KEGG   PATHWAY: shr04640
Entry
shr04640                    Pathway                                
Name
Hematopoietic cell lineage - Sarcophilus harrisii (Tasmanian devil)
Description
Blood-cell development progresses from a hematopoietic stem cell (HSC), which can undergo either self-renewal or differentiation into a multilineage committed progenitor cell: a common lymphoid progenitor (CLP) or a common myeloid progenitor (CMP). A CLP gives rise to the lymphoid lineage of white blood cells or leukocytes-the natural killer (NK) cells and the T and B lymphocytes. A CMP gives rise to the myeloid lineage, which comprises the rest of the leukocytes, the erythrocytes (red blood cells), and the megakaryocytes that produce platelets important in blood clotting. Cells undergoing these differentiation process express a stage- and lineage-specific set of surface markers. Therefore cellular stages are identified by the specific expression patterns of these genes.
Class
Organismal Systems; Immune system
Pathway map
shr04640  Hematopoietic cell lineage
shr04640

Organism
Sarcophilus harrisii (Tasmanian devil) [GN:shr]
Gene
100913252  IL1R2; interleukin-1 receptor type 2 isoform X1 [KO:K04387]
100913507  FLT3LG; fms-related tyrosine kinase 3 ligand [KO:K05454]
100913514  [KO:K04386]
100914681  IL4; interleukin-4 [KO:K05430]
100914918  CR2; complement receptor type 2 [KO:K04012]
100915092  GP1BA; platelet glycoprotein Ib alpha chain [KO:K06261]
100915478  IL7R; interleukin-7 receptor subunit alpha isoform X1 [KO:K05072]
100916220  CD36; platelet glycoprotein 4 [KO:K06259]
100916427  CD8B; T-cell surface glycoprotein CD8 beta chain [KO:K06459]
100916690  CD8A; T-cell surface glycoprotein CD8 alpha chain [KO:K06458]
100916709  IL5RA; interleukin-5 receptor subunit alpha isoform X1 [KO:K05067]
100916950  CSF1R; macrophage colony-stimulating factor 1 receptor [KO:K05090] [EC:2.7.10.1]
100917948  IL3RA; interleukin-3 receptor subunit alpha isoform X1 [KO:K04737]
100918091  [KO:K06856]
100918485  [KO:K06752]
100918744  [KO:K06752]
100919058  CD3E; T-cell surface glycoprotein CD3 epsilon chain [KO:K06451]
100919268  CD9; CD9 antigen [KO:K06460]
100919485  CD19; B-lymphocyte antigen CD19 isoform X1 [KO:K06465]
100920293  MME; neprilysin [KO:K01389] [EC:3.4.24.11]
100920305  CD55; complement decay-accelerating factor isoform X4 [KO:K04006]
100920734  ITGB3; integrin beta-3 [KO:K06493]
100920900  [KO:K04006]
100921429  CD34; hematopoietic progenitor cell antigen CD34 isoform X1 [KO:K06474]
100921679  ITGAM; integrin alpha-M isoform X1 [KO:K06461]
100921841  GALT; galactose-1-phosphate uridylyltransferase isoform X1 [KO:K05056]
100921875  TNF; tumor necrosis factor [KO:K03156]
100922104  IL4R; interleukin-4 receptor subunit alpha isoform X1 [KO:K05071]
100922350  IL1B; interleukin-1 beta [KO:K04519]
100922441  EPOR; erythropoietin receptor isoform X1 [KO:K05079]
100922474  [KO:K06752]
100923003  [KO:K06752]
100923185  CD4; T-cell surface glycoprotein CD4 precursor [KO:K06454]
100923187  ITGA5; integrin alpha-5 [KO:K06484]
100923854  ITGA4; integrin alpha-4 isoform X1 [KO:K06483]
100924074  ANPEP; aminopeptidase N [KO:K11140] [EC:3.4.11.2]
100924490  EPO; erythropoietin [KO:K05437]
100924664  IL6R; interleukin-6 receptor subunit alpha [KO:K05055]
100924822  [KO:K06452]
100924825  CD22; B-cell receptor CD22 [KO:K06467]
100925080  [KO:K06450]
100925445  CSF3; LOW QUALITY PROTEIN: granulocyte colony-stimulating factor [KO:K05423]
100925503  [KO:K06856]
100925533  [KO:K06752]
100925801  [KO:K06752]
100927399  FCER2; low affinity immunoglobulin epsilon Fc receptor isoform X1 [KO:K06468]
100928203  [KO:K06448]
100928379  ITGA3; integrin alpha-3 isoform X1 [KO:K06482]
100928707  CSF3R; granulocyte colony-stimulating factor receptor [KO:K05061]
100929008  MS4A1; B-lymphocyte antigen CD20 [KO:K06466]
100929219  ITGA6; integrin alpha-6 isoform X1 [KO:K06485]
100929346  KIT; mast/stem cell growth factor receptor Kit isoform X2 [KO:K05091] [EC:2.7.10.1]
