SSDB Best Search Result

Entry:tbn:TBH_C2736 (352 a.a.)
Name:DNA polymerase III delta subunit
KO:K02340 DNA polymerase III subunit delta

Search Result : 134 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
ppu:PP_4796 DNA polymerase III, delta subunit           K02340     345     1069     0.497      336     
pst:PSPTO_4814 DNA polymerase III, delta subunit        K02340     345     1043     0.497      336     
psb:Psyr_4354 DNA polymerase III, delta subunit         K02340     345     1038     0.488      336     
avn:Avin_08980 DNA polymerase III, delta subunit        K02340     346      999     0.485      336     
pae:PA3989 DNA polymerase III subunit delta             K02340     345      973     0.482      336     
mca:MCA1451 DNA polymerase III, delta subunit           K02340     334      940     0.446      332     
reh:H16_A3137 DNA polymerase III delta subunit          K02340     352      825     0.410      351     
bma:BMA2451 DNA polymerase III, delta subunit           K02340     362      823     0.421      354     
bps:BPSL2936 putative DNA polymerase III                K02340     362      823     0.421      354     
eba:ebA4383 DNA polymerase III, delta subunit           K02340     335      822     0.436      335     
rso:RSc2742 probable dna polymerase III (delta subunit) K02340     358      816     0.410      349     
bpe:BP2042 putative DNA polymerase III, delta subunit   K02340     351      814     0.411      338     
ngo:NGO_0283 DNA polymerase III subunit delta           K02340     332      812     0.409      318     
nme:NMB0708 DNA polymerase III, delta subunit           K02340     332      801     0.403      318     
bxe:Bxe_A0578 DNA polymerase III, delta subunit         K02340     372      787     0.388      348     
xcc:XCC2617 DNA polymerase III delta subunit            K02340     342      782     0.384      333     
xac:XAC2779 DNA polymerase III delta subunit            K02340     342      765     0.384      333     
xom:XOO3140 DNA polymerase III delta subunit            K02340     342      761     0.381      333     
xfa:XF_2178 DNA polymerase III, delta subunit           K02340     343      681     0.356      334     
vvu:VV1_0275 DNA polymerase III, delta subunit          K02340     341      599     0.312      340     
ddd:Dda3937_02479 DNA polymerase III, delta subunit     K02340     343      598     0.328      332     
vpa:VP0725 DNA polymerase III, delta subunit            K02340     339      592     0.325      329     
son:SO_1172 DNA polymerase III delta subunit HolA       K02340     343      586     0.325      329     
smar:SM39_0621 DNA polymerase III, delta subunit        K02340     344      585     0.322      335     
vfi:VF_0751 DNA polymerase III, delta subunit           K02340     344      573     0.317      331     
seo:STM14_0754 DNA polymerase III subunit delta         K02340     343      571     0.318      337     
sty:STY0697 DNA polymerase III, delta subunit           K02340     343      571     0.318      337     
stm:STM0646 DNA polymerase III, delta subunit           K02340     343      571     0.318      337     
kpn:KPN_00672 DNA polymerase III subunit delta          K02340     344      569     0.320      337     
cro:ROD_06601 DNA polymerase III, delta subunit         K02340     343      564     0.315      337     
eca:ECA1307 DNA polymerase III, delta subunit           K02340     341      555     0.305      331     
eam:EAMY_1122 DNA polymerase III, delta subunit         K02340     343      550     0.306      333     
ypk:y1182 DNA polymerase III, delta subunit             K02340     344      548     0.293      331     
ype:YPO2608 DNA polymerase III, delta subunit           K02340     344      548     0.293      331     
vch:VC_0953 DNA polymerase III, delta subunit           K02340     342      547     0.313      329     
ecs:ECs_0678 DNA polymerase III delta subunit           K02340     343      545     0.312      337     
ece:Z0787 DNA polymerase III, delta subunit             K02340     343      545     0.312      337     
enc:ECL_03056 DNA polymerase III subunit delta          K02340     343      544     0.303      337     
eco:b0640 DNA polymerase III subunit delta              K02340     343      544     0.312      337     
ecj:JW0635 DNA polymerase III, delta subunit            K02340     343      544     0.312      337     
yps:YPTB1101 DNA polymerase III, delta subunit          K02340     344      540     0.290      331     
sfl:SF0641 DNA polymerase III subunit delta             K02340     343      540     0.312      337     
yen:YE2998 DNA polymerase III, delta subunit            K02340     344      527     0.293      331     
