SSDB Best Search Result

Entry:rca:Rcas_3449 (544 a.a.)
Name:ATP dependent DNA ligase

Search Result : 200 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531     1997     0.556      540     
sur:STAUR_6767 DNA ligase, ATP-dependent                           531     1983     0.550      540     
ssy:SLG_11070 DNA ligase                                           538     1903     0.545      547     
rsp:RSP_2413 DNA ligase                                            533     1902     0.539      540     
bxe:Bxe_B1315 DNA ligase (ATP)                                     558     1876     0.530      570     
reu:Reut_B3895 DNA ligase (ATP)                                    551     1853     0.535      563     
xcc:XCC1290 DNA ligase                                             534     1835     0.530      545     
ppu:PP_1105 putative DNA ligase, ATP-dependent                     552     1797     0.524      567     
pst:PSPTO_4135 DNA ligase, ATP-dependent                           571     1786     0.514      584     
psb:Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DN            567     1779     0.514      582     
xom:XOO1771 DNA ligase                                             534     1766     0.510      545     
sml:Smlt3530 putative ATP-DEPENDENT DNA LIGASE LIGB (PO            535     1747     0.511      546     
xac:XAC1341 DNA ligase                                             534     1741     0.506      545     
phe:Phep_2562 ATP dependent DNA ligase                             535     1740     0.472      540     
zga:ZOBELLIA_2113 DNA ligase                                       554     1661     0.469      546     
swi:Swit_3979 DNA ligase (ATP)                                     532     1192     0.414      556     
pde:Pden_0412 ATP dependent DNA ligase                             514     1192     0.405      543     
sno:Snov_0068 ATP dependent DNA ligase                             568     1171     0.417      571     
sjp:SJA_C1-17220 ATP-dependent DNA ligase                          527     1114     0.384      550     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541     1109     0.399      557     
azc:AZC_0393 putative ATP dependent DNA ligase                     552     1089     0.401      576     
xau:Xaut_1470 ATP dependent DNA ligase                             542     1087     0.390      567     
nar:Saro_0068 DNA ligase (ATP)                                     531     1085     0.395      560     
rpa:TX73_004135 ATP-dependent DNA ligase                           621     1084     0.390      623     
sme:SMc03177 Putative DNA ligase                                   537     1082     0.385      558     
mlo:mll5481 probable DNA ligase                                    541     1071     0.376      556     
ret:RHE_CH01164 probable DNA ligase (ATP) protein                  541     1057     0.382      558     
atu:Atu0840 ATP-dependent DNA ligase                               541     1044     0.384      558     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635     1019     0.361      628     
rle:RL1294 putative DNA ligase                                     541     1017     0.374      559     
bja:bll1144 ORF_ID:bll1144; putative ATP dependent DNA             625     1015     0.369      631     
sma:SAVERM_7136 putative DNA ligase                                512      620     0.333      403     
sgu:SGLAU_04800 putative DNA ligase                                512      596     0.319      464     
sco:SCO1202 putative DNA ligase                                    512      580     0.304      464     
mma:MM_2714 ATP-dependent DNA ligase                    K10747     568      577     0.288      396     
mba:Mbar_A1899 DNA ligase (ATP)                         K10747     568      573     0.271      494     
mac:MA_2571 DNA ligase (ATP)                            K10747     568      563     0.268      477     
sgr:SGR_6320 putative DNA ligase                                   511      560     0.287      551     
ccyc:SCMU_30200 DNA ligase                                         511      555     0.322      494     
sro:Sros_7176 ATP-dependent DNA ligase                             508      552     0.294      442     
rha:RHA1_ro01648 DNA ligase (ATP)                                  503      551     0.322      425     
hal:VNG_0881G DNA ligase                                K10747     561      548     0.311      408     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      544     0.255      564     
sct:SCAT_0666 putative DNA ligase                                  517      543     0.301      551     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      543     0.267      562     
afu:AF_0623 DNA ligase (lig)                            K10747     556      534     0.246      561     
scl:sce6857 DNA ligase                                             533      532     0.271      506     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      528     0.253      557     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      523     0.310      432     
pfu:PF1635 DNA ligase (lig)                             K10747     561      523     0.253      561     
pab:PAB2002 lig DNA ligase                              K10747     559      517     0.252      564     
hma:rrnAC0463 DNA ligase                                K10747     554      514     0.289      418     
ase:ACPL_1298 ATP-dependent DNA ligase                             515      511     0.299      425     
sen:SACE_0911 DNA ligase I, ATP-dependent (dnl1)                   510      510     0.311      395     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      507     0.261      563     
msm:MSMEG_2277 DNA ligase I, ATP-dependent                         509      500     0.302      427     
nca:Noca_2845 DNA ligase I, ATP-dependent Dnl1                     509      498     0.302      440     
kfl:Kfla_3406 DNA ligase I, ATP-dependent Dnl1                     517      497     0.292      424     
mth:MTH_1580 DNA ligase                                 K10747     561      489     0.257      560     
ton:TON_1515 thermostable DNA ligase                    K10747     562      488     0.243      559     
mmi:MMAR_1623 ATP-dependent DNA ligase LigB                        501      486     0.288      427     
gpo:GPOL_c02790 DNA ligase Lig                                     511      481     0.314      405     
amd:AMED_8064 ATP-dependent DNA ligase                             510      480     0.287      422     
mul:MUL_3413 ATP-dependent DNA ligase LigB                         513      480     0.295      430     
mtu:Rv3062 DNA ligase                                              507      473     0.288      423     
mtc:MT3148 DNA ligase                                              507      473     0.288      423     
nfa:NFA_52520 putative ATP-dependent DNA ligase                    523      469     0.277      528     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      468     0.262      588     
tac:Ta1148 DNA ligase related protein                   K10747     588      466     0.250      591     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      446     0.261      429     
pai:PAE0833 DNA ligase                                  K10747     584      444     0.261      582     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      434     0.243      576     
hth:HTH_1466 DNA ligase                                            572      433     0.248      580     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      432     0.236      573     
mva:Mvan_2025 DNA ligase I, ATP-dependent Dnl1                     534      430     0.271      446     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      409     0.263      426     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      408     0.251      419     
