDB_G0283857 BRCT domain-containing protein                   1175      309     0.257      346     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      309     0.291      344     
smo:SELMODRAFT_414166 hypothetical protein              K10777    1171      306     0.276      330     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      305     0.303      346     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      305     0.281      356     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      304     0.268      317     
tca:656322 ligase III                                   K10776     853      303     0.266      353     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      303     0.294      350     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      303     0.263      357     
sto:STK_02230 DNA ligase                                K10747     600      295     0.254      323     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      294     0.268      422     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      292     0.294      337     
cne:CNI04170 DNA ligase, putative                       K10747     803      291     0.286      311     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      289     0.259      320     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      289     0.272      312     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      289     0.273      315     
tva:5466150 DNA ligase 1/3 family member family                    679      287     0.265      317     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      286     0.286      357     
ksk:KSE_05320 hypothetical protein                      K01971     173      286     0.338      136     
spu:581252 DNA ligase 3                                 K10776    1049      285     0.229      668     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      284     0.294      354     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      284     0.270      311     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      282     0.255      314     
mmu:16881 DNA ligase 1                                  K10747     916      281     0.290      355     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      279     0.291      357     
ppp:112291880 DNA ligase 4                              K10777    1297      279     0.276      380     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      279     0.285      354     
xtr:549105 DNA ligase 3                                 K10776     893      279     0.291      289     
xla:398275 ligase III, DNA, ATP-dependent L homeolog    K10776     988      278     0.298      289     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      277     0.283      357     
pto:PTO0672 DNA ligase                                  K10747     590      276     0.262      321     
cin:100170070 DNA ligase 3                              K10776     854      275     0.230      696     
tcr:506835.120 DNA ligase I                             K10747     701      275     0.254      417     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      274     0.307      274     
csv:101204319 DNA ligase 4 isoform X1                   K10777    1215      273     0.277      336     
ola:101156760 DNA ligase 3                              K10776    1011      273     0.259      351     
ncr:NCU06481 DNA ligase                                 K10747     923      273     0.274      390     
rno:81513 DNA ligase 1                                  K10747     913      273     0.285      354     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      271     0.281      359     
vvi:100266816 DNA ligase 6 isoform X1                             1449      271     0.274      339     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      271     0.280      357     
sly:101249429 DNA ligase 6 isoform X1                             1441      270     0.277      343     
zma:103645969 putative DNA ligase 4 isoform X1          K10777    1208      269     0.268      380     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      269     0.255      318     
tps:THAPSDRAFT_268404 ligase                            K10747     633      268     0.284      363     
sot:102603887 DNA ligase 1                                        1441      267     0.271      343     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      266     0.283      357     
cpoc:100734013 DNA ligase 1                             K10747     919      266     0.286      357     
mtr:11442607 DNA ligase 6 isoform X1                              1409      266     0.279      340     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      266     0.265      366     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      265     0.297      364     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      265     0.280      357     
dre:556995 DNA ligase 1                                 K10747    1058      265     0.280      357     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      264     0.279      358     
gmx:100807673 DNA ligase 6 isoform X1                             1402      264     0.271      340     
mdo:100021775 DNA ligase 3                              K10776    1005      264     0.259      352     
rcu:8265013 DNA ligase 6 isoform X1                               1394      263     0.274      354     
osa:9269006 putative DNA ligase 4                       K10777    1296      263     0.261      379     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      263     0.272      323     
mth:MTH_1580 DNA ligase                                 K10747     561      263     0.284      334     
pmur:107285325 DNA ligase 1                             K10747     944      262     0.292      360     
ecb:100071671 DNA ligase 3 isoform X3                   K10776     954      262     0.261      353     
rfq:117012947 DNA ligase 3 isoform X1                   K10776    1015      261     0.259      352     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      260     0.283      360     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      260     0.275      356     
cit:102618631 DNA ligase 6 isoform X1                             1402      259     0.284      342     
clv:102083602 DNA ligase 3                              K10776     994      259     0.260      350     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      259     0.286      357     
