GFIT result for
frn
|
GFIT result for
frn
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| frn:F1C15_03775 (888 a.a.) |
-- |
K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > frp:AX769_10440(848) | 903 | 69.4 | 4092 | 3 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fsb:GCM10025867_35180(819) | 886 | 69.6 | 4079 | 0 | <- | ATP-dependent DNA ligase | |||
| > cub:BJK06_06465(840) | 893 | 60.2 | 3457 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hea:HL652_15460(895) | 903 | 59.4 | 3455 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccit:QPK07_01675(?) | 899 | 59.7 | 3442 | 0 | -- | - | |||
| > cug:C1N91_01355(840) | 895 | 60.2 | 3434 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cum:NI26_01570(842) | 893 | 60.0 | 3433 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cpha:FGI33_02765(839) | 897 | 60.5 | 3386 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccaf:FGD68_12820(842) | 897 | 60.1 | 3377 | 13 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > czh:H9X71_10415(835) | 897 | 60.1 | 3351 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cprt:FIC82_009535(903) | 911 | 58.1 | 3345 | 65 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cet:B8281_10560(894) | 906 | 58.3 | 3343 | 77 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cmh:VO01_09615(836) | 897 | 59.8 | 3343 | 13 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccap:AES38_10105(833) | 897 | 60.1 | 3341 | 16 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cmi:CMM_2074(832) | 892 | 59.9 | 3337 | 10 | -- | K01971 | ligD | conserved hypothetical protein/ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gyu:FE374_11970(911) | 911 | 57.7 | 3335 | 14 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lxl:KDY119_02260(890) | 924 | 58.7 | 3314 | 20 | -- | K01971 | ligD | ligD; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hum:DVJ78_06110(887) | 922 | 58.4 | 3313 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sald:FVA74_07970(826) | 891 | 59.1 | 3310 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cmc:CMN_02036(834) | 897 | 59.5 | 3308 | 9 | -- | K01971 | ligD | ligD; Cmm ortholog CMM_2074; Cms ortholog CMS_1156 (pseudogene); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cphy:B5808_14620(902) | 935 | 57.6 | 3308 | 14 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > leif:HF024_11835(820) | 891 | 58.8 | 3299 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aog:LH407_01905(?) | 892 | 57.4 | 3289 | 0 | -- | - | |||
| > cceu:CBR64_00560(865) | 901 | 58.4 | 3280 | 23 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > oek:FFI11_015915(869) | 913 | 57.8 | 3267 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > heh:L3i23_09020(858) | 900 | 58.6 | 3265 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gln:F1C58_02520(835) | 886 | 57.7 | 3250 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ageg:MUG94_00250(875) | 919 | 56.8 | 3235 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ajg:KKR91_00265(857) | 910 | 56.8 | 3229 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > asun:KG104_00265(891) | 927 | 56.3 | 3228 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lse:F1C12_01125(818) | 897 | 57.7 | 3221 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > azx:N2K95_00250(?) | 913 | 55.6 | 3199 | 0 | -- | - | |||
| > ajr:N2K98_00245(?) | 914 | 55.1 | 3172 | 0 | -- | - | |||
| > agx:AGREI_2201(797) | 892 | 58.3 | 3159 | 3 | -- | K01971 | ligD | ligD; DNA repair polymerase / 3'-phosphoesterase / DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > suba:LQ955_03960(859) | 905 | 55.6 | 3151 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ske:Sked_13060(852) | 906 | 56.7 | 3137 | 6 | -- | K01971 | ligD | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mant:BHD05_13590(826) | 893 | 57.4 | 3131 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > azh:MUK71_00245(863) | 897 | 54.7 | 3129 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acao:NF551_00265(868) | 907 | 54.7 | 3127 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ako:N9A08_00280(?) | 908 | 55.1 | 3127 | 0 | -- | - | |||
| > salc:C2138_08360(812) | 887 | 56.0 | 3123 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gez:FE251_10770(831) | 908 | 55.7 | 3102 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aagi:NCTC2676_1_00054(817) | 894 | 56.2 | 3091 | 5 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acry:AC20117_07560(847) | 904 | 54.3 | 3061 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > asuf:MNQ99_00735(847) | 900 | 54.6 | 3056 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gry:D7I44_10885(784) | 893 | 56.0 | 3046 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rfs:C1I64_14985(856) | 906 | 57.0 | 3045 | 28 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > naei:GCM126_35640(839) | 898 | 54.0 | 3019 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > iva:Isova_2011(853) | 916 | 54.5 | 3013 | 5 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > huw:FPZ11_01545(810) | 897 | 55.3 | 3011 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > myl:C3E77_07890(833) | 899 | 54.4 | 3011 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > subt:KPL76_13340(941) | 956 | 52.2 | 2995 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rtn:A6122_2623(831) | 892 | 54.8 | 2940 | 10 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mph:MLP_04810(812) | 900 | 52.8 | 2936 | 6 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mteu:R3I42_08915(?) | 954 | 53.2 | 2935 | 0 | -- | - | |||
