GFIT result for
aacd
|
GFIT result for
aacd
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| aacd:LWP59_20600 (670 a.a.) |
-- |
K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > aprt:MUY14_19135(655) | 651 | 72.5 | 3178 | 24 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aoi:AORI_5517(678) | 680 | 69.4 | 3082 | 12 | -- | K01971 | ligD | lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amd:AMED_3255(670) | 676 | 69.4 | 3064 | 28 | -- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amm:AMES_3220(670) | 676 | 69.4 | 3064 | 29 | -- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amn:RAM_16560(670) | 676 | 69.4 | 3064 | 32 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amz:B737_3220(670) | 676 | 69.4 | 3064 | 29 | -- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ume:RM788_08230(?) | 668 | 67.2 | 2997 | 0 | -- | - | |||
| > alo:CRK57032(659) | 654 | 68.7 | 2954 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sesp:BN6_34290(708) | 693 | 63.2 | 2817 | 72 | -- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aja:AJAP_07090(433) | 433 | 70.0 | 2016 | 14 | -- | K01971 | ligD | Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nhy:JQS43_02725(615) | 644 | 45.5 | 1488 | 19 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sbae:DSM104329_04323(723) | 673 | 40.9 | 1469 | 11 | -- | lig; DNA ligase | |||
| > bala:DSM104299_02990(808) | 663 | 41.2 | 1431 | 0 | -- | ATP-dependent DNA ligase | |||
| > cros:N8J89_20080(303) | 301 | 70.1 | 1417 | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsol:FSW04_15890(798) | 656 | 40.5 | 1414 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cwo:Cwoe_4716(815) | 672 | 40.2 | 1388 | 14 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > led:BBK82_33360(303) | 299 | 69.6 | 1360 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dco:SAMEA4475696_1756(648) | 663 | 37.9 | 1324 | 1 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kphy:AOZ06_37985(292) | 291 | 67.7 | 1309 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pdx:Psed_4989(683) | 704 | 38.1 | 1306 | 41 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbaj:LRS13_17790(?) | 602 | 42.0 | 1271 | 0 | -- | - | |||
| > amq:AMETH_1315(309) | 300 | 61.3 | 1237 | 5 | -- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aroo:NQK81_13580(305) | 304 | 60.5 | 1236 | 5 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amyb:BKN51_01545(321) | 304 | 60.5 | 1231 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > athm:L1857_09145(306) | 300 | 61.0 | 1226 | 5 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aori:SD37_31830(321) | 304 | 59.9 | 1219 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > arhd:VSH64_15040(?) | 339 | 55.8 | 1208 | 0 | -- | - | |||
| > amyc:CU254_41245(334) | 341 | 55.4 | 1200 | 6 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sen:SACE_3549(302) | 294 | 60.5 | 1167 | 3 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ncx:Nocox_36390(292) | 291 | 60.8 | 1151 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmad:BAY61_28610(301) | 291 | 60.8 | 1147 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kut:JJ691_02400(454) | 296 | 56.8 | 1139 | 7 | -- | K01971 | ligD | DNA polymerase Ligase (LigD); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > parn:NBH00_15315(773) | 666 | 38.1 | 1136 | 7 | -- | ligD; DNA ligase D | |||
| > now:GBF35_44150(290) | 287 | 59.9 | 1130 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > blap:MVA48_01920(311) | 310 | 57.4 | 1129 | 3 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sacc:EYD13_19400(301) | 286 | 59.1 | 1126 | 2 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gob:Gobs_2121(306) | 303 | 58.1 | 1123 | 4 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noa:BKM31_52070(290) | 287 | 59.9 | 1120 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acty:OG774_04885(?) | 337 | 53.4 | 1118 | 0 | -- | - | |||
| > rant:RHODO2019_08180(?) | 301 | 57.8 | 1117 | 0 | -- | - | |||
| > svi:Svir_34930(303) | 289 | 58.5 | 1114 | 0 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ngn:LCN96_49260(290) | 287 | 59.2 | 1111 | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psan:HGN31_00485(805) | 658 | 37.5 | 1111 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sace:GIY23_11510(303) | 295 | 56.9 | 1109 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsd:BLASA_3097(301) | 294 | 59.2 | 1107 | 2 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nfs:OIE67_55075(?) | 287 | 59.9 | 1106 | 0 | -- | - | |||
| > actw:F7P10_31565(301) | 302 | 56.0 | 1104 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amaz:LUW76_36945(302) | 301 | 54.5 | 1099 | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppaf:I8N54_04725(813) | 646 | 35.1 | 1091 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > plk:CIK06_02645(302) | 305 | 56.7 | 1090 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > geo:Geob_0336(829) | 654 | 34.7 | 1087 | 1 | -- | K01971 | ligD | ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmar:MODMU_2076(304) | 303 | 56.8 | 1085 | 2 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acir:OG979_09175(?) | 301 | 53.8 | 1083 | 0 | -- | - | |||