gga:417530 DNA ligase 3                                 K10776    1008      259     0.260      350     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      258     0.279      362     
bta:100124507 DNA ligase 1                              K10747     916      258     0.279      362     
ssc:100520434 DNA ligase 1                              K10747     923      258     0.281      356     
dne:112984532 DNA ligase 4                              K10777     911      257     0.260      350     
ehi:EHI_111060 DNA ligase                               K10747     685      257     0.275      287     
tgu:100225693 DNA ligase 4                              K10777     911      256     0.271      351     
ath:AT5G57160 DNA ligase IV                             K10777    1219      256     0.275      338     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      255     0.258      360     
apla:101804830 DNA ligase 4                             K10777     976      254     0.259      351     
dme:Dmel_CG17227 DNA ligase 3                           K10776     806      253     0.270      278     
tgo:7896565 DNA ligase 1, putative                                1331      252     0.283      307     
nta:107827172 DNA ligase 4 isoform X1                   K10777    1169      250     0.270      381     
tru:101071353 DNA ligase 4                              K10777     908      250     0.271      354     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      250     0.263      357     
amj:102572799 DNA ligase 3                              K10776     906      249     0.221      763     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      248     0.265      381     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      248     0.263      353     
mdm:103451039 DNA ligase 4                              K10777    1162      247     0.255      381     
zga:ZOBELLIA_2113 DNA ligase                                       554      246     0.266      274     
smm:Smp_019840.1 DNA ligase I, putative                            783      246     0.285      295     
yli:2908208 DNA ligase 1                                K10747     711      244     0.270      315     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      244     0.258      356     
nve:5509532 DNA ligase 3                                K10776     946      243     0.248      326     
ani:ANIA_06069 hypothetical protein                     K10747     932      240     0.224      771     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      237     0.269      361     
pif:PITG_04709 DNA ligase, putative                               3896      237     0.271      369     
aor:AO090120000322 unnamed protein product; ATP-depende K10777    1006      237     0.256      301     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      232     0.282      316     
fgr:FGSG_05453 DNA ligase                               K10747     867      231     0.278      349     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      229     0.266      346     
mgr:MGG_06370 DNA ligase 1                              K10747     896      223     0.260      346     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      220     0.309      262     
pti:PHATR_51005 hypothetical protein                    K10747     651      218     0.275      360     
vpa:VP1477 DNA ligase                                   K26441     280      211     0.268      257     
vch:VC_1542 DNA ligase                                  K26441     282      208     0.291      247     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      196     0.296      253     
gla:GL50803_007649 DNA ligase (ATP)                                810      192     0.254      382     
vfi:VF_1450 DNA ligase                                  K26441     285      184     0.260      250     
son:SO_2204 DNA ligase ATP-dependent                    K26441     311      180     0.293      222     
cgl:Cgl1911 DNA-directed RNA polymerase sigma subunits  K03086     498      177     0.283      180     
ngo:NGO_2034 DNA ligase                                 K26441     274      175     0.278      237     
nme:NMB2048 DNA ligase                                  K26441     274      173     0.278      237     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      170     0.280      257     
ser:SERP1534 DNA ligase, ATP-dependent                             432      164     0.236      254     
cps:CPS_4404 DNA ligase, ATP-dependent                  K26441     292      156     0.260      223     
blo:BL1428 RNA polymerase principal sigma factor; sigma K03086     474      152     0.294      126     
lpl:lp_0869 extracellular protein, Ser/Thr-rich                    169      137     0.316      98      
lil:LA_0984 ATP-dependent DNA ligase                    K01971     501      137     0.208      298     
anb:ANA_C10652 hypothetical protein                                552      136     0.239      284     
mpn:MPN_491 membrane nuclease                                      474      132     0.226      199     
hpy:HP_0080 predicted coding region HP0080                         593      132     0.243      268     
cpn:CPn_0886 Histone-Like Developmental Protein                    123      132     0.531      49      
hin:HI_1182 predicted coding region HI1182              K26441     185      131     0.254      173     
eca:ECA1000 N-acetylmuramoyl-L-alanine amidase          K01448     414      129     0.276      210     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      128     0.233      227     
pam:PANA_3104 AmiC                                      K01448     414      126     0.234      291     
bbu:BB_K50 immunogenic protein P37                                 332      123     0.236      157     
ral:Rumal_3420 hypothetical protein                                250      122     0.269      156     
npu:Npun_R5656 conserved hypothetical protein                      639      122     0.288      146     
esa:ESA_00300 hypothetical protein                                 398      117     0.286      112     
cac:CA_C1078 Predicted phosphohydrolase, Icc family                356      112     0.224      134     
pdi:BDI_2773 putative transcriptional regulator                    272      111     0.263      209     
ddd:Dda3937_04023 conserved protein                     K09161     164      107     0.318      107     

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