KEGG   PATHWAY: tng04110
Entry
tng04110                    Pathway                                
Name
Cell cycle - Tetraodon nigroviridis (spotted green pufferfish)
Description
Mitotic cell cycle progression is accomplished through a reproducible sequence of events, DNA replication (S phase) and mitosis (M phase) separated temporally by gaps known as G1 and G2 phases. Cyclin-dependent kinases (CDKs) are key regulatory enzymes, each consisting of a catalytic CDK subunit and an activating cyclin subunit. CDKs regulate the cell's progression through the phases of the cell cycle by modulating the activity of key substrates. Downstream targets of CDKs include transcription factor E2F and its regulator Rb. Precise activation and inactivation of CDKs at specific points in the cell cycle are required for orderly cell division. Cyclin-CDK inhibitors (CKIs), such as p16Ink4a, p15Ink4b, p27Kip1, and p21Cip1, are involved in the negative regulation of CDK activities, thus providing a pathway through which the cell cycle is negatively regulated.
 Eukaryotic cells respond to DNA damage by activating signaling pathways that promote cell cycle arrest and DNA repair. In response to DNA damage, the checkpoint kinase ATM phosphorylates and activates Chk2, which in turn directly phosphorylates and activates p53 tumor suppressor protein. p53 and its transcriptional targets play an important role in both G1 and G2 checkpoints. ATR-Chk1-mediated protein degradation of Cdc25A protein phosphatase is also a mechanism conferring intra-S-phase checkpoint activation.
Class
Cellular Processes; Cell growth and death
Pathway map
tng04110  Cell cycle
tng04110

Other DBs
GO: 0000278
Organism
Tetraodon nigroviridis (spotted green pufferfish) [GN:tng]
Gene
GSTEN00026524G001  unnamed protein product [KO:K04503]
GSTEN00021540G001  unnamed protein product [KO:K10151]
GSTEN00016773G001  unnamed protein product [KO:K10151]
GSTEN00027337G001  unnamed protein product [KO:K10151]
GSTEN00033818G001  unnamed protein product [KO:K02089] [EC:2.7.11.22]
GSTEN00032981G001  unnamed protein product [KO:K02091] [EC:2.7.11.22]
GSTEN00027855G001  unnamed protein product [KO:K02091] [EC:2.7.11.22]
GSTEN00022163G001  unnamed protein product [KO:K06618]
GSTEN00012861G001  unnamed protein product [KO:K04681]
GSTEN00017201G001  unnamed protein product [KO:K06619] [EC:2.7.10.2]
GSTEN00031367G001  unnamed protein product [KO:K06067] [EC:3.5.1.98]
GSTEN00009146G001  unnamed protein product [KO:K06067] [EC:3.5.1.98]
GSTEN00017616G001  unnamed protein product [KO:K06067] [EC:3.5.1.98]
GSTEN00008908G001  unnamed protein product [KO:K17454]
GSTEN00032084G001  unnamed protein product [KO:K09389]
GSTEN00001070G001  unnamed protein product [KO:K06620]
GSTEN00018275G001  unnamed protein product [KO:K06620]
GSTEN00017605G001  unnamed protein product [KO:K06620]
GSTEN00001840G001  unnamed protein product [KO:K04682]
GSTEN00016778G001  unnamed protein product [KO:K04682]
GSTEN00009166G001  unnamed protein product [KO:K04682]
GSTEN00025964G001  unnamed protein product [KO:K04683]
GSTEN00035186G001  unnamed protein product [KO:K13375]
GSTEN00011872G001  unnamed protein product [KO:K13376]
GSTEN00031190G001  unnamed protein product [KO:K13376]
GSTEN00032323G001  unnamed protein product [KO:K13377]
GSTEN00030322G001  unnamed protein product [KO:K13377]
GSTEN00021584G001  unnamed protein product [KO:K04500]
GSTEN00017220G001  unnamed protein product [KO:K04501]
GSTEN00004746G001  unnamed protein product [KO:K04501]
GSTEN00008799G001  unnamed protein product [KO:K04501]
GSTEN00031807G001  unnamed protein product [KO:K04377]
GSTEN00020605G001  unnamed protein product [KO:K10500]
GSTEN00033477G001  unnamed protein product [KO:K04685]
GSTEN00028829G001  unnamed protein product [KO:K06622]
GSTEN00007888G001  unnamed protein product [KO:K06623]
GSTEN00016108G001  unnamed protein product [KO:K09993]
GSTEN00027332G001  unnamed protein product [KO:K06625]
GSTEN00024300G001  unnamed protein product [KO:K06626]
GSTEN00011727G001  unnamed protein product [KO:K06626]
GSTEN00033829G001  unnamed protein product [KO:K02206] [EC:2.7.11.22]
GSTEN00004655G001  unnamed protein product [KO:K03094]
GSTEN00029891G001  unnamed protein product [KO:K03094]
GSTEN00008999G001  unnamed protein product [KO:K03868] [EC:2.3.2.32]
GSTEN00018864G001  unnamed protein product [KO:K06627]
GSTEN00024450G001  unnamed protein product [KO:K06627]
GSTEN00011951G001  unnamed protein product [KO:K02213]
GSTEN00006375G001  unnamed protein product [KO:K10727]
GSTEN00010045G001  unnamed protein product [KO:K02603]
GSTEN00015101G001  unnamed protein product [KO:K02604]
GSTEN00001229G001  unnamed protein product [KO:K02605]
GSTEN00032136G001  unnamed protein product [KO:K02605]
GSTEN00005266G001  unnamed protein product [KO:K02606]
GSTEN00004097G001  unnamed protein product [KO:K02607]
GSTEN00032473G001  unnamed protein product [KO:K02540] [EC:5.6.2.3]
GSTEN00035496G001  unnamed protein product [KO:K02541] [EC:5.6.2.3]
GSTEN00016183G001  unnamed protein product [KO:K02212] [EC:5.6.2.3]
GSTEN00015093G001  unnamed protein product [KO:K02542] [EC:5.6.2.3]
GSTEN00029242G001  unnamed protein product [KO:K02210] [EC:5.6.2.3]
GSTEN00029587G001  unnamed protein product [KO:K06628]
GSTEN00019675G001  unnamed protein product [KO:K26117]
GSTEN00018295G001  unnamed protein product [KO:K26116]
GSTEN00013380G001  unnamed protein product [KO:K02214] [EC:2.7.11.1]
GSTEN00004705G001  unnamed protein product [KO:K02087] [EC:2.7.11.22 2.7.11.23]
GSTEN00009252G001  unnamed protein product [KO:K05868]
GSTEN00008349G001  unnamed protein product [KO:K21770]
GSTEN00034481G001  unnamed protein product [KO:K21771]
GSTEN00024898G001  unnamed protein product [KO:K16197]
GSTEN00006809G001  unnamed protein product [KO:K16197]
GSTEN00006810G001  unnamed protein product [KO:K16197]
GSTEN00017376G001  unnamed protein product [KO:K16197]
GSTEN00033230G001  unnamed protein product [KO:K16197]
GSTEN00002678G001  unnamed protein product [KO:K06630]
GSTEN00026699G001  unnamed protein product [KO:K06630]
GSTEN00030124G001  unnamed protein product [KO:K16198]
GSTEN00015731G001  unnamed protein product [KO:K06631] [EC:2.7.11.21]
GSTEN00016733G001  unnamed protein product [KO:K06632] [EC:2.7.11.1]
GSTEN00025682G001  unnamed protein product [KO:K06632] [EC:2.7.11.1]
GSTEN00035045G001  unnamed protein product [KO:K06633] [EC:2.7.11.1]
GSTEN00028721G001  unnamed protein product [KO:K06634]
GSTEN00028662G001  unnamed protein product [KO:K02202] [EC:2.7.11.22 2.7.11.23]
GSTEN00014297G001  unnamed protein product [KO:K03348]
GSTEN00021292G001  unnamed protein product [KO:K03349]
GSTEN00005521G001  unnamed protein product [KO:K03350]
GSTEN00032787G001  unnamed protein product [KO:K03351]
GSTEN00021646G001  unnamed protein product [KO:K03352]
GSTEN00027898G001  unnamed protein product [KO:K03353]
GSTEN00021598G001  unnamed protein product [KO:K03354]
GSTEN00019048G001  unnamed protein product [KO:K03355]
GSTEN00008031G001  unnamed protein product [KO:K03357]
GSTEN00026387G001  unnamed protein product [KO:K03358]
GSTEN00024792G001  unnamed protein product [KO:K03359]
GSTEN00016792G001  unnamed protein product [KO:K12456]
GSTEN00005116G001  unnamed protein product [KO:K25228]
GSTEN00035891G001  unnamed protein product [KO:K25229]
GSTEN00028405G001  unnamed protein product [KO:K03363]
GSTEN00029311G001  unnamed protein product [KO:K06635]
GSTEN00027237G001  unnamed protein product [KO:K02365] [EC:3.4.22.49]
GSTEN00028108G001  unnamed protein product [KO:K06636]
GSTEN00025674G001  unnamed protein product [KO:K06636]
GSTEN00020020G001  unnamed protein product [KO:K06669]
GSTEN00035382G001  unnamed protein product [KO:K06670]
GSTEN00023505G001  unnamed protein product [KO:K06670]
GSTEN00029356G001  unnamed protein product [KO:K06671]
GSTEN00022179G001  unnamed protein product [KO:K06671]
GSTEN00012730G001  unnamed protein product [KO:K06671]
GSTEN00029241G001  unnamed protein product [KO:K06671]
GSTEN00017033G001  unnamed protein product [KO:K10779]
GSTEN00022205G001  unnamed protein product [KO:K10779]
GSTEN00035575G001  unnamed protein product [KO:K11273] [EC:5.6.2.7]
GSTEN00017213G001  unnamed protein product [KO:K06672]
GSTEN00024719G001  unnamed protein product [KO:K11266]
GSTEN00010584G001  unnamed protein product [KO:K11405] [EC:3.5.1.98]
GSTEN00031795G001  unnamed protein product [KO:K11268] [EC:2.3.1.-]
GSTEN00035481G001  unnamed protein product [KO:K11268] [EC:2.3.1.-]
GSTEN00018856G001  unnamed protein product [KO:K11267]
GSTEN00009170G001  unnamed protein product [KO:K11267]
GSTEN00031558G001  unnamed protein product [KO:K25163]
GSTEN00004110G001  unnamed protein product [KO:K25163]
GSTEN00029246G001  unnamed protein product [KO:K11479] [EC:2.7.11.1]
GSTEN00017462G001  unnamed protein product [KO:K11580]
GSTEN00034910G001  unnamed protein product [KO:K04382] [EC:3.1.3.16]
GSTEN00004657G001  unnamed protein product [KO:K04382] [EC:3.1.3.16]
GSTEN00029892G001  unnamed protein product [KO:K04382] [EC:3.1.3.16]
GSTEN00005281G001  unnamed protein product [KO:K03456]
GSTEN00025867G001  unnamed protein product [KO:K11584]
GSTEN00020321G001  unnamed protein product [KO:K11584]
GSTEN00032114G001  unnamed protein product [KO:K11584]
GSTEN00025024G001  unnamed protein product [KO:K11584]
GSTEN00020721G001  unnamed protein product [KO:K11584]
GSTEN00023286G001  unnamed protein product [KO:K11584]
GSTEN00029380G001  unnamed protein product [KO:K11547]
GSTEN00013229G001  unnamed protein product [KO:K08866] [EC:2.7.12.1]
GSTEN00015724G001  unnamed protein product [KO:K06679]
GSTEN00011986G001  unnamed protein product [KO:K02537]
GSTEN00020616G001  unnamed protein product [KO:K13728]
GSTEN00035913G001  unnamed protein product [KO:K02180]
GSTEN00003975G001  unnamed protein product [KO:K02178] [EC:2.7.11.1]
GSTEN00034091G001  unnamed protein product [KO:K22399]
GSTEN00015020G001  unnamed protein product [KO:K03364]
GSTEN00028509G001  unnamed protein product [KO:K03364]
GSTEN00014301G001  unnamed protein product [KO:K10292]
GSTEN00030915G001  unnamed protein product [KO:K06639] [EC:3.1.3.16 3.1.3.48]
