KEGG   PATHWAY: lruf05322
Entry
lruf05322                   Pathway                                
Name
Systemic lupus erythematosus - Lynx rufus (bobcat)
Description
Systemic lupus erythematosus (SLE) is a prototypic autoimmune disease characterised by the production of IgG autoantibodies that are specific for self-antigens, such as DNA, nuclear proteins and certain cytoplasmic components, in association with a diverse array of clinical manifestations. The primary pathological findings in patients with SLE are those of inflammation, vasculitis, immune complex deposition, and vasculopathy. Immune complexes comprising autoantibody and self-antigen is deposited particulary in the renal glomeruli and mediate a systemic inflammatory response by activating complement or via Fc{gamma}R-mediated neutrophil and macrophage activation. Activation of complement (C5) leads to injury both through formation of the membrane attack complex (C5b-9) or by generation of the anaphylatoxin and cell activator C5a. Neutrophils and macrophages cause tissue injury by the release of oxidants and proteases.
Class
Human Diseases; Immune disease
Pathway map
lruf05322  Systemic lupus erythematosus
lruf05322

Organism
Lynx rufus (bobcat) [GN:lruf]
Gene
124528942  complement C2 [KO:K01332] [EC:3.4.21.43]
124528092  complement C4-A-like [KO:K03989]
124505332  histone H2AX [KO:K11251]
124519941  histone H2A type 3 [KO:K11251]
124505905  core histone macro-H2A.2 [KO:K11251]
124527613  histone H2A-Bbd type 2/3-like [KO:K11251]
124527614  histone H2A-Bbd type 2/3-like [KO:K11251]
124527634  histone H2A-Bbd type 2/3-like [KO:K11251]
124520857  histone H2A.Z [KO:K11251]
124528469  histone H2A type 1-H-like [KO:K11251]
124528470  histone H2A type 1-E [KO:K11251]
124528471  histone H2A type 1-E [KO:K11251]
124528472  histone H2A type 1-E [KO:K11251]
124528473  histone H2A type 1-E [KO:K11251]
124528475  histone H2A type 1-E [KO:K11251]
124528476  histone H2A type 1-B [KO:K11251]
124528477  histone H2A type 1-H-like [KO:K11251]
124528478  histone H2A type 1-E [KO:K11251]
124528480  histone H2A type 1-B [KO:K11251]
124528481  histone H2A type 1-E-like [KO:K11251]
124528482  histone H2A type 1-E-like [KO:K11251]
124528560  histone H2A type 1-H-like [KO:K11251]
124514741  histone H2A type 2-B [KO:K11251]
124514742  histone H2A type 2-C [KO:K11251]
124515218  histone H2A type 2-A [KO:K11251]
124529233  histone H2A type 1-H-like [KO:K11251]
124515853  core histone macro-H2A.1 isoform X1 [KO:K11251]
124502417  histone H2A.J [KO:K11251]
124509442  histone H2A-Bbd type 1-like [KO:K11251]
124516373  histone H2A type 2-A [KO:K11251]
124509671  histone H2A-Bbd type 1-like [KO:K11251]
124509672  histone H2A-Bbd type 1-like [KO:K11251]
124509681  histone H2A-Bbd type 1-like [KO:K11251]
124523951  histone H2A.V isoform X1 [KO:K11251]
124510558  histone H2B subacrosomal variant-like [KO:K11252]
124519855  histone H2B type 3-B [KO:K11252]
124528453  histone H2B type 1-B-like [KO:K11252]
124528463  histone H2B type 1-K-like [KO:K11252]
124528483  histone H2B type 1-C/E/F/G/I [KO:K11252]
124528484  histone H2B type 1-M [KO:K11252]
124528485  histone H2B type 1-M [KO:K11252]
124528486  histone H2B type 1-C/E/F/G/I [KO:K11252]
124528487  histone H2B type 1-J [KO:K11252]
124528488  histone H2B type 1-K [KO:K11252]
124528489  histone H2B type 1-K [KO:K11252]
124528490  histone H2B type 1-C/E/F/G/I [KO:K11252]
124528492  histone H2B type 1-C/E/F/G/I [KO:K11252]
124528493  histone H2B type 1-C/E/F/G/I [KO:K11252]
124528494  histone H2B type 1-C/E/F/G/I [KO:K11252]
124528496  histone H2B type 1-C/E/F/G/I [KO:K11252]
124528497  histone H2B type 1-C/E/F/G/I [KO:K11252]
124528498  histone H2B type 1-C/E/F/G/I [KO:K11252]
124528499  histone H2B type 1-C/E/F/G/I [KO:K11252]
124514743  histone H2B type 2-E [KO:K11252]
124528683  histone H2B type 1-A [KO:K11252]
124515219  histone H2B type 2-E-like [KO:K11252]
124529019  histone H2B type 1-A-like [KO:K11252]
124516375  histone H2B type 2-F [KO:K11252]
124516376  histone H2B type 2-E-like [KO:K11252]
124523789  histone H2B type 2-K1 [KO:K11252]