100929485  CD37; leukocyte antigen CD37 [KO:K06475]
100929488  [KO:K06473]
100929912  FLT3; receptor-type tyrosine-protein kinase FLT3 isoform X1 [KO:K05092] [EC:2.7.10.1]
100929969  ITGA1; integrin alpha-1 [KO:K06480]
100930068  GP9; platelet glycoprotein IX isoform X1 [KO:K06263]
100930278  CSF1; macrophage colony-stimulating factor 1 isoform X2 [KO:K05453]
100930980  [KO:K06752]
100932021  ITGA2B; integrin alpha-IIb [KO:K06476]
100932139  CD5; T-cell surface glycoprotein CD5 [KO:K06455]
100932375  CD2; T-cell surface antigen CD2 isoform X2 [KO:K06449]
100932555  DNTT; DNA nucleotidylexotransferase isoform X1 [KO:K00977] [EC:2.7.7.31]
100934043  IL5; interleukin-5 [KO:K05428]
100934452  KITLG; kit ligand isoform X1 [KO:K05461]
100934480  CD14; monocyte differentiation antigen CD14 [KO:K04391]
100935579  [KO:K06856]
105749132  IL1A; interleukin-1 alpha [KO:K04383]
105749532  [KO:K05073]
105749727  ITGA2; integrin alpha-2 [KO:K06481]
105749994  CSF2RA; granulocyte-macrophage colony-stimulating factor receptor subunit alpha [KO:K05066]
105749995  [KO:K04737]
105750562  THPO; thrombopoietin [KO:K06854]
105750698  IL2RA; interleukin-2 receptor subunit alpha isoform X1 [KO:K05068]
105750762  IL6; interleukin-6 [KO:K05405]
105750896  [KO:K06575]
105750944  CD59; CD59 glycoprotein [KO:K04008]
105750947  CD44; CD44 antigen isoform X1 [KO:K06256]
105751033  CD38; ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 [KO:K01242] [EC:3.2.2.6 2.4.99.20]
116420560  IL7; interleukin-7 [KO:K05431]
116420869  GP1BB; platelet glycoprotein Ib beta chain [KO:K06262]
Reference
  Authors
Janeway CA Jr, Travers P, Walport M, Shlomchik MJ
  Title
Immunobiology - International editon: The immune system in health and disease
  Journal
Harcourt Publishers Ltd, a subsidiary of Harcourt International Ltd (2001)
Reference
  Authors
Abe T
  Title
[Atlas of malignancies in hematopoietic organ - Morphology, immunology, chromosome and gene] (In Japanese)
  Journal
Nihonijishinhousya (2000)
Reference
  Authors
Rothenberg EV, Taghon T.
  Title
Molecular genetics of T cell development.
  Journal
Annu Rev Immunol 23:601-49 (2005)
DOI:10.1146/annurev.immunol.23.021704.115737
Reference
  Authors
Ceredig R, Rolink T.
  Title
A positive look at double-negative thymocytes.
  Journal
Nat Rev Immunol 2:888-97 (2002)
DOI:10.1038/nri937
Reference
  Authors
de Bruijn MF, Speck NA.
  Title
Core-binding factors in hematopoiesis and immune function.
  Journal
Oncogene 23:4238-48 (2004)
DOI:10.1038/sj.onc.1207763
Reference
  Authors
Radtke F, Wilson A, Mancini SJ, MacDonald HR.
  Title
Notch regulation of lymphocyte development and function.
  Journal
Nat Immunol 5:247-53 (2004)
DOI:10.1038/ni1045
Reference
  Authors
Spits H.
  Title
Development of alphabeta T cells in the human thymus.
  Journal
Nat Rev Immunol 2:760-72 (2002)
DOI:10.1038/nri913
Reference
PMID:9927518
  Authors
Di Santo JP, Aifantis I, Rosmaraki E, Garcia C, Feinberg J, Fehling HJ, Fischer A, von Boehmer H, Rocha B.
  Title
The common cytokine receptor gamma chain and the pre-T cell receptor provide independent but critically overlapping signals in early alpha/beta T cell development.
  Journal
J Exp Med 189:563-74 (1999)
DOI:10.1084/jem.189.3.563
Reference
  Authors
Mak TW, Penninger JM, Ohashi PS.
  Title
Knockout mice: a paradigm shift in modern immunology.
  Journal
Nat Rev Immunol 1:11-9 (2001)
DOI:10.1038/35095551
Reference
  Authors
Shapiro-Shelef M, Calame K.
  Title
Regulation of plasma-cell development.
  Journal
Nat Rev Immunol 5:230-42 (2005)
DOI:10.1038/nri1572
Reference
  Authors
Maillard I, Adler SH, Pear WS.
  Title
Notch and the immune system.
  Journal
Immunity 19:781-91 (2003)
DOI:10.1016/S1074-7613(03)00325-X
Reference
  Authors
Alpdogan O, van den Brink MR.
  Title
IL-7 and IL-15: therapeutic cytokines for immunodeficiency.
  Journal
Trends Immunol 26:56-64 (2005)
DOI:10.1016/j.it.2004.11.002
KO pathway
ko04640   

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