GSTEN00008276G001  unnamed protein product [KO:K06639] [EC:3.1.3.16 3.1.3.48]
GSTEN00024248G001  unnamed protein product [KO:K04498] [EC:2.3.1.48]
GSTEN00013510G001  unnamed protein product [KO:K04498] [EC:2.3.1.48]
GSTEN00026318G001  unnamed protein product [KO:K04498] [EC:2.3.1.48]
GSTEN00011900G001  unnamed protein product [KO:K04498] [EC:2.3.1.48]
GSTEN00013955G001  unnamed protein product [KO:K06642] [EC:2.7.11.1]
GSTEN00035967G001  unnamed protein product [KO:K06640] [EC:2.7.11.1]
GSTEN00005388G001  unnamed protein product [KO:K04728] [EC:2.7.11.1]
GSTEN00035854G001  unnamed protein product [KO:K06643] [EC:2.3.2.27]
GSTEN00019217G001  unnamed protein product [KO:K04451]
GSTEN00013393G001  unnamed protein product [KO:K04402]
GSTEN00030892G001  unnamed protein product [KO:K04402]
GSTEN00004743G001  unnamed protein product [KO:K04402]
GSTEN00004790G001  unnamed protein product [KO:K04402]
GSTEN00031910G001  unnamed protein product [KO:K04402]
GSTEN00028590G001  unnamed protein product [KO:K04802]
GSTEN00018969G001  unnamed protein product [KO:K02216] [EC:2.7.11.1]
GSTEN00007555G001  unnamed protein product [KO:K06641] [EC:2.7.11.1]
Reference
PMID:7908906
  Authors
Matsuoka S, Yamaguchi M, Matsukage A
  Title
D-type cyclin-binding regions of proliferating cell nuclear antigen.
  Journal
J Biol Chem 269:11030-6 (1994)
Reference
PMID:8242749
  Authors
Welch PJ, Wang JY
  Title
A C-terminal protein-binding domain in the retinoblastoma protein regulates nuclear c-Abl tyrosine kinase in the cell cycle.
  Journal
Cell 75:779-90 (1993)
DOI:10.1016/0092-8674(93)90497-E
Reference
  Authors
Macaluso M, Montanari M, Giordano A
  Title
Rb family proteins as modulators of gene expression and new aspects regarding the interaction with chromatin remodeling enzymes.
  Journal
Oncogene 25:5263-7 (2006)
DOI:10.1038/sj.onc.1209680
Reference
  Authors
Cobrinik D
  Title
Pocket proteins and cell cycle control.
  Journal
Oncogene 24:2796-809 (2005)
DOI:10.1038/sj.onc.1208619
Reference
  Authors
Boutros R, Lobjois V, Ducommun B
  Title
CDC25 phosphatases in cancer cells: key players? Good targets?
  Journal
Nat Rev Cancer 7:495-507 (2007)
DOI:10.1038/nrc2169
Reference
PMID:9832503
  Authors
Diehl JA, Cheng M, Roussel MF, Sherr CJ
  Title
Glycogen synthase kinase-3beta regulates cyclin D1 proteolysis and subcellular localization.
  Journal
Genes Dev 12:3499-511 (1998)
DOI:10.1101/gad.12.22.3499
Reference
  Authors
Klein EA, Assoian RK
  Title
Transcriptional regulation of the cyclin D1 gene at a glance.
  Journal
J Cell Sci 121:3853-7 (2008)
DOI:10.1242/jcs.039131
Reference
  Authors
Sherr CJ, Roberts JM
  Title
CDK inhibitors: positive and negative regulators of G1-phase progression.
  Journal
Genes Dev 13:1501-12 (1999)
DOI:10.1101/gad.13.12.1501
Reference
  Authors
Shi Y, Massague J.
  Title
Mechanisms of TGF-beta signaling from cell membrane to the nucleus.
  Journal
Cell 113:685-700 (2003)
DOI:10.1016/S0092-8674(03)00432-X
Reference
  Authors
Kamura T, Hara T, Kotoshiba S, Yada M, Ishida N, Imaki H, Hatakeyama S, Nakayama K, Nakayama KI
  Title
Degradation of p57Kip2 mediated by SCFSkp2-dependent ubiquitylation.
  Journal
Proc Natl Acad Sci U S A 100:10231-6 (2003)
DOI:10.1073/pnas.1831009100
Reference
  Authors
Bond M, Sala-Newby GB, Wu YJ, Newby AC
  Title
Biphasic effect of p21Cip1 on smooth muscle cell proliferation: role of PI 3-kinase and Skp2-mediated degradation.
  Journal
Cardiovasc Res 69:198-206 (2006)
DOI:10.1016/j.cardiores.2005.08.020
Reference
  Authors
Harris SL, Levine AJ.
  Title
The p53 pathway: positive and negative feedback loops.
  Journal
Oncogene 24:2899-908 (2005)
DOI:10.1038/sj.onc.1208615
Reference
  Authors
Vogelstein B, Lane D, Levine AJ
  Title
Surfing the p53 network.
  Journal
Nature 408:307-10 (2000)
DOI:10.1038/35042675
Reference
PMID:7973727
  Authors
Smith ML, Chen IT, Zhan Q, Bae I, Chen CY, Gilmer TM, Kastan MB, O'Connor PM, Fornace AJ Jr
  Title
Interaction of the p53-regulated protein Gadd45 with proliferating cell nuclear antigen.
  Journal
Science 266:1376-80 (1994)
DOI:10.1126/science.7973727
Reference
PMID:9889196
  Authors
Petersen BO, Lukas J, Sorensen CS, Bartek J, Helin K
  Title
Phosphorylation of mammalian CDC6 by cyclin A/CDK2 regulates its subcellular localization.
  Journal
EMBO J 18:396-410 (1999)
DOI:10.1093/emboj/18.2.396
Reference
  Authors
Sheu YJ, Stillman B
  Title
Cdc7-Dbf4 phosphorylates MCM proteins via a docking site-mediated mechanism to promote S phase progression.
  Journal
Mol Cell 24:101-13 (2006)
DOI:10.1016/j.molcel.2006.07.033
Reference
PMID:9029154
  Authors
Martinez AM, Afshar M, Martin F, Cavadore JC, Labbe JC, Doree M
  Title
Dual phosphorylation of the T-loop in cdk7: its role in controlling cyclin H binding and CAK activity.
  Journal
EMBO J 16:343-54 (1997)
DOI:10.1093/emboj/16.2.343
Reference
  Authors
Lolli G, Johnson LN
  Title
CAK-Cyclin-dependent Activating Kinase: a key kinase in cell cycle control and a target for drugs?
  Journal
Cell Cycle 4:572-7 (2005)
DOI:10.4161/cc.4.4.1607
Reference
  Authors
Musacchio A, Salmon ED
  Title
The spindle-assembly checkpoint in space and time.
  Journal
Nat Rev Mol Cell Biol 8:379-93 (2007)
DOI:10.1038/nrm2163
Reference
  Authors
Uhlmann F
  Title
Chromosome cohesion and separation: from men and molecules.
  Journal
Curr Biol 13:R104-14 (2003)
DOI:10.1016/S0960-9822(03)00039-3
Reference
  Authors
Stegmeier F, Amon A
  Title
Closing mitosis: the functions of the Cdc14 phosphatase and its regulation.
  Journal
Annu Rev Genet 38:203-32 (2004)
DOI:10.1146/annurev.genet.38.072902.093051
Reference
PMID:9618481
  Authors
Moustakas A, Kardassis D
  Title
Regulation of the human p21/WAF1/Cip1 promoter in hepatic cells by functional interactions between Sp1 and Smad family members.
  Journal
Proc Natl Acad Sci U S A 95:6733-8 (1998)
DOI:10.1073/pnas.95.12.6733
Reference
  Authors
de Boer HR, Guerrero Llobet S, van Vugt MA
  Title
Controlling the response to DNA damage by the APC/C-Cdh1.
  Journal
Cell Mol Life Sci 73:949-60 (2016)
DOI:10.1007/s00018-015-2096-7
Reference
  Authors
Qiao X, Zhang L, Gamper AM, Fujita T, Wan Y
  Title
APC/C-Cdh1: from cell cycle to cellular differentiation and genomic integrity.
  Journal
Cell Cycle 9:3904-12 (2010)
DOI:10.4161/cc.9.19.13585
Related
pathway
tng03030  DNA replication
tng04010  MAPK signaling pathway
tng04120  Ubiquitin mediated proteolysis
tng04210  Apoptosis
KO pathway
ko04110   
LinkDB

DBGET integrated database retrieval system