124529236  uncharacterized protein LOC124529236 [KO:K11253]
124529238  uncharacterized protein LOC124529238 [KO:K11253]
124510297  histone H3.3A [KO:K11253]
124512311  histone H3.3A-like [KO:K11253]
124513410  histone H3.3A [KO:K11253]
124528462  histone H3.3-like [KO:K11253]
124528464  histone H3.1 [KO:K11253]
124528465  histone H3.1 [KO:K11253]
124528466  histone H3.1 [KO:K11253]
124528467  histone H3.1 [KO:K11253]
124528468  histone H3.1 [KO:K11253]
124528513  histone H3.1-like [KO:K11253]
124529235  histone H3.1-like [KO:K11253]
124503675  small nuclear ribonucleoprotein-associated proteins B and B' isoform X1 [KO:K11086]
124517630  small nuclear ribonucleoprotein Sm D1 [KO:K11087]
124525552  LOW QUALITY PROTEIN: small nuclear ribonucleoprotein Sm D1-like [KO:K11087]
124518242  small nuclear ribonucleoprotein Sm D3 [KO:K11088]
124520070  small nuclear ribonucleoprotein Sm D3-like [KO:K11088]
124517962  glutamate receptor ionotropic, NMDA 2A [KO:K05209]
124502547  glutamate receptor ionotropic, NMDA 2B [KO:K05210]
124505520  E3 ubiquitin-protein ligase TRIM21-like [KO:K10651] [EC:2.3.2.27]
124509952  RNA-binding protein RO60 isoform X1 [KO:K11089]
124515521  lupus La protein homolog [KO:K11090]
124511156  alpha-actinin-4 [KO:K05699]
124512082  alpha-actinin-1 isoform X1 [KO:K05699]
124527968  DLA class II histocompatibility antigen, DR-1 beta chain-like [KO:K06752]
124527969  HLA class II histocompatibility antigen, DR alpha chain [KO:K06752]
124527970  HLA class II histocompatibility antigen, DR alpha chain-like [KO:K06752]
124528564  DLA class II histocompatibility antigen, DR-1 beta chain [KO:K06752]
124528600  DLA class II histocompatibility antigen, DR-1 beta chain-like [KO:K06752]
124528621  HLA class II histocompatibility antigen, DM beta chain-like [KO:K06752]
124528730  HLA class II histocompatibility antigen, DO beta chain-like isoform X1 [KO:K06752]
124528769  HLA class II histocompatibility antigen, DO alpha chain-like [KO:K06752]
124528840  HLA class II histocompatibility antigen, DM alpha chain-like isoform X1 [KO:K06752]
124529193  HLA class II histocompatibility antigen, DP beta 1 chain-like [KO:K06752]
124529194  LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DP alpha 1 chain-like [KO:K06752]
124526384  T-lymphocyte activation antigen CD80-like [KO:K05412]
124526400  T-lymphocyte activation antigen CD86-like isoform X1 [KO:K05413]
124515009  T-cell-specific surface glycoprotein CD28 isoform X1 [KO:K06470]
124513966  CD40 ligand [KO:K03161]
124504027  tumor necrosis factor receptor superfamily member 5-like [KO:K03160]
124528979  tumor necrosis factor [KO:K03156]
124502020  interferon gamma [KO:K04687]
124510058  interleukin-10 [KO:K05443]
124502378  complement C1r subcomponent [KO:K01330] [EC:3.4.21.41]
124502523  complement C1s subcomponent-like [KO:K01331] [EC:3.4.21.42]
124522820  complement C3-like [KO:K03990]
124522854  complement C3-like [KO:K03990]
124522856  complement C3-like [KO:K03990]
124522857  complement C3-like isoform X1 [KO:K03990]
124522858  complement C3-like [KO:K03990]
124523587  complement C3-like [KO:K03990]
124523589  complement C3-like [KO:K03990]
124523590  complement C3-like [KO:K03990]
124524010  complement C3-like [KO:K03990]
124526637  complement C5-like [KO:K03994]
124507484  complement component C6-like [KO:K03995]
124510229  complement component C7 [KO:K03996]
124514432  complement component C8 alpha chain-like [KO:K03997]
124514133  complement component C8 beta chain [KO:K03998]
124522350  complement component C8 gamma chain-like [KO:K03999]
124507513  complement component C9-like [KO:K04000]
124508203  cathepsin G-like [KO:K01319] [EC:3.4.21.20]
124527663  neutrophil elastase-like isoform X1 [KO:K01327] [EC:3.4.21.37]
124515442  high affinity immunoglobulin gamma Fc receptor I-like isoform X1 [KO:K06498]
124509902  low affinity immunoglobulin gamma Fc region receptor III-A-like [KO:K06463]
Compound
C00027  Hydrogen peroxide
C00434  Double-stranded DNA
C02737  Phosphatidylserine
Reference
  Authors
Rahman A, Isenberg DA.
  Title
Systemic lupus erythematosus.
  Journal
N Engl J Med 358:929-39 (2008)
DOI:10.1056/NEJMra071297
Reference
  Authors
Mok CC, Lau CS.
  Title
Pathogenesis of systemic lupus erythematosus.
  Journal
J Clin Pathol 56:481-90 (2003)
DOI:10.1136/jcp.56.7.481
Reference
  Authors
Clatworthy MR, Smith KG.
  Title
B cells in glomerulonephritis: focus on lupus nephritis.
  Journal
Semin Immunopathol 29:337-53 (2007)
DOI:10.1007/s00281-007-0092-1
Reference
PMID:8048228
  Authors
Couser WG.
  Title
New insights into mechanisms of immune glomerular injury.
  Journal
West J Med 160:440-6 (1994)
Reference
  Authors
Cook HT, Botto M.
  Title
Mechanisms of Disease: the complement system and the pathogenesis of systemic lupus erythematosus.
  Journal
Nat Clin Pract Rheumatol 2:330-7 (2006)
DOI:10.1038/ncprheum0191
Reference
  Authors
Carroll MC.
  Title
A protective role for innate immunity in systemic lupus erythematosus.
  Journal
Nat Rev Immunol 4:825-31 (2004)
DOI:10.1038/nri1456
Reference
  Authors
Sturfelt G, Truedsson L.
  Title
Complement and its breakdown products in SLE.
  Journal
Rheumatology (Oxford) 44:1227-32 (2005)
DOI:10.1093/rheumatology/keh719
Reference
  Authors
Lu L, Kaliyaperumal A, Boumpas DT, Datta SK.
  Title
Major peptide autoepitopes for nucleosome-specific T cells of human lupus.
  Journal
J Clin Invest 104:345-55 (1999)
DOI:10.1172/JCI6801
Reference
  Authors
Zieve GW, Khusial PR.
  Title
The anti-Sm immune response in autoimmunity and cell biology.
  Journal
Autoimmun Rev 2:235-40 (2003)
DOI:10.1016/S1568-9972(03)00018-1
Reference
  Authors
Scofield RH, Farris AD, Horsfall AC, Harley JB.
  Title
Fine specificity of the autoimmune response to the Ro/SSA and La/SSB ribonucleoproteins.
  Journal
Arthritis Rheum 42:199-209 (1999)
DOI:10.1002/1529-0131(199902)42:2<199::AID-ANR1>3.0.CO;2-1
Reference
  Authors
Hoffman RW.
  Title
T cells in the pathogenesis of systemic lupus erythematosus.
  Journal
Clin Immunol 113:4-13 (2004)
DOI:10.1016/j.clim.2004.05.001
Related
pathway
lruf04060  Cytokine-cytokine receptor interaction
lruf04514  Cell adhesion molecules
lruf04610  Complement and coagulation cascades
lruf04612  Antigen processing and presentation
lruf04630  JAK-STAT signaling pathway
lruf04660  T cell receptor signaling pathway
lruf04662  B cell receptor signaling pathway
lruf04670  Leukocyte transendothelial migration
KO pathway
ko05322   
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