| > qsp:L1F33_02020(836) | 667 | 34.0 | 1077 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afw:Anae109_0939(847) | 671 | 36.2 | 1076 | 78 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amyy:YIM_01445(608) | 610 | 36.2 | 1076 | 11 | -- | K01971 | ligD | ykoU1; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhai:OHB01_04335(?) | 290 | 56.9 | 1076 | 0 | -- | - | |||
| > salo:EF888_15900(806) | 630 | 35.7 | 1074 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cfil:MYF79_27755(669) | 686 | 33.1 | 1072 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mprn:Q3V37_04730(?) | 308 | 54.5 | 1070 | 0 | -- | - | |||
| > yti:FNA67_18405(857) | 634 | 36.6 | 1068 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > elq:Ga0102493_111761(830) | 672 | 35.0 | 1067 | 3 | -- | K01971 | ligD | bifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fap:GR316_03905(812) | 665 | 34.6 | 1066 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hcam:I4484_04370(850) | 671 | 35.9 | 1066 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > htx:EKK97_05265(849) | 667 | 34.9 | 1066 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > spiq:OHA34_30835(?) | 300 | 54.0 | 1066 | 0 | -- | - | |||
| > tsv:DSM104635_00281(819) | 647 | 35.2 | 1066 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ery:CP97_14928(839) | 667 | 34.8 | 1065 | 2 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agra:AGRA3207_005929(297) | 295 | 55.3 | 1063 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sbd:ATN00_05035(834) | 668 | 35.0 | 1063 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccaz:COUCH_37505(303) | 303 | 55.1 | 1061 | 6 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hsx:HNO51_04330(850) | 668 | 35.2 | 1061 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhy:RD110_14845(830) | 637 | 33.8 | 1061 | 2 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pem:OF122_09050(820) | 629 | 34.8 | 1059 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aay:WYH_02746(840) | 639 | 34.9 | 1058 | 1 | -- | K01971 | ligD | ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tbd:Tbd_2247(846) | 642 | 35.2 | 1057 | 2 | -- | K01971 | ligD | DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actn:L083_0502(307) | 309 | 53.1 | 1055 | 2 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > paut:Pdca_34170(669) | 429 | 46.2 | 1055 | 132 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hsv:HNO53_04325(852) | 670 | 34.8 | 1054 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > deq:XM25_14700(857) | 638 | 36.4 | 1053 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhaw:RMN56_09190(?) | 308 | 53.9 | 1053 | 0 | -- | - | |||
| > pcon:B0A89_10545(824) | 621 | 35.6 | 1052 | 15 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sfav:PL335_09850(819) | 663 | 35.3 | 1052 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > scu:SCE1572_21330(687) | 685 | 34.6 | 1051 | 47 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tmd:KUV46_12140(829) | 658 | 35.4 | 1050 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > vma:VAB18032_06520(304) | 308 | 53.2 | 1050 | 4 | -- | K01971 | ligD | DNA polymerase ligd, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cfh:C1707_22550(880) | 670 | 34.3 | 1049 | 10 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hhf:E2K99_11915(857) | 694 | 33.6 | 1049 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mtem:GCE86_28015(304) | 308 | 53.6 | 1048 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acta:C1701_04545(302) | 301 | 52.8 | 1047 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aflv:QQW98_07625(?) | 666 | 34.2 | 1047 | 0 | -- | - | |||
| > mchl:PVK74_23530(304) | 308 | 53.6 | 1047 | 3 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > vap:Vapar_1660(847) | 650 | 34.2 | 1046 | 9 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kfl:Kfla_5357(308) | 311 | 53.4 | 1045 | 3 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mau:Micau_0485(302) | 306 | 53.3 | 1045 | 3 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nre:BES08_17875(848) | 621 | 33.7 | 1045 | 3 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mil:ML5_0459(302) | 306 | 53.3 | 1044 | 3 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mtua:CSH63_22810(304) | 308 | 52.9 | 1044 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nov:TQ38_017685(845) | 637 | 33.8 | 1044 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rid:RIdsm_01880(808) | 629 | 35.5 | 1044 | 5 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |