GFIT result for ske |
[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
ske:Sked_13060 (852 a.a.) |
--  |
K01971  | ligD  | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
---|---|---|---|---|---|---|---|---|---|
> oek:FFI11_015915(869) | 891 | 59.8 | 3253 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> aog:LH407_01905(?) | 847 | 58.8 | 3233 | 0 | -- | - | |||
> cceu:CBR64_00560(865) | 879 | 58.8 | 3197 | 23 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> iva:Isova_2011(853) | 864 | 59.1 | 3173 | 5 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sald:FVA74_07970(826) | 850 | 59.1 | 3161 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> hea:HL652_15460(895) | 901 | 57.8 | 3157 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cprt:FIC82_009535(903) | 917 | 57.7 | 3156 | 65 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ccaf:FGD68_12820(842) | 862 | 58.5 | 3147 | 13 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cpha:FGI33_02765(839) | 860 | 58.6 | 3138 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> frn:F1C15_03775(888) | 906 | 56.7 | 3137 | 18 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cmh:VO01_09615(836) | 861 | 58.4 | 3133 | 13 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cmi:CMM_2074(832) | 853 | 58.9 | 3133 | 10 | -- | K01971 | ligD | conserved hypothetical protein/ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ccap:AES38_10105(833) | 855 | 58.7 | 3126 | 16 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cet:B8281_10560(894) | 908 | 57.2 | 3122 | 77 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> czh:H9X71_10415(835) | 858 | 58.3 | 3117 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> aagi:NCTC2676_1_00054(817) | 847 | 58.7 | 3109 | 5 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cmc:CMN_02036(834) | 858 | 57.9 | 3107 | 9 | -- | K01971 | ligD | ligD; Cmm ortholog CMM_2074; Cms ortholog CMS_1156 (pseudogene); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> myl:C3E77_07890(833) | 854 | 57.4 | 3105 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mant:BHD05_13590(826) | 853 | 59.4 | 3099 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> fsb:GCM10025867_35180(819) | 857 | 58.2 | 3095 | 0 | -- | ATP-dependent DNA ligase | |||
> salc:C2138_08360(812) | 844 | 57.7 | 3093 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> asuf:MNQ99_00735(847) | 864 | 56.2 | 3091 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ccit:QPK07_01675(?) | 859 | 56.8 | 3084 | 0 | -- | - | |||
> gln:F1C58_02520(835) | 848 | 57.8 | 3067 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ido:I598_0187(857) | 867 | 57.4 | 3062 | 84 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cug:C1N91_01355(840) | 867 | 57.2 | 3053 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> suba:LQ955_03960(859) | 868 | 57.0 | 3049 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> leif:HF024_11835(820) | 847 | 57.1 | 3046 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ako:N9A08_00280(?) | 873 | 56.2 | 3031 | 0 | -- | - | |||
> agx:AGREI_2201(797) | 848 | 59.0 | 3027 | 3 | -- | K01971 | ligD | ligD; DNA repair polymerase / 3'-phosphoesterase / DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cub:BJK06_06465(840) | 864 | 57.2 | 3025 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cum:NI26_01570(842) | 863 | 56.5 | 3025 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ageg:MUG94_00250(875) | 889 | 56.9 | 3024 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bgg:CFK41_09415(857) | 864 | 54.4 | 3020 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> azh:MUK71_00245(863) | 875 | 56.7 | 3015 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> brx:BH708_17365(857) | 884 | 54.9 | 3014 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> lse:F1C12_01125(818) | 850 | 56.6 | 3011 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> heh:L3i23_09020(858) | 871 | 56.4 | 3008 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> frp:AX769_10440(848) | 863 | 55.9 | 2999 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ajg:KKR91_00265(857) | 866 | 57.2 | 2998 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> acao:NF551_00265(868) | 879 | 55.3 | 2997 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> asun:KG104_00265(891) | 899 | 55.5 | 2997 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> naei:GCM126_35640(839) | 856 | 57.1 | 2992 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bhh:Bra3105_14500(862) | 873 | 54.2 | 2975 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> gyu:FE374_11970(911) | 902 | 55.0 | 2972 | 14 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> hum:DVJ78_06110(887) | 909 | 55.2 | 2971 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cart:PA27867_1555(879) | 876 | 55.7 | 2962 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cphy:B5808_14620(902) | 923 | 55.1 | 2955 | 14 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cry:B7495_07570(833) | 857 | 56.2 | 2946 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bki:M4486_18050(846) | 872 | 54.6 | 2944 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> azx:N2K95_00250(?) | 895 | 55.1 | 2937 | 0 | -- | - | |||