pmu:PM1216 HolA                                         K02340     359      498     0.297      350     
lpn:lpg1346 DNA polymerase III, delta subunit           K02340     341      484     0.269      334     
apl:APL_0874 DNA polymerase III subunit delta           K02340     341      456     0.271      332     
hin:HI_0923 DNA polymerase III, delta subunit (holA)    K02340     344      442     0.255      337     
hdu:HD_1130 DNA polymerase III delta subunit            K02340     341      438     0.274      332     
ftu:FTT_0197c DNA polymerase III, delta subunit         K02340     325      409     0.271      329     
aci:ACIAD3108 putative DNA polymerase III, delta subuni K02340     331      381     0.278      335     
acb:A1S_0539 putative DNA polymerase III delta subunit  K02340     329      380     0.282      319     
gsu:GSU2207 DNA polymerase III, delta subunit           K02340     337      251     0.231      334     
bja:blr0629 ORF_ID:blr0629; hypothetical protein        K02340     342      250     0.256      309     
btk:BT9727_4060 possible DNA polymerase III, delta subu K02340     336      249     0.233      318     
ban:BA_4548 DNA polymerase III, delta subunit           K02340     336      249     0.233      318     
bce:BC4321 DNA polymerase III, delta subunit            K02340     336      245     0.233      318     
sma:SAVERM_5558 putative DNA polymerase III delta subun K02340     336      243     0.269      323     
dra:DR_1244 conserved hypothetical protein              K02340     300      239     0.281      317     
rru:Rru_A3629 DNA polymerase III, delta subunit         K02340     342      238     0.278      324     
sgu:SGLAU_11680 DNA polymerase III, delta subunit       K02340     333      234     0.265      321     
lmo:lmo1481 DNA polymerase III subunit delta            K02340     343      231     0.227      330     
lin:lin1516 similar to unknown protein                  K02340     343      227     0.224      330     
sco:SCO2564 putative DNA-binding protein                K02340     336      224     0.255      321     
sgr:SGR_4982 putative DNA-binding protein               K02340     328      220     0.244      324     
rpa:TX73_001505 DNA polymerase III subunit delta        K02340     343      219     0.225      293     
mta:Moth_0576 DNA polymerase III, delta subunit         K02340     330      217     0.247      336     
bmf:BAB1_2058 putative DNA polymerase III, delta subuni K02340     347      215     0.239      293     
bms:BR2057 conserved hypothetical protein               K02340     347      215     0.239      293     
bme:BMEI0011 DNA polymerase iii, delta subunit          K02340     347      215     0.239      293     
cau:Caur_2419 DNA polymerase III, delta subunit         K02340     323      210     0.257      303     
atu:Atu2750 conserved hypothetical protein              K02340     345      210     0.230      304     
sme:SMc02802 Putative DNA polymerase III, delta subunit K02340     343      209     0.274      230     
tth:TT_C0434 hypothetical cytosolic protein             K02340     292      208     0.289      298     
ksk:KSE_25840 putative DNA polymerase III subunit delta K02340     331      204     0.256      320     
ser:SERP1154 conserved hypothetical protein             K02340     324      195     0.218      316     
efa:EF2446 hypothetical protein                         K02340     342      195     0.219      329     
sao:SAOUHSC_01690 DNA polymerase III subunit delta      K02340     324      193     0.215      274     
sau:SA1415 conserved hypothetical protein               K02340     324      192     0.215      274     
bsu:BSU25560 hypothetical protein                       K02340     347      188     0.203      330     
buc:BU445 DNA polymerase III delta subunit              K02340     331      181     0.168      327     
lpl:lp_2128 DNA-directed DNA polymerase III, delta chai K02340     353      175     0.214      332     
rha:RHA1_ro01286 possible DNA polymerase III delta subu K02340     535      174     0.251      311     
pde:Pden_2767 DNA polymerase III, delta subunit         K02340     342      173     0.216      334     
ret:RHE_CH04118 putative DNA polymerase III, delta subu K02340     346      173     0.222      288     
ccr:CC_3751 hypothetical protein                        K02340     350      173     0.230      318     
bth:BT_0889 DNA polymerase III-like, delta subunit      K02340     339      170     0.204      309     
sct:SCAT_1607 putative DNA-binding protein              K02340     329      169     0.249      333     
bfr:BF2396 conserved hypothetical protein               K02340     339      168     0.210      309     
mlo:mlr4475 weak similarity to DNA polymerase III, delt K02340     347      168     0.241      249     