| > aarc:G127AT_09445(840) | 896 | 54.0 | 2933 | 29 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > eke:EK0264_06360(811) | 897 | 52.0 | 2930 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rte:GSU10_01235(837) | 887 | 54.5 | 2915 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bhq:BRM3_02145(927) | 923 | 50.2 | 2908 | 10 | -- | ATP-dependent DNA ligase | |||
| > mik:FOE78_14435(859) | 901 | 51.9 | 2905 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cig:E7744_02670(885) | 908 | 53.9 | 2900 | 158 | -- | ATP-dependent DNA ligase | |||
| > satk:SA2016_3491(884) | 918 | 51.6 | 2886 | 29 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psul:AU252_08335(841) | 898 | 51.8 | 2885 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhal:LQF10_10875(834) | 894 | 52.0 | 2883 | 10 | -- | ATP-dependent DNA ligase | |||
| > arty:AHiyo4_04140(840) | 898 | 51.9 | 2880 | 6 | -- | K01971 | ligD | putative DNA ligase-like protein Mb0963; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ach:Achl_0520(828) | 888 | 52.3 | 2877 | 6 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pdel:JCQ34_01790(?) | 902 | 51.3 | 2869 | 0 | -- | - | |||
| > micg:GJV80_05825(842) | 907 | 49.9 | 2861 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aod:Q8Z05_09560(?) | 904 | 51.1 | 2846 | 0 | -- | - | |||
| > arm:ART_3548(869) | 897 | 51.7 | 2842 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > apn:Asphe3_04250(842) | 883 | 51.6 | 2841 | 11 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD ligase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > art:Arth_0294(845) | 904 | 51.8 | 2839 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD ligase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psni:NIBR502771_03085(825) | 899 | 51.9 | 2839 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > halt:IM660_11265(860) | 898 | 51.2 | 2832 | 21 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bly:A2T55_13945(852) | 910 | 51.1 | 2826 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > arq:BWQ92_08275(859) | 905 | 51.0 | 2816 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bki:M4486_18050(846) | 921 | 50.8 | 2812 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cart:PA27867_1555(879) | 916 | 52.1 | 2812 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccyc:SCMU_35490(899) | 905 | 50.9 | 2811 | 21 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > xya:ET471_17040(833) | 915 | 53.1 | 2810 | 19 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aeb:C6I20_14925(791) | 895 | 52.1 | 2809 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bspo:L1F31_14400(831) | 909 | 52.7 | 2806 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > plap:EAO79_14770(814) | 901 | 52.6 | 2804 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > blin:BLSMQ_3103(853) | 909 | 50.6 | 2791 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > asoi:MTP13_02610(838) | 891 | 51.6 | 2785 | 59 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agy:ATC03_01400(835) | 906 | 52.1 | 2784 | 12 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > brx:BH708_17365(857) | 911 | 50.2 | 2784 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gcr:GcLGCM259_2883(833) | 915 | 50.1 | 2780 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aru:ASPU41_07235(830) | 885 | 51.2 | 2778 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bhh:Bra3105_14500(862) | 925 | 49.5 | 2776 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kse:Ksed_19790(878) | 937 | 52.4 | 2773 | 9 | -- | K01971 | ligD | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > arth:C3B78_01940(830) | 895 | 51.3 | 2769 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > xce:Xcel_2233(858) | 923 | 51.6 | 2769 | 37 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agm:DCE93_01325(821) | 907 | 51.0 | 2761 | 12 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > artp:E5206_01825(828) | 892 | 51.6 | 2744 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cry:B7495_07570(833) | 898 | 51.9 | 2744 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ido:I598_0187(857) | 910 | 50.8 | 2743 | 84 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > arn:CGK93_01640(852) | 918 | 49.7 | 2741 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rsua:LQF12_09665(830) | 891 | 50.8 | 2739 | 18 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > brr:C1N80_00660(837) | 898 | 49.4 | 2736 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |