KEGG   PATHWAY: aoce04620
Entry
aoce04620                   Pathway                                
Name
Toll-like receptor signaling pathway - Amphiprion ocellaris (clown anemonefish)
Description
Specific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors identified as homologs of Toll in Drosophila. Mammalian TLRs are expressed on innate immune cells, such as macrophages and dendritic cells, and respond to the membrane components of Gram-positive or Gram-negative bacteria. Pathogen recognition by TLRs provokes rapid activation of innate immunity by inducing production of proinflammatory cytokines and upregulation of costimulatory molecules. TLR signaling pathways are separated into two groups: a MyD88-dependent pathway that leads to the production of proinflammatory cytokines with quick activation of NF-{kappa}B and MAPK, and a MyD88-independent pathway associated with the induction of IFN-beta and IFN-inducible genes, and maturation of dendritic cells with slow activation of NF-{kappa}B and MAPK.
Class
Organismal Systems; Immune system
Pathway map
aoce04620  Toll-like receptor signaling pathway
aoce04620

Organism
Amphiprion ocellaris (clown anemonefish) [GN:aoce]
Gene
111562942  [KO:K12964]
111563285  [KO:K11220]
111564211  map2k7; dual specificity mitogen-activated protein kinase kinase 7 isoform X1 [KO:K04431] [EC:2.7.12.2]
111564459  bpifcl; bactericidal permeability-increasing protein [KO:K05399]
111564651  [KO:K04433] [EC:2.7.12.2]
111565366  mapk3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
111565824  mapk12b; mitogen-activated protein kinase 12b [KO:K04441] [EC:2.7.11.24]
111565847  mapk11; mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
111565947  myd88; myeloid differentiation primary response protein MyD88 [KO:K04729]
111566069  map3k7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
111566093  akt2; RAC-beta serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
111566221  cd40; tumor necrosis factor receptor superfamily member 5 isoform X1 [KO:K03160]
111566565  ikbke; inhibitor of nuclear factor kappa-B kinase subunit epsilon [KO:K07211] [EC:2.7.11.10]
111566617  stat2; signal transducer and activator of transcription 2 isoform X1 [KO:K11221]
111566717  si:dkey-88e18.2; interleukin-12 subunit beta [KO:K05425]
111566758  pik3r3b; phosphoinositide-3-kinase, regulatory subunit 3b (gamma) isoform X1 [KO:K02649]
111566849  pik3r2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
111566984  mapk14a; mitogen-activated protein kinase 14A isoform X1 [KO:K04441] [EC:2.7.11.24]
111567434  il12bb; interleukin-12 subunit beta [KO:K05425]
111567460  [KO:K04467] [EC:2.7.11.10]
111567655  ticam1; TIR domain-containing adapter molecule 1 [KO:K05842]
111567780  irf5; interferon regulatory factor 5 [KO:K09446]
111567845  [KO:K10030]
111567847  [KO:K10030]
111568133  map2k2a; dual specificity mitogen-activated protein kinase kinase 2a [KO:K04369] [EC:2.7.12.2]
111568701  ripk1l; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
111569137  [KO:K02649]
111569196  tirap; toll/interleukin-1 receptor domain-containing adapter protein [KO:K05403]
111569218  ctss1; cathepsin S, ortholog 1 isoform X1 [KO:K01371] [EC:3.4.22.38]
111569535  mapk9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
111569702  pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922] [EC:2.7.1.153]
111569910  irak4; interleukin-1 receptor-associated kinase 4 [KO:K04733] [EC:2.7.11.1]
111570511  akt1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
111570784  [KO:K05414]
111570786  [KO:K05414]
111571002  traf6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
111571049  map3k8; mitogen-activated protein kinase kinase kinase 8 [KO:K04415] [EC:2.7.11.25]
111571631  ctsk; cathepsin K [KO:K01371] [EC:3.4.22.38]
111571645  tlr18; toll-like receptor 18 [KO:K10159]
111572155  tlr1; toll-like receptor 1 [KO:K05398]
111572311  map2k2b; dual specificity mitogen-activated protein kinase kinase 2b [KO:K04369] [EC:2.7.12.2]
111572427  stat1a; signal transducer and activator of transcription 1a isoform X4 [KO:K11220]
111572496  map2k4b; dual specificity mitogen-activated protein kinase kinase 4b isoform X1 [KO:K04430] [EC:2.7.12.2]
111572700  mapk13; mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
111572772  zmp:0000001127; interleukin-12 subunit alpha [KO:K05406]
111573164  map2k1; dual specificity mitogen-activated protein kinase kinase 1 isoform X1 [KO:K04368] [EC:2.7.12.2]
111573373  pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922] [EC:2.7.1.153]
111573943  [KO:K02649]
111574392  tlr9; toll-like receptor 9 [KO:K05404]
111574573  fosaa; protein c-Fos isoform X1 [KO:K04379]
111574819  tyk2; non-receptor tyrosine-protein kinase TYK2 [KO:K11219] [EC:2.7.10.2]
111574864  map2k4a; dual specificity mitogen-activated protein kinase kinase 4a isoform X1 [KO:K04430] [EC:2.7.12.2]
111575173  tnfa; tumor necrosis factor a (TNF superfamily, member 2) [KO:K03156]
111575366  [KO:K04392]
111575648  mapk10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
111576185  [KO:K04392]
111576450  traf3; TNF receptor-associated factor 3 [KO:K03174]
111576738  tbk1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
111577292  ikbkb; inhibitor of nuclear factor kappa-B kinase subunit beta [KO:K07209] [EC:2.7.11.10]
111577431  mapk8a; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
111577530  jun; transcription factor AP-1 isoform X1 [KO:K04448]
111577551  [KO:K04734]
111577584  tab1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1 [KO:K04403]
111578164  tab2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404]
111578326  mapk1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
111579085  tnfb; tumor necrosis factor b (TNF superfamily, member 2) [KO:K03156]
111580213  [KO:K10030]
111580399  [KO:K04519]
111581166  akt3a; RAC-gamma serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
111581409  [KO:K04467] [EC:2.7.11.10]
111581473  [KO:K00922] [EC:2.7.1.153]
111581655  akt3b; RAC-gamma serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
111581711  nfkbiab; nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [KO:K04734]
111582017  ikbkg; NF-kappa-B essential modulator isoform X1 [KO:K07210]
111582047  jak1; tyrosine-protein kinase JAK1 [KO:K11217] [EC:2.7.10.2]
111582355  mapk8b; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
111582380  pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
111582710  rela; transcription factor p65 isoform X1 [KO:K04735]
111582915  tlr3; toll-like receptor 3 isoform X1 [KO:K05401]
111583367  [KO:K04379]
111583368  [KO:K04379]
111583413  [KO:K10170]
111583414  tlr7; toll-like receptor 7 [KO:K05404]
111583532  fadd; protein FADD [KO:K02373]
111583634  [KO:K10169]
111583748  nfkb1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
111583887  [KO:K04519]
111584372  irf7; interferon regulatory factor 7 [KO:K09447]
111584424  [KO:K04456] [EC:2.7.11.1]
111584600  irf3; interferon regulatory factor 3 isoform X2 [KO:K05411]
111584762  tnfrsf18; tumor necrosis factor receptor superfamily member 18 [KO:K03160]
111585477  map2k6; dual specificity mitogen-activated protein kinase kinase 6 [KO:K04433] [EC:2.7.12.2]
111585594  irak1; interleukin-1 receptor-associated kinase 1 isoform X1 [KO:K04730] [EC:2.7.11.1]
111586024  zgc:158659; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
111586360  casp10; caspase-8 [KO:K04398] [EC:3.4.22.61]
111586437  tollip; toll-interacting protein [KO:K05402]
111586854  tlr2; toll-like receptor 2 isoform X1 [KO:K10159]
111586917  zgc:171775; STKc_p38 domain-containing protein [KO:K04441] [EC:2.7.11.24]
111587052  [KO:K02649]
111587627  [KO:K04448]
111587724  [KO:K10030]
111587875  mapk14b; mitogen-activated protein kinase 14B isoform X1 [KO:K04441] [EC:2.7.11.24]
111588038  il12ba; interleukin 12Ba isoform X1 [KO:K05425]
111588089  [KO:K04398] [EC:3.4.22.61]
111588095  casp8; caspase-8 [KO:K04398] [EC:3.4.22.61]
111588107  [KO:K04398] [EC:3.4.22.61]
111588460  [KO:K05131]
111588464  [KO:K00922] [EC:2.7.1.153]
111588622  [KO:K05131]
111589175  mapk12a; mitogen-activated protein kinase 12 isoform X1 [KO:K04441] [EC:2.7.11.24]
129348407  [KO:K04456] [EC:2.7.11.1]
Reference
  Authors
Kawai T, Akira S.
