Entry
Name
Endocytosis - Trichechus manatus latirostris (Florida manatee)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Trichechus manatus latirostris (Florida manatee) [GN:
tmu ]
Gene
101358561 zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
101352616 zinc finger FYVE domain-containing protein 16 isoform X1 [KO:K04679 ]
101361453 SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
101340430 epidermal growth factor receptor substrate 15 isoform X4 [KO:K12472 ]
101354182 actin-related protein 2/3 complex subunit 3 isoform X3 [KO:K05756 ]
101360925 actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
101356536 LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein-like [KO:K03283 ]
101347123 putative tyrosine-protein phosphatase auxilin isoform X1 [KO:K09526 ]
101353060 vacuolar protein sorting-associated protein 29 isoform X3 [KO:K18467 ]
101357890 vacuolar protein sorting-associated protein 26B isoform X1 [KO:K18466 ]
101359316 vacuolar protein sorting-associated protein 26A isoform X1 [KO:K18466 ]
101341062 hepatocyte growth factor-regulated tyrosine kinase substrate [KO:K12182 ]
101361046 vacuolar protein sorting-associated protein 28 homolog [KO:K12184 ]
101359907 vacuolar protein sorting-associated protein 37A isoform X1 [KO:K12185 ]
101358272 vacuolar protein-sorting-associated protein 36 isoform X1 [KO:K12190 ]
101346972 LOW QUALITY PROTEIN: charged multivesicular body protein 4a [KO:K12194 ]
101348888 vacuolar protein sorting-associated protein 4A isoform X3 [KO:K12196 ]
101347681 vacuolar protein sorting-associated protein 4B isoform X1 [KO:K12196 ]
101340770 vacuolar protein sorting-associated protein VTA1 homolog isoform X2 [KO:K12199 ]
101348599 programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
101359320 HLA class I histocompatibility antigen, A-80 alpha chain-like [KO:K06751 ]
101345748 H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X3 [KO:K06751 ]
101346884 HLA class I histocompatibility antigen, A-80 alpha chain-like [KO:K06751 ]
101347138 HLA class I histocompatibility antigen, B-40 alpha chain-like isoform X1 [KO:K06751 ]
101345854 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like isoform X1 [KO:K06751 ]
101350180 patr class I histocompatibility antigen, B-1 alpha chain-like isoform X1 [KO:K06751 ]
101346109 class I histocompatibility antigen, Gogo-B*0102 alpha chain-like isoform X1 [KO:K06751 ]
101346365 class I histocompatibility antigen, Gogo-B*0103 alpha chain-like [KO:K06751 ]
101340887 saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751 ]
101349740 HLA class I histocompatibility antigen, Cw-12 alpha chain-like [KO:K06751 ]
101355924 vacuolar protein sorting-associated protein 45 isoform X1 [KO:K12479 ]
101350066 LOW QUALITY PROTEIN: ARF GTPase-activating protein GIT2 [KO:K12487 ]
101351745 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 [KO:K12488 ]
101358054 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12488 ]
101350446 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12488 ]
101352613 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X2 [KO:K12489 ]
101357290 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X2 [KO:K12489 ]
101354607 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 [KO:K12489 ]
101351953 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
101347056 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K18440 ]
101357139 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 [KO:K12490 ]
101343131 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12491 ]
101347146 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 [KO:K12491 ]
101355788 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
101343151 ADP-ribosylation factor GTPase-activating protein 1 isoform X2 [KO:K12492 ]
101349326 ADP-ribosylation factor GTPase-activating protein 2 isoform X4 [KO:K12493 ]
101343350 ADP-ribosylation factor GTPase-activating protein 3 isoform X1 [KO:K12493 ]
101343040 IQ motif and SEC7 domain-containing protein 1 isoform X3 [KO:K12495 ]
101355792 IQ motif and SEC7 domain-containing protein 3 isoform X1 [KO:K12495 ]
101359073 IQ motif and SEC7 domain-containing protein 2 isoform X1 [KO:K12495 ]
101341130 brefeldin A-inhibited guanine nucleotide-exchange protein 2 [KO:K18442 ]
101342229 brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1 [KO:K18442 ]
101352424 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 [KO:K18443 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
tmu04060 Cytokine-cytokine receptor interaction
tmu04070 Phosphatidylinositol signaling system
tmu04130 SNARE interactions in vesicular transport
KO pathway
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