> ajr:N2K98_00245(?) | 885 | 54.7 | 2931 | 0 | -- | - | |||
> acry:AC20117_07560(847) | 879 | 54.7 | 2925 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> brr:C1N80_00660(837) | 867 | 54.2 | 2916 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> subt:KPL76_13340(941) | 942 | 52.0 | 2899 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> gez:FE251_10770(831) | 857 | 55.1 | 2898 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bfa:Bfae_07110(847) | 863 | 54.0 | 2895 | 6 | -- | K01971 | ligD | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> rfs:C1I64_14985(856) | 870 | 54.9 | 2894 | 28 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mik:FOE78_14435(859) | 875 | 53.5 | 2893 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> rtn:A6122_2623(831) | 850 | 55.8 | 2891 | 10 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> rte:GSU10_01235(837) | 848 | 55.2 | 2885 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> micg:GJV80_05825(842) | 870 | 52.6 | 2868 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> lxl:KDY119_02260(890) | 906 | 53.4 | 2853 | 20 | -- | K01971 | ligD | ligD; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> eke:EK0264_06360(811) | 846 | 54.3 | 2848 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> gcr:GcLGCM259_2883(833) | 862 | 52.7 | 2843 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> brz:CFK38_15900(827) | 859 | 52.7 | 2814 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> arm:ART_3548(869) | 854 | 53.0 | 2812 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> aeb:C6I20_14925(791) | 848 | 54.1 | 2805 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bly:A2T55_13945(852) | 866 | 52.3 | 2802 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bhq:BRM3_02145(927) | 941 | 49.7 | 2800 | 10 | -- | ATP-dependent DNA ligase | |||
> xce:Xcel_2233(858) | 891 | 52.9 | 2797 | 37 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> xya:ET471_17040(833) | 869 | 54.7 | 2797 | 19 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> aer:AERYTH_15445(869) | 893 | 53.6 | 2789 | 21 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> aru:ASPU41_07235(830) | 855 | 53.9 | 2786 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mph:MLP_04810(812) | 854 | 52.9 | 2782 | 6 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> blin:BLSMQ_3103(853) | 875 | 51.8 | 2781 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> paey:KUF55_09145(837) | 861 | 53.8 | 2781 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> pnv:JMY29_01435(856) | 862 | 52.2 | 2775 | 10 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> arx:ARZXY2_3628(839) | 867 | 52.9 | 2771 | 5 | -- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bri:FDF13_02665(814) | 858 | 54.3 | 2771 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> arz:AUT26_01215(839) | 867 | 52.9 | 2766 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> huw:FPZ11_01545(810) | 861 | 53.0 | 2765 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> rhal:LQF10_10875(834) | 856 | 51.3 | 2765 | 10 | -- | ATP-dependent DNA ligase | |||
> arth:C3B78_01940(830) | 867 | 53.2 | 2760 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> glu:F0M17_15000(832) | 857 | 52.0 | 2748 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> arn:CGK93_01640(852) | 870 | 51.5 | 2747 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> gnc:QQS42_15435(832) | 857 | 52.0 | 2747 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> plap:EAO79_14770(814) | 852 | 54.0 | 2747 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bspo:L1F31_14400(831) | 868 | 52.3 | 2745 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> apn:Asphe3_04250(842) | 866 | 52.3 | 2744 | 11 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD ligase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> psni:NIBR502771_03085(825) | 856 | 52.3 | 2742 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> gry:D7I44_10885(784) | 837 | 52.4 | 2741 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> satk:SA2016_3491(884) | 907 | 51.0 | 2740 | 29 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> pok:SMD14_02170(?) | 850 | 53.1 | 2735 | 0 | -- | - | |||
> arr:ARUE_c02810(852) | 868 | 51.8 | 2732 | 7 | -- | K01971 | ligD | putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> arq:BWQ92_08275(859) | 867 | 52.2 | 2731 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> cig:E7744_02670(885) | 895 | 52.0 | 2726 | 158 | -- | ATP-dependent DNA ligase | |||
> blut:EW640_05470(809) | 846 | 51.9 | 2725 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> gmi:NMP99_15560(826) | 847 | 51.8 | 2721 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> gmy:XH9_10220(840) | 857 | 51.5 | 2719 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] |