GFIT result for
vma
|
GFIT result for
vma
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| vma:VAB18032_06520 (304 a.a.) |
-- |
K01971 | ligD | DNA polymerase ligd, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mcra:ID554_10630(303) | 303 | 89.1 | 1851 | 3 | <> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhaw:RMN56_09190(?) | 304 | 87.2 | 1824 | 0 | -- | - | |||
| > ver:HUT12_02945(304) | 302 | 87.4 | 1813 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mtem:GCE86_28015(304) | 304 | 86.5 | 1811 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mchl:PVK74_23530(304) | 304 | 85.5 | 1810 | 3 | <> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > meno:Jiend_23570(304) | 302 | 88.4 | 1805 | 2 | <- | K01971 | ligD | lig_1; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > micb:MicB006_0497(304) | 302 | 86.1 | 1799 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mtua:CSH63_22810(304) | 304 | 84.9 | 1794 | 3 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mfeu:H1D33_09215(?) | 302 | 86.1 | 1793 | 0 | -- | - | |||
| > mil:ML5_0459(302) | 302 | 85.8 | 1793 | 3 | <- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mau:Micau_0485(302) | 302 | 85.4 | 1785 | 3 | <- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mich:FJK98_02715(302) | 302 | 84.1 | 1750 | 6 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > saq:Sare_4351(303) | 302 | 84.1 | 1742 | 4 | <- | K01971 | ligD | DNA polymerase LigD polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mprn:Q3V37_04730(?) | 304 | 81.9 | 1730 | 0 | -- | - | |||
| > mcab:HXZ27_02525(304) | 299 | 83.6 | 1720 | 7 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msag:GCM10017556_30570(305) | 303 | 82.8 | 1713 | 3 | <- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > stp:Strop_3967(302) | 300 | 82.7 | 1686 | 4 | <- | K01971 | ligD | DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > plab:C6361_19375(305) | 301 | 76.7 | 1573 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > plat:C6W10_29060(303) | 299 | 76.6 | 1564 | 4 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pry:Prubr_20440(304) | 303 | 76.2 | 1559 | 2 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > plk:CIK06_02645(302) | 303 | 75.2 | 1537 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfla:Pflav_075310(298) | 303 | 74.3 | 1535 | 5 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psuu:Psuf_037730(300) | 306 | 72.5 | 1513 | 4 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccaz:COUCH_37505(303) | 302 | 71.5 | 1485 | 6 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aou:ACTOB_000311(?) | 302 | 71.9 | 1482 | 0 | -- | - | |||
| > actr:Asp14428_42580(300) | 302 | 71.2 | 1476 | 3 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ams:AMIS_3580(309) | 299 | 71.9 | 1469 | 4 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aih:Aiant_46050(320) | 302 | 69.5 | 1461 | 5 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afs:AFR_02065(301) | 302 | 70.9 | 1458 | 5 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actn:L083_0502(307) | 299 | 70.9 | 1455 | 2 | <- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actl:L3i22_003140(302) | 302 | 69.5 | 1428 | 9 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > asic:Q0Z83_084580(?) | 303 | 69.3 | 1425 | 0 | -- | - | |||
| > acts:ACWT_0404(301) | 302 | 66.9 | 1387 | 5 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ase:ACPL_519(301) | 302 | 66.9 | 1387 | 5 | <- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nhy:JQS43_02725(615) | 297 | 69.0 | 1382 | 19 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dvc:Dvina_03360(295) | 296 | 69.9 | 1337 | 7 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dmat:Dmats_03040(295) | 296 | 69.6 | 1332 | 7 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dros:Drose_02850(295) | 296 | 65.2 | 1292 | 6 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > daur:Daura_02915(287) | 269 | 70.3 | 1283 | 8 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dfu:Dfulv_03845(295) | 296 | 64.2 | 1282 | 5 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > atl:Athai_68190(299) | 307 | 63.8 | 1257 | 5 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actw:F7P10_31565(301) | 302 | 63.2 | 1252 | 2 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amaz:LUW76_36945(302) | 307 | 60.9 | 1242 | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > spiq:OHA34_30835(?) | 307 | 62.5 | 1242 | 0 | -- | - | |||
| > aser:Asera_07590(301) | 310 | 62.6 | 1239 | 5 | <- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agra:AGRA3207_005929(297) | 302 | 64.2 | 1222 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sacc:EYD13_19400(301) | 293 | 61.4 | 1213 | 2 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhai:OHB01_04335(?) | 296 | 63.5 | 1208 | 0 | -- | - | |||
| > tcu:Tcur_1207(302) | 304 | 59.5 | 1187 | 1 | <- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > now:GBF35_44150(290) | 289 | 62.3 | 1183 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ncx:Nocox_36390(292) | 295 | 63.1 | 1182 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > svi:Svir_34930(303) | 293 | 59.4 | 1182 | 0 | <- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noa:BKM31_52070(290) | 289 | 63.7 | 1175 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aroo:NQK81_13580(305) | 309 | 57.0 | 1171 | 5 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmad:BAY61_28610(301) | 293 | 59.4 | 1164 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aja:AJAP_30100(305) | 309 | 57.3 | 1161 | 5 | <- | K01971 | ligD | Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aoi:AORI_1871(305) | 309 | 57.0 | 1161 | 7 | <- | K01971 | ligD | lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kphy:AOZ06_15235(292) | 285 | 61.1 | 1159 | 6 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ngn:LCN96_49260(290) | 289 | 62.6 | 1152 | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > alo:CRK60827(304) | 305 | 57.7 | 1148 | 5 | <- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actq:OG417_42425(?) | 304 | 58.9 | 1147 | 0 | -- | - | |||
| > tbi:Tbis_2991(293) | 292 | 59.9 | 1139 | 1 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amyb:BKN51_01545(321) | 309 | 55.3 | 1138 | 5 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aori:SD37_31830(321) | 309 | 54.7 | 1127 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > led:BBK82_36770(286) | 289 | 61.2 | 1121 | 2 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sna:Snas_2802(302) | 307 | 53.7 | 1110 | 1 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nmes:H9L09_03960(301) | 300 | 56.0 | 1107 | 2 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amq:AMETH_1315(309) | 307 | 54.4 | 1105 | 5 | -- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > athm:L1857_09145(306) | 307 | 54.7 | 1103 | 5 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nro:K8W59_04430(300) | 300 | 56.0 | 1097 | 2 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nsn:EXE58_02445(294) | 292 | 56.2 | 1096 | 2 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > strc:AA958_07440(307) | 309 | 54.7 | 1087 | 5 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > blap:MVA48_01920(311) | 290 | 56.9 | 1086 | 3 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kut:JJ691_02400(454) | 300 | 55.3 | 1083 | 7 | -- | K01971 | ligD | DNA polymerase Ligase (LigD); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sace:GIY23_11510(303) | 306 | 55.9 | 1082 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ume:RM788_08230(?) | 308 | 54.2 | 1082 | 0 | -- | - | |||
| > aprt:MUY14_19135(655) | 305 | 55.4 | 1080 | 24 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cros:N8J89_22795(306) | 309 | 54.4 | 1080 | 2 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kfl:Kfla_5357(308) | 305 | 54.1 | 1079 | 3 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sen:SACE_3549(302) | 301 | 55.1 | 1079 | 3 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ksl:OG809_01715(?) | 306 | 52.9 | 1075 | 0 | -- | - | |||
| > srug:F0345_20605(300) | 296 | 55.7 | 1075 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kqi:F1D05_11260(308) | 305 | 53.8 | 1073 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acta:C1701_04545(302) | 296 | 55.7 | 1070 | 1 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aacd:LWP59_06255(306) | 307 | 55.7 | 1068 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fal:FRAAL6053(311) | 293 | 56.3 | 1060 | 2 | -- | K01971 | ligD | conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fri:FraEuI1c_0751(346) | 293 | 56.7 | 1060 | 13 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmar:MODMU_2076(304) | 292 | 54.8 | 1060 | 2 | <- | K01971 | ligD | DNA polymerase LigD, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noy:EXE57_16735(301) | 297 | 55.6 | 1060 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > npc:KUV85_08740(305) | 298 | 55.4 | 1058 | 2 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acp:A2cp1_1020(313) | 297 | 54.9 | 1055 | 3 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noq:LN652_07755(297) | 292 | 55.5 | 1055 | 3 | <- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sesp:BN6_42920(342) | 289 | 57.4 | 1052 | 12 | <- | K01971 | ligD | putative DNA polymerase, LigD family; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsd:BLASA_3097(301) | 289 | 54.7 | 1049 | 2 | <- | K01971 | ligD | DNA polymerase LigD, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psim:KR76_09225(305) | 299 | 53.8 | 1048 | 2 | <- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > naro:CFH99_08760(305) | 299 | 54.5 | 1046 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ndk:I601_2209(302) | 301 | 54.5 | 1046 | 2 | <- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nca:Noca_1237(304) | 297 | 54.5 | 1045 | 4 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ncq:K6T13_13310(301) | 300 | 53.7 | 1044 | 2 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > stui:GCM10017668_48320(293) | 295 | 54.2 | 1043 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |