Entry
Name
Endocytosis - Microtus oregoni (creeping vole)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Microtus oregoni (creeping vole) [GN:
morg ]
Gene
121455766 Zfyve16; zinc finger FYVE domain-containing protein 16 [KO:K04679 ]
121448100 Zfyve9; zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
121438761 Smad2; mothers against decapentaplegic homolog 2 isoform X1 [KO:K04500 ]
121466030 Smad3; mothers against decapentaplegic homolog 3 isoform X1 [KO:K23605 ]
121441178 Sh3kbp1; SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
121453245 Bin1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
121462690 Eps15l1; epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
121448057 Eps15; epidermal growth factor receptor substrate 15 isoform X1 [KO:K12472 ]
121448097 Ldlrap1; low density lipoprotein receptor adapter protein 1 [KO:K12474 ]
121463173 Arpc5l; actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
121439766 Wipf3; WAS/WASL-interacting protein family member 3 isoform X1 [KO:K19475 ]
121448155 Dnajc6; putative tyrosine-protein phosphatase auxilin isoform X1 [KO:K09526 ]
121448466 Capzb; F-actin-capping protein subunit beta isoform X1 [KO:K10365 ]
121446007 Vps29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
121451782 Vps26b; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
121451000 Vps26a; vacuolar protein sorting-associated protein 26A [KO:K18466 ]
121447192 Vps35; vacuolar protein sorting-associated protein 35 [KO:K18468 ]
121444100 hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
121444608 hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
121432583 Stam; signal transducing adapter molecule 1 isoform X1 [KO:K04705 ]
121448160 Tsg101; tumor susceptibility gene 101 protein isoform X1 [KO:K12183 ]
121461303 Vps28; vacuolar protein sorting-associated protein 28 homolog [KO:K12184 ]
121454679 Vps37c; vacuolar protein sorting-associated protein 37C isoform X1 [KO:K12185 ]
121444567 Vps37d; vacuolar protein sorting-associated protein 37D isoform X1 [KO:K12185 ]
121446348 Vps37b; vacuolar protein sorting-associated protein 37B [KO:K12185 ]
121442817 Vps37a; vacuolar protein sorting-associated protein 37A isoform X1 [KO:K12185 ]
121462293 Vps36; vacuolar protein-sorting-associated protein 36 [KO:K12190 ]
121442446 Vps25; vacuolar protein-sorting-associated protein 25 [KO:K12189 ]
121434910 Chmp4a; LOW QUALITY PROTEIN: charged multivesicular body protein 4a [KO:K12194 ]
121446275 Vps4b; vacuolar protein sorting-associated protein 4B [KO:K12196 ]
121446872 Vps4a; vacuolar protein sorting-associated protein 4A [KO:K12196 ]
121466447 Vta1; vacuolar protein sorting-associated protein VTA1 homolog isoform X1 [KO:K12199 ]
121464215 programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
121466371 Igf2r; cation-independent mannose-6-phosphate receptor [KO:K06564 ]
121444965 cytokine receptor common subunit gamma-like isoform X1 [KO:K05070 ]
121435269 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1 [KO:K06751 ]
121435270 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1 [KO:K06751 ]
121435271 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1 [KO:K06751 ]
121435272 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1 [KO:K06751 ]
121435273 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1 [KO:K06751 ]
121435274 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1 [KO:K06751 ]
121435275 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1 [KO:K06751 ]
121435277 RT1 class I histocompatibility antigen, AA alpha chain-like isoform X1 [KO:K06751 ]
121435283 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1 [KO:K06751 ]
121435313 H-2 class I histocompatibility antigen, Q10 alpha chain-like [KO:K06751 ]
121435364 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like isoform X1 [KO:K06751 ]
121435376 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like isoform X1 [KO:K06751 ]
121435377 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1 [KO:K06751 ]
121435378 H-2 class I histocompatibility antigen, Q10 alpha chain-like [KO:K06751 ]
121435379 H-2 class I histocompatibility antigen, D-37 alpha chain-like [KO:K06751 ]
121435380 H-2 class I histocompatibility antigen, L-D alpha chain-like [KO:K06751 ]
121435381 H-2 class I histocompatibility antigen, L-D alpha chain-like isoform X1 [KO:K06751 ]
121435382 H-2 class I histocompatibility antigen, D-37 alpha chain-like isoform X1 [KO:K06751 ]
121435464 class I histocompatibility antigen, B alpha chain-like [KO:K06751 ]
121435500 patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751 ]
121435594 patr class I histocompatibility antigen, A-2 alpha chain-like [KO:K06751 ]
121435668 class I histocompatibility antigen, Gogo-B*0103 alpha chain-like [KO:K06751 ]
121435669 H-2 class I histocompatibility antigen, Q10 alpha chain-like [KO:K06751 ]
121435693 saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751 ]
121435695 putative HLA class I histocompatibility antigen, alpha chain H [KO:K06751 ]
121435698 patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751 ]
121456512 Rabep1; rab GTPase-binding effector protein 1 isoform X1 [KO:K12480 ]
121450810 Rufy2; RUN and FYVE domain-containing protein 2 isoform X1 [KO:K12482 ]
121454084 Rab11fip2; rab11 family-interacting protein 2 isoform X1 [KO:K12484 ]
121462250 Rab11fip1; rab11 family-interacting protein 1 isoform X1 [KO:K12484 ]
121435070 Rab11fip5; rab11 family-interacting protein 5 isoform X1 [KO:K12484 ]
121456288 Rab11fip4; rab11 family-interacting protein 4 isoform X1 [KO:K12485 ]
121463676 Rab11fip3; rab11 family-interacting protein 3 isoform X1 [KO:K12485 ]
121447227 Pard6a; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
121448012 Cdc42; cell division control protein 42 homolog isoform X1 [KO:K04393 ]
121450547 Smap1; stromal membrane-associated protein 1 isoform X1 [KO:K12486 ]
121461057 Asap1; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12488 ]
121438893 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
121432362 Asap2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
121448158 Asap3; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 [KO:K12488 ]
121461657 Acap2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12489 ]
121456845 Acap1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 [KO:K12489 ]
121443592 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 [KO:K12489 ]
121448048 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 [KO:K12489 ]
121463693 Arap1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
121460757 Arap2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K18440 ]
121453343 Arap3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
121439955 Agap3; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
121447185 Agap1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12491 ]
121463950 Agap2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
121440851 Arfgap1; ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [KO:K12492 ]
121461245 Arfgap3; ADP-ribosylation factor GTPase-activating protein 3 isoform X1 [KO:K12493 ]
121437595 Arfgap2; ADP-ribosylation factor GTPase-activating protein 2 isoform X1 [KO:K12493 ]
121462734 Psd3; PH and SEC7 domain-containing protein 3 isoform X1 [KO:K12494 ]
121462889 Psd4; PH and SEC7 domain-containing protein 4 isoform X1 [KO:K12494 ]
121453282 PH and SEC7 domain-containing protein 2-like isoform X1 [KO:K12494 ]
121445558 Iqsec2; IQ motif and SEC7 domain-containing protein 2 isoform X1 [KO:K12495 ]
121439627 Iqsec1; IQ motif and SEC7 domain-containing protein 1 isoform X1 [KO:K12495 ]
121433814 Iqsec3; IQ motif and SEC7 domain-containing protein 3 isoform X1 [KO:K12495 ]
121443079 LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein 2-like [KO:K12495 ]
121458286 Arfgef1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1 [KO:K18442 ]
121460079 Arfgef2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1 [KO:K18442 ]
121453903 Gbf1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [KO:K18443 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
morg04060 Cytokine-cytokine receptor interaction
morg04070 Phosphatidylinositol signaling system
morg04130 SNARE interactions in vesicular transport
KO pathway
LinkDB
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