KEGG   PATHWAY: xco04115
Entry
xco04115                    Pathway                                
Name
p53 signaling pathway - Xiphophorus couchianus (Monterrey platyfish)
Description
p53 activation is induced by a number of stress signals, including DNA damage, oxidative stress and activated oncogenes. The p53 protein is employed as a transcriptional activator of p53-regulated genes. This results in three major outputs; cell cycle arrest, cellular senescence or apoptosis. Other p53-regulated gene functions communicate with adjacent cells, repair the damaged DNA or set up positive and negative feedback loops that enhance or attenuate the functions of the p53 protein and integrate these stress responses with other signal transduction pathways.
Class
Cellular Processes; Cell growth and death
Pathway map
xco04115  p53 signaling pathway
xco04115

Organism
Xiphophorus couchianus (Monterrey platyfish) [GN:xco]
Gene
114133326  ppm1d; protein phosphatase 1D isoform X1 [KO:K10147] [EC:3.1.3.16]
114133890  atr; serine/threonine-protein kinase ATR [KO:K06640] [EC:2.7.11.1]
114134066  [KO:K04402]
114134229  [KO:K16857]
114134296  ddb2; DNA damage-binding protein 2 isoform X1 [KO:K10140]
114134743  siva1; apoptosis regulatory protein Siva [KO:K22744]
114134751  tp53i3; LOW QUALITY PROTEIN: quinone oxidoreductase PIG3 [KO:K10133] [EC:1.-.-.-]
114134817  tp73; tumor protein p73 [KO:K10148]
114135121  [KO:K26543]
114135338  [KO:K04570]
114135348  mdm4; protein Mdm4 isoform X1 [KO:K10127]
114135401  [KO:K10135]
114135419  cdk4; cyclin-dependent kinase 4 [KO:K02089] [EC:2.7.11.22]
114135983  cdk2; cyclin-dependent kinase 2 [KO:K02206] [EC:2.7.11.22]
114136140  [KO:K10152]
114136223  [KO:K06625]
114136332  pidd1; p53-induced death domain-containing protein 1 [KO:K10130]
114137768  perp; p53 apoptosis effector related to PMP-22 [KO:K10136]
114137823  [KO:K04390]
114138052  aifm2; apoptosis-inducing factor 2 [KO:K22745]
114138179  [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]
114138409  [KO:K08738]
114138532  cdk1; cyclin-dependent kinase 1 [KO:K02087] [EC:2.7.11.22 2.7.11.23]
114139015  ccne2; G1/S-specific cyclin-E2 [KO:K06626]
114139290  [KO:K10141]
114139499  [KO:K02187] [EC:3.4.22.56]
114139590  ccng1; cyclin-G1 [KO:K10145]
114140963  steap3; metalloreductase STEAP3 [KO:K10142] [EC:1.16.1.-]
114141410  gorab; RAB6-interacting golgin [KO:K19748]
114141578  bcl2l1; bcl-2-like protein 1 [KO:K04570]
114141595  [KO:K06509]
114142519  [KO:K05459]
114142529  ccne1; G1/S-specific cyclin-E1 isoform X1 [KO:K06626]
114143104  gtse1; G2 and S phase-expressed protein 1 isoform X1 [KO:K10129]
114143123  ccnd1; G1/S-specific cyclin-D1 [KO:K04503]
114143133  [KO:K02159]
114143200  [KO:K21770]
114143682  [KO:K06509]
114143929  [KO:K26543]
114144137  adgrb1; adhesion G protein-coupled receptor B1 isoform X1 [KO:K04596]
114144355  casp3; caspase-3 [KO:K02187] [EC:3.4.22.56]
114144594  tsc2; tuberin isoform X1 [KO:K07207]
114146495  bcl2; apoptosis regulator Bcl-2 [KO:K02161]
114147064  cop1; E3 ubiquitin-protein ligase COP1 [KO:K10143] [EC:2.3.2.27]
114147136  [KO:K04398] [EC:3.4.22.61]
114147142  [KO:K04398] [EC:3.4.22.61]
114147177  gadd45a; growth arrest and DNA damage-inducible protein GADD45 alpha isoform X1 [KO:K04402]
114147198  [KO:K10138]
114147652  rprm; protein reprimo [KO:K10128]
114147894  [KO:K04398] [EC:3.4.22.61]
114148510  casp9; caspase-9 [KO:K04399] [EC:3.4.22.62]
114148921  [KO:K08738]
114149417  [KO:K04722]
114149655  [KO:K10146]
114149794  ccnb1; G2/mitotic-specific cyclin-B1 [KO:K05868]
114149816  [KO:K04402]
114150555  zmat3; zinc finger matrin-type protein 3 [KO:K10137]
114150599  [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]
114151072  [KO:K10138]
114151556  gadd45b; growth arrest and DNA damage-inducible protein GADD45 beta [KO:K04402]
114151637  [KO:K04398] [EC:3.4.22.61]
114152343  [KO:K10151]
114152470  chek1; serine/threonine-protein kinase Chk1 isoform X1 [KO:K02216] [EC:2.7.11.1]
114153003  [KO:K10147] [EC:3.1.3.16]
114153214  ei24; etoposide-induced protein 2.4 homolog [KO:K10134]
114154003  [KO:K10146]
114154314  [KO:K04722]
114154787  [KO:K06641] [EC:2.7.11.1]
114155033  rchy1; RING finger and CHY zinc finger domain-containing protein 1 [KO:K10144] [EC:2.3.2.27]
114155224  gadd45g; growth arrest and DNA damage-inducible protein GADD45 gamma [KO:K04402]
114155511  [KO:K04726]
114155613  rrm2b; ribonucleoside-diphosphate reductase subunit M2 B isoform X1 [KO:K10808] [EC:1.17.4.1]
114156288  cdk6; cyclin-dependent kinase 6 [KO:K02091] [EC:2.7.11.22]
114156389  [KO:K20394]
114157824  tp53; cellular tumor antigen p53 [KO:K04451]
114158035  serpine1; plasminogen activator inhibitor 1 [KO:K03982]
114158321  sesn1; sestrin-1 isoform X1 [KO:K10141]
114158629  [KO:K16857]
114159077  rrm2; ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
114159390  [KO:K10128]
114159833  [KO:K02091] [EC:2.7.11.22]
114160279  [KO:K02159]
114160286  [KO:K02159]
114160373  [KO:K10151]
114160673  [KO:K06625]
114160881  [KO:K10151]
114160921  apaf1; apoptotic protease-activating factor 1 isoform X1 [KO:K02084]
114160947  mdm2; E3 ubiquitin-protein ligase Mdm2 isoform X1 [KO:K06643] [EC:2.3.2.27]
114160998  igf1; insulin-like growth factor I isoform X1 [KO:K05459]
114161172  cd82; CD82 antigen [KO:K06509]
114161206  siah1; E3 ubiquitin-protein ligase SIAH1 isoform X1 [KO:K04506] [EC:2.3.2.27]
114161604  [KO:K21770]
114161857  ppp1r13l; relA-associated inhibitor [KO:K27356]
114161922  atm; serine-protein kinase ATM [KO:K04728] [EC:2.7.11.1]
Reference
  Authors
Levine AJ, Hu W, Feng Z.
  Title
The P53 pathway: what questions remain to be explored?
  Journal
Cell Death Differ 13:1027-36 (2006)
DOI:10.1038/sj.cdd.4401910
Reference
  Authors
Harris SL, Levine AJ.
  Title
The p53 pathway: positive and negative feedback loops.
  Journal
Oncogene 24:2899-908 (2005)
DOI:10.1038/sj.onc.1208615
Reference
  Authors
Balint E E, Vousden KH.
  Title
Activation and activities of the p53 tumour suppressor protein.
