SSDB Best Search Result

Entry:pmm:PMM0729 (545 a.a.)
Name:possible ATP-dependent DNA ligase

Search Result : 218 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sur:STAUR_6767 DNA ligase, ATP-dependent                           531     1426     0.407      541     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531     1411     0.396      541     
xcc:XCC1290 DNA ligase                                             534     1350     0.399      546     
rsp:RSP_2413 DNA ligase                                            533     1343     0.399      541     
xom:XOO1771 DNA ligase                                             534     1342     0.393      544     
xac:XAC1341 DNA ligase                                             534     1340     0.392      544     
sml:Smlt3530 putative ATP-DEPENDENT DNA LIGASE LIGB (PO            535     1338     0.392      548     
zga:ZOBELLIA_2113 DNA ligase                                       554     1334     0.413      552     
psb:Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DN            567     1327     0.383      579     
phe:Phep_2562 ATP dependent DNA ligase                             535     1325     0.393      547     
ssy:SLG_11070 DNA ligase                                           538     1324     0.381      546     
ppu:PP_1105 putative DNA ligase, ATP-dependent                     552     1318     0.390      564     
pst:PSPTO_4135 DNA ligase, ATP-dependent                           571     1308     0.379      583     
bxe:Bxe_B1315 DNA ligase (ATP)                                     558     1274     0.378      555     
reu:Reut_B3895 DNA ligase (ATP)                                    551     1248     0.362      560     
sjp:SJA_C1-17220 ATP-dependent DNA ligase                          527      948     0.312      544     
swi:Swit_3979 DNA ligase (ATP)                                     532      939     0.315      549     
nar:Saro_0068 DNA ligase (ATP)                                     531      919     0.321      558     
mlo:mll5481 probable DNA ligase                                    541      895     0.324      550     
ret:RHE_CH01164 probable DNA ligase (ATP) protein                  541      880     0.328      545     
atu:Atu0840 ATP-dependent DNA ligase                               541      880     0.330      549     
sme:SMc03177 Putative DNA ligase                                   537      871     0.327      554     
pde:Pden_0412 ATP dependent DNA ligase                             514      866     0.314      545     
azc:AZC_0393 putative ATP dependent DNA ligase                     552      864     0.323      567     
rle:RL1294 putative DNA ligase                                     541      864     0.320      557     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      862     0.321      564     
sno:Snov_0068 ATP dependent DNA ligase                             568      857     0.310      567     
xau:Xaut_1470 ATP dependent DNA ligase                             542      842     0.314      564     
rpa:TX73_004135 ATP-dependent DNA ligase                           621      824     0.360      419     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      798     0.351      419     
bja:bll1144 ORF_ID:bll1144; putative ATP dependent DNA             625      797     0.354      418     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      575     0.273      571     
mma:MM_2714 ATP-dependent DNA ligase                    K10747     568      574     0.305      413     
mba:Mbar_A1899 DNA ligase (ATP)                         K10747     568      566     0.271      510     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      565     0.270      486     
ton:TON_1515 thermostable DNA ligase                    K10747     562      565     0.258      565     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      564     0.258      565     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      560     0.264      481     
pfu:PF1635 DNA ligase (lig)                             K10747     561      555     0.271      428     
pab:PAB2002 lig DNA ligase                              K10747     559      555     0.266      481     
mac:MA_2571 DNA ligase (ATP)                            K10747     568      555     0.284      486     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      547     0.268      489     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      532     0.256      562     
mth:MTH_1580 DNA ligase                                 K10747     561      523     0.271      442     
afu:AF_0623 DNA ligase (lig)                            K10747     556      506     0.278      410     
hma:rrnAC0463 DNA ligase                                K10747     554      480     0.258      400     
sgr:SGR_6320 putative DNA ligase                                   511      479     0.249      418     
sro:Sros_7176 ATP-dependent DNA ligase                             508      477     0.253      447     
tac:Ta1148 DNA ligase related protein                   K10747     588      467     0.270      503     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      464     0.305      315     
hal:VNG_0881G DNA ligase                                K10747     561      463     0.248      403     
pto:PTO0672 DNA ligase                                  K10747     590      460     0.269      442     
sma:SAVERM_7136 putative DNA ligase                                512      457     0.284      306     
sgu:SGLAU_04800 putative DNA ligase                                512      453     0.249      429     
scl:sce6857 DNA ligase                                             533      444     0.250      404     
sco:SCO1202 putative DNA ligase                                    512      441     0.271      306     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      437     0.254      590     
sct:SCAT_0666 putative DNA ligase                                  517      436     0.238      537     
kfl:Kfla_3406 DNA ligase I, ATP-dependent Dnl1                     517      431     0.246      451     
zma:100383890 uncharacterized protein LOC100383890      K10747     909      426     0.257      467     
vvi:100256907 DNA ligase 1                              K10747     782      426     0.300      360     
sly:101262281 DNA ligase 1                              K10747     802      424     0.286      420     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      422     0.244      586     
sot:102604298 DNA ligase 1-like                         K10747     802      419     0.276      420     
mmi:MMAR_1623 ATP-dependent DNA ligase LigB                        501      419     0.240      409     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      419     0.251      459     
rha:RHA1_ro01648 DNA ligase (ATP)                                  503      413     0.266      406     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      412     0.242      598     
sto:STK_02230 DNA ligase                                K10747     600      412     0.237      590     
osa:4348965 DNA ligase 1 isoform X1                     K10747     916      411     0.274      368     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      411     0.265      392     