rle:RL4734 conserved hypothetical protein               K02340     346      161     0.218      303     
lla:L102491 hypothetical protein                        K02340     334      153     0.215      312     
cpe:CPE2043 conserved hypothetical protein              K02340     348      152     0.205      264     
amd:AMED_6686 DNA polymerase III subunit delta          K02340     326      151     0.249      333     
llm:llmg_0768 putative DNA polymerase III, delta subuni K02340     334      145     0.219      311     
ag:CAD19087 stigmatellin polyketide synthase StiC       K16407    1885      141     0.256      203     
cre:CHLRE_02g140981v5 uncharacterized protein                      513      140     0.248      322     
cte:CT1948 conserved hypothetical protein               K02340     346      140     0.232      315     
dvu:DVU_1194 hypothetical protein                       K02340     368      139     0.240      204     
cgl:Cgl2346 DNA polymerase III delta subunit            K02340     325      139     0.200      270     
aae:aq_1104 putative protein                            K02340     350      137     0.222      198     
blo:BL1454 hypothetical protein with possible DNA bindi K02340     291      135     0.220      286     
spy:SPy_1407 DNA polymerase III delta subunit           K02340     346      135     0.211      246     
ath:AT1G01830 ARM repeat superfamily protein                       574      134     0.261      180     
gvi:gll0066 ORF_ID:gll0066; hypothetical protein        K02340     321      134     0.238      324     
cdf:CD630_24740 putative DNA polymerase III, delta subu K02340     330      132     0.199      316     
mmu:20170 HPS6, biogenesis of lysosomal organelles comp K20192     805      130     0.282      216     
tel:tlr1573 ORF_ID:tlr1573; hypothetical protein        K02340     342      127     0.235      255     
mtc:MT2486 conserved hypothetical protein               K02340     322      126     0.247      312     
lcb:LCABL_15520 DNA-directed DNA polymerase III, delta  K02340     347      123     0.203      311     
xla:108703045 peroxisomal bifunctional enzyme           K07514     727      123     0.227      313     
vg:18982944 Turkey associated porprismacovirus 1; repli            243      122     0.247      166     
cac:CA_C1273 Uncharacterized protein, YQEN B.subtilis h K02340     343      122     0.181      160     
gga:112532134 uncharacterized protein LOC112532134                 574      120     0.280      186     
fps:FP1053 Probable DNA polymerase III, delta subunit   K02340     334      119     0.175      217     
msm:MSMEG_0434 aminoglycoside 2'-N-acetyltransferase (A K17840     210      119     0.265      189     
tde:TDE_0729 conserved hypothetical protein             K02340     338      119     0.222      212     
cdi:DIP1769 Conserved hypothetical protein              K02340     324      119     0.213      305     
smu:SMU_628 conserved hypothetical protein              K02340     346      119     0.196      245     
lil:LA_0014 DNA-directed DNA polymerase delta subunit   K02340     362      119     0.205      224     
sly:101248517 tubulin-folding cofactor D                K21767    1261      117     0.288      229     
tbr:Tb927.4.1060 hypothetical protein, conserved                  1101      117     0.251      191     
hth:HTH_1837 DNA polymerase III delta subunit           K02340     329      116     0.193      202     
ecb:100070127 NADP-dependent malic enzyme isoform X1    K00029     572      116     0.280      225     
gmx:100805784 anthocyanidin 3-O-glucosyltransferase 5   K08237     505      111     0.256      164     
fgr:FGSG_08374 hypothetical protein                                261      110     0.338      74      
mdm:103411574 cytochrome P450 736A117-like                         509      109     0.274      146     
mtr:11432583 pentatricopeptide repeat-containing protei            504      108     0.293      133     
mpn:MPN_450 conserved hypothetical protein              K02340     314      108     0.250      168     
afm:AFUA_6G02030 aminotransferase                                  396      107     0.276      127     
wol:WD_0364 conserved hypothetical protein              K02340     330      105     0.223      260     
mdo:103098663 ecto-ADP-ribosyltransferase 5-like        K19977     292      101     0.247      182     
aag:5564127 neuroglobin                                 K21893     217       99     0.266      94      
fca:123381494 uncharacterized protein LOC123381494 isof            211       98     0.266      94      
hsa:574 B melanoma antigen                                          43       91     0.439      41      

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