  Journal
Br J Cancer 85:1813-23 (2001)
DOI:10.1054/bjoc.2001.2128
Reference
  Authors
Taylor WR, Stark GR.
  Title
Regulation of the G2/M transition by p53.
  Journal
Oncogene 20:1803-15 (2001)
DOI:10.1038/sj.onc.1204252
Reference
  Authors
Hofseth LJ, Hussain SP, Harris CC.
  Title
p53: 25 years after its discovery.
  Journal
Trends Pharmacol Sci 25:177-81 (2004)
DOI:10.1016/j.tips.2004.02.009
Reference
  Authors
Pietenpol JA, Stewart ZA.
  Title
Cell cycle checkpoint signaling: cell cycle arrest versus apoptosis.
  Journal
Toxicology 181-182:475-81 (2002)
DOI:10.1016/S0300-483X(02)00460-2
Reference
  Authors
Tokino T, Nakamura Y.
  Title
The role of p53-target genes in human cancer.
  Journal
Crit Rev Oncol Hematol 33:1-6 (2000)
DOI:10.1016/S1040-8428(99)00051-7
Reference
  Authors
Hermeking H, Benzinger A.
  Title
14-3-3 proteins in cell cycle regulation.
  Journal
Semin Cancer Biol 16:183-92 (2006)
DOI:10.1016/j.semcancer.2006.03.002
Reference
  Authors
Sherr CJ.
  Title
Divorcing ARF and p53: an unsettled case.
  Journal
Nat Rev Cancer 6:663-73 (2006)
DOI:10.1038/nrc1954
Reference
  Authors
Feng Z, Hu W, de Stanchina E, Teresky AK, Jin S, Lowe S, Levine AJ.
  Title
The regulation of AMPK beta1, TSC2, and PTEN expression by p53: stress, cell and tissue specificity, and the role of these gene products in modulating the IGF-1-AKT-mTOR pathways.
  Journal
Cancer Res 67:3043-53 (2007)
DOI:10.1158/0008-5472.CAN-06-4149
Reference
  Authors
Resnick-Silverman L, Manfredi JJ
  Title
Two Faces of SIVA.
  Journal
Cancer Discov 5:581-3 (2015)
DOI:10.1158/2159-8290.CD-15-0484
Reference
  Authors
Resch U, Schichl YM, Winsauer G, Gudi R, Prasad K, de Martin R
  Title
Siva1 is a XIAP-interacting protein that balances NFkappaB and JNK signalling to promote apoptosis.
  Journal
J Cell Sci 122:2651-61 (2009)
DOI:10.1242/jcs.049940
Reference
  Authors
Barkinge JL, Gudi R, Sarah H, Chu F, Borthakur A, Prabhakar BS, Prasad KV
  Title
The p53-induced Siva-1 plays a significant role in cisplatin-mediated apoptosis.
  Journal
J Carcinog 8:2 (2009)
DOI:10.4103/1477-3163.45389
Reference
  Authors
Ohiro Y, Garkavtsev I, Kobayashi S, Sreekumar KR, Nantz R, Higashikubo BT, Duffy SL, Higashikubo R, Usheva A, Gius D, Kley N, Horikoshi N
  Title
A novel p53-inducible apoptogenic gene, PRG3, encodes a homologue of the apoptosis-inducing factor (AIF).
  Journal
FEBS Lett 524:163-71 (2002)
DOI:10.1016/S0014-5793(02)03049-1
Reference
  Authors
Hu Y, Ge W, Wang X, Sutendra G, Zhao K, Dedeic Z, Slee EA, Baer C, Lu X
  Title
Caspase cleavage of iASPP potentiates its ability to inhibit p53 and NF-kappaB.
  Journal
Oncotarget 6:42478-90 (2015)
DOI:10.18632/oncotarget.6478
Related
pathway
xco04110  Cell cycle
xco04210  Apoptosis
xco04218  Cellular senescence
KO pathway
ko04115   

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