ccyc:SCMU_30200 DNA ligase                                         511      410     0.264      416     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      410     0.282      358     
mul:MUL_3413 ATP-dependent DNA ligase LigB                         513      405     0.237      409     
nta:107828011 DNA ligase 1                              K10747     775      403     0.267      420     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      401     0.239      599     
msm:MSMEG_2277 DNA ligase I, ATP-dependent                         509      399     0.261      418     
cin:100170070 DNA ligase 3                              K10776     854      397     0.242      587     
vg:3654672 Emiliania huxleyi virus 86; putative DNA lig            622      396     0.262      466     
mtr:25502748 DNA ligase 1                                          713      395     0.292      346     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      395     0.265      358     
csv:101213447 DNA ligase 1                              K10747     801      392     0.283      350     
mtu:Rv3062 DNA ligase                                              507      392     0.242      422     
mtc:MT3148 DNA ligase                                              507      392     0.242      422     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      392     0.233      592     
nve:5509532 DNA ligase 3                                K10776     946      391     0.232      591     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      388     0.232      598     
sen:SACE_0911 DNA ligase I, ATP-dependent (dnl1)                   510      387     0.261      417     
cit:102628869 DNA ligase 1                              K10747     806      386     0.274      354     
gmx:100783155 DNA ligase 1                              K10747     776      384     0.266      380     
ase:ACPL_1298 ATP-dependent DNA ligase                             515      383     0.246      414     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      383     0.245      547     
mva:Mvan_2025 DNA ligase I, ATP-dependent Dnl1                     534      381     0.247      430     
smo:SELMODRAFT_119719 hypothetical protein                         638      380     0.280      347     
nfa:NFA_52520 putative ATP-dependent DNA ligase                    523      380     0.243      449     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      379     0.250      420     
nca:Noca_2845 DNA ligase I, ATP-dependent Dnl1                     509      378     0.296      314     
tca:658633 DNA ligase                                   K10747     756      377     0.258      446     
ath:AT1G08130 DNA ligase 1                              K10747     790      375     0.276      344     
rcu:8275235 DNA ligase 1                                K10747     796      374     0.253      482     
mdm:103423359 DNA ligase 1-like                         K10747     796      370     0.245      478     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      370     0.252      369     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      370     0.261      360     
amd:AMED_8064 ATP-dependent DNA ligase                             510      366     0.240      425     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      364     0.246      501     
yli:2908208 DNA ligase 1                                K10747     711      358     0.247      438     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      356     0.253      423     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      352     0.244      349     
mmu:16881 DNA ligase 1                                  K10747     916      352     0.267      345     
rno:81513 DNA ligase 1                                  K10747     913      351     0.264      345     
pai:PAE0833 DNA ligase                                  K10747     584      351     0.254      457     
bmor:101739679 DNA ligase 3                             K10776     998      350     0.230      566     
ppp:112290811 DNA ligase 1                              K10747     776      350     0.233      476     
cne:CNI04170 DNA ligase, putative                       K10747     803      350     0.282      355     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      348     0.242      418     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      347     0.263      338     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      347     0.244      349     
gpo:GPOL_c02790 DNA ligase Lig                                     511      343     0.234      431     
mgr:MGG_06370 DNA ligase 1                              K10747     896      343     0.230      478     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      341     0.253      364     
ehi:EHI_111060 DNA ligase                               K10747     685      338     0.225      600     
hth:HTH_1466 DNA ligase                                            572      337     0.226      584     
dme:Dmel_CG5602 DNA ligase 1                                       747      336     0.244      332     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      334     0.258      337     
ani:ANIA_06069 hypothetical protein                     K10747     932      334     0.235      494     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      334     0.233      494     
xtr:100271763 DNA ligase 1                              K10747    1040      333     0.257      335     
cpoc:100734013 DNA ligase 1                             K10747     919      332     0.258      337     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      331     0.264      337     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      330     0.258      337     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      330     0.261      337     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      330     0.261      337     
dre:556995 DNA ligase 1                                 K10747    1058      329     0.260      338     
aae:aq_1394 DNA ligase (ATP dependent)                             585      329     0.227      587     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      328     0.260      339     
ola:101156760 DNA ligase 3                              K10776    1011      327     0.228      591     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      327     0.222      536     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      326     0.258      337     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      325     0.259      347     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      325     0.252      337     
amj:102566879 DNA ligase 1                              K10747     954      325     0.253      344     
smm:Smp_019840.1 DNA ligase I, putative                            783      325     0.247      538     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      324     0.252      337     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      322     0.240      480     
tcr:506835.120 DNA ligase I                             K10747     701      321     0.258      396     