  Title
TLR signaling.
  Journal
Semin Immunol 19:24-32 (2007)
DOI:10.1016/j.smim.2006.12.004
Reference
  Authors
O'Neill LA, Bowie AG.
  Title
The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling.
  Journal
Nat Rev Immunol 7:353-64 (2007)
DOI:10.1038/nri2079
Reference
  Authors
Honda K, Taniguchi T.
  Title
IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors.
  Journal
Nat Rev Immunol 6:644-58 (2006)
DOI:10.1038/nri1900
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and Type I interferons.
  Journal
J Biol Chem 282:15319-23 (2007)
DOI:10.1074/jbc.R700009200
Reference
  Authors
Akira S, Uematsu S, Takeuchi O.
  Title
Pathogen recognition and innate immunity.
  Journal
Cell 124:783-801 (2006)
DOI:10.1016/j.cell.2006.02.015
Reference
  Authors
Yamamoto M, Takeda K, Akira S.
  Title
TIR domain-containing adaptors define the specificity of TLR signaling.
  Journal
Mol Immunol 40:861-8 (2004)
DOI:10.1016/j.molimm.2003.10.006
Reference
  Authors
Means TK, Hayashi F, Smith KD, Aderem A, Luster AD.
  Title
The Toll-like receptor 5 stimulus bacterial flagellin induces maturation and chemokine production in human dendritic cells.
  Journal
J Immunol 170:5165-75 (2003)
DOI:10.4049/jimmunol.170.10.5165
Reference
  Authors
Aderem A, Smith KD.
  Title
A systems approach to dissecting immunity and inflammation.
  Journal
Semin Immunol 16:55-67 (2004)
DOI:10.1016/j.smim.2003.10.002
Reference
  Authors
Banerjee A, Gerondakis S.
  Title
Coordinating TLR-activated signaling pathways in cells of the immune system.
  Journal
Immunol Cell Biol 85:420-4 (2007)
DOI:10.1038/sj.icb.7100098
Reference
  Authors
Loniewski KJ, Patial S, Parameswaran N.
  Title
Sensitivity of TLR4- and -7-induced NF kappa B1 p105-TPL2-ERK pathway to TNF-receptor-associated-factor-6 revealed by RNAi in mouse macrophages.
  Journal
Mol Immunol 44:3715-23 (2007)
DOI:10.1016/j.molimm.2007.04.002
Reference
  Authors
Arbibe L, Mira JP, Teusch N, Kline L, Guha M, Mackman N, Godowski PJ, Ulevitch RJ, Knaus UG.
  Title
Toll-like receptor 2-mediated NF-kappa B activation requires a Rac1-dependent pathway.
  Journal
Nat Immunol 1:533-40 (2000)
DOI:10.1038/82797
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and innate immunity.
  Journal
J Mol Med 84:712-25 (2006)
DOI:10.1007/s00109-006-0084-y
Related
pathway
aoce04010  MAPK signaling pathway
aoce04060  Cytokine-cytokine receptor interaction
aoce04120  Ubiquitin mediated proteolysis
aoce04210  Apoptosis
KO pathway
ko04620   

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