tru:101068311 DNA ligase 3                              K10776     998      320     0.226      592     
bta:100124507 DNA ligase 1                              K10747     916      320     0.249      337     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      318     0.236      478     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      318     0.257      350     
ncr:NCU06481 DNA ligase                                 K10747     923      318     0.235      486     
ssc:100520434 DNA ligase 1                              K10747     923      318     0.251      339     
pmur:107285325 DNA ligase 1                             K10747     944      316     0.251      346     
pif:PITG_04709 DNA ligase, putative                               3896      315     0.248      339     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      315     0.248      351     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      313     0.237      480     
xla:398275 ligase III, DNA, ATP-dependent L homeolog    K10776     988      313     0.210      586     
clv:102083602 DNA ligase 3                              K10776     994      310     0.228      589     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      310     0.251      347     
fgr:FGSG_05453 DNA ligase                               K10747     867      308     0.237      480     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      308     0.245      347     
tva:5466150 DNA ligase 1/3 family member family                    679      306     0.233      408     
dne:112995498 DNA ligase 1                              K10747     868      301     0.238      344     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      301     0.237      410     
mdo:100616962 DNA ligase 1-like                                    632      301     0.254      393     
pti:PHATR_51005 hypothetical protein                    K10747     651      300     0.219      448     
tps:THAPSDRAFT_268404 ligase                            K10747     633      299     0.245      351     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979      293     0.222      590     
stp:Strop_1546 ATP dependent DNA ligase                            369      283     0.255      329     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      282     0.225      511     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      273     0.273      300     
tgo:7896565 DNA ligase 1, putative                                1331      268     0.223      328     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      266     0.288      243     
rer:RER_pREL1-01040 putative ATP-dependent DNA ligase   K01971     279      265     0.252      290     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      262     0.258      310     
cpy:Cphy_1729 DNA ligase D                              K01971     813      244     0.252      369     
gla:GL50803_007649 DNA ligase (ATP)                                810      241     0.229      354     
oih:OB3034 hypothetical conserved protein               K01971     595      233     0.248      202     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      231     0.236      347     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      227     0.281      256     
mab:MAB_0279c Probable DNA ligase LigC                             343      226     0.239      339     
dsy:DSY0616 hypothetical protein                        K01971     818      225     0.262      325     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      201     0.258      337     
chy:CHY_0026 putative DNA ligase, ATP-dependent                    270      201     0.296      186     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      198     0.245      335     
bsu:BSU20500 DNA ligase-like protein LigB                          270      186     0.247      304     
pjd:Pjdr2_1127 ATP dependent DNA ligase                            287      183     0.294      194     
ser:SERP1534 DNA ligase, ATP-dependent                             432      162     0.243      441     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      152     0.290      221     
cdf:CD630_20770 Dihydroorotate dehydrogenase, catalytic K00226     361      151     0.255      145     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      148     0.232      271     
tma:TM1202 maltose ABC transporter, permease protein    K10110     823      148     0.209      397     
cst:CLOST_1795 transcriptional regulator of heat-shock  K03705     348      138     0.215      279     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      132     0.230      304     
pma:Pro_1192 Predicted oxidoreductase                   K05275     319      132     0.220      327     
cbo:CBO2761 udp-N-acetylglucosamine--n-acetylmuramyl-(p K02563     354      129     0.250      248     
yen:YE4062 putative exported protein                    K07290     706      128     0.266      199     
pam:PANA_2588 PupA                                      K02014     841      125     0.219      429     
elm:ELI_1817 hypothetical protein                       K02035     527      124     0.214      276     
vpa:VP1477 DNA ligase                                   K26441     280      121     0.225      276     
afn:Acfer_0542 Cof-like hydrolase                                  269      118     0.300      140     
plu:plu3639 Protein transport protein HofB              K02504     480      117     0.192      224     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      117     0.233      258     
pgi:PG_0724 prolyl oligopeptidase family protein                   648      116     0.196      326     
vch:VC_1542 DNA ligase                                  K26441     282      114     0.231      277     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      112     0.199      301     
kpn:KPN_02256 hypothetical protein                                 297      110     0.232      151     
avn:Avin_48030 aldehyde dehydrogenase (NAD+)            K12254     497      109     0.312      109     
lin:lin2577 similar to protease [bacteriophage bIL285]  K06904     194      109     0.232      177     
vfi:VF_1450 DNA ligase                                  K26441     285      107     0.231      264     
ana:alr3407 similar to abortive phage resistance protei            201      105     0.225      138     
afr:AFE_1283 conserved hypothetical protein                        269      104     0.247      154     
hin:HI_1296 nuclease, putative                                     178      103     0.299      97      
eca:ECA3105 general secretion pathway protein H         K02457     188      102     0.224      192     
gvi:gsr3778 ORF_ID:gsr3778; unknown protein                         87      101     0.314      70      
dds:Ddes_0390 nitroreductase                                       274       99     0.240      104     
gtn:GTNG_2605 hypothetical protein                                  53       83     0.294      51      
syp:SYNPCC7002_C0011 hypothetical protein                           63       79     0.300      60      
bce:BC3403 hypothetical protein                                     59       76     0.386      57      

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