pto:PTO0672 DNA ligase                                  K10747     590      408     0.265      423     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      407     0.272      464     
smm:Smp_019840.1 DNA ligase I, putative                            783      403     0.254      551     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      401     0.256      426     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      396     0.254      633     
sto:STK_02230 DNA ligase                                K10747     600      396     0.243      589     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      395     0.250      476     
ssc:100520434 DNA ligase 1                              K10747     923      394     0.256      634     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      386     0.256      624     
bta:100124507 DNA ligase 1                              K10747     916      386     0.251      633     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      384     0.251      637     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      380     0.251      633     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      378     0.253      633     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      377     0.254      615     
mmu:16881 DNA ligase 1                                  K10747     916      377     0.247      632     
cpoc:100734013 DNA ligase 1                             K10747     919      375     0.253      633     
pmur:107285325 DNA ligase 1                             K10747     944      372     0.254      480     
rno:81513 DNA ligase 1                                  K10747     913      369     0.247      632     
aae:aq_1394 DNA ligase (ATP dependent)                             585      366     0.238      584     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      365     0.285      369     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      364     0.256      461     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      360     0.245      478     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      360     0.289      370     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      359     0.219      581     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      358     0.253      633     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      358     0.254      633     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      356     0.254      633     
ola:101167483 DNA ligase 1                              K10747     993      355     0.250      472     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      352     0.254      633     
cin:100181519 DNA ligase 1-like                         K10747    1060      351     0.268      369     
nve:5510104 DNA ligase 1                                K10747     959      348     0.268      355     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      346     0.245      624     
dre:556995 DNA ligase 1                                 K10747    1058      346     0.260      369     
csv:101213447 DNA ligase 1                              K10747     801      345     0.241      473     
mtr:11410741 DNA ligase 1 isoform X1                    K10747     773      341     0.257      338     
nta:107828011 DNA ligase 1                              K10747     775      340     0.235      472     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      340     0.262      362     
ath:AT1G08130 DNA ligase 1                              K10747     790      339     0.246      476     
tva:5466150 DNA ligase 1/3 family member family                    679      336     0.256      387     
xtr:100271763 DNA ligase 1                              K10747    1040      336     0.250      356     
mdm:103423359 DNA ligase 1-like                         K10747     796      335     0.234      475     
amj:102566879 DNA ligase 1                              K10747     954      333     0.243      482     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      333     0.264      368     
yli:2908208 DNA ligase 1                                K10747     711      331     0.237      473     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      331     0.258      364     
bmor:101739080 DNA ligase 1 isoform X1                  K10747     885      329     0.251      471     
smo:SELMODRAFT_97073 hypothetical protein               K10747     638      329     0.236      471     
tca:658633 DNA ligase                                   K10747     756      329     0.233      463     
xla:397978 DNA ligase 1                                 K10747    1070      329     0.256      356     
sot:102604298 DNA ligase 1-like                         K10747     802      327     0.229      471     
sly:101262281 DNA ligase 1                              K10747     802      324     0.230      473     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      323     0.270      374     
vg:22109413 Rhizobium phage vB_RleM_PPF1; non-homologou K01971     348      320     0.289      329     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      320     0.261      368     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      318     0.265      370     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      317     0.245      367     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      317     0.249      583     
cne:CNI04170 DNA ligase, putative                       K10747     803      317     0.252      493     
dme:Dmel_CG5602 DNA ligase 1                                       747      317     0.243      497     
cit:102628869 DNA ligase 1                              K10747     806      313     0.252      361     
dne:112995498 DNA ligase 1                              K10747     868      312     0.246      483     
vvi:100256907 DNA ligase 1                              K10747     782      312     0.242      360     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      311     0.239      368     
tgo:7896565 DNA ligase 1, putative                                1331      310     0.290      314     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      309     0.249      361     
gmx:100803989 DNA ligase 1                                         701      308     0.265      324     
pif:PITG_04709 DNA ligase, putative                               3896      305     0.264      451     
ppp:112290811 DNA ligase 1                              K10747     776      305     0.237      465     
tps:THAPSDRAFT_268404 ligase                            K10747     633      303     0.266      365     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      303     0.280      329     
tcr:506835.120 DNA ligase I                             K10747     701      302     0.251      391     
rcu:8275235 DNA ligase 1                                K10747     796      301     0.244      360     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      301     0.302      338     
zma:100383890 uncharacterized protein LOC100383890      K10747     909      299     0.241      370     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      298     0.228      448     
mdo:100616962 DNA ligase 1-like                                    632      297     0.257      354     
ani:ANIA_06069 hypothetical protein                     K10747     932      297     0.245      482     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      297     0.246      483     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      295     0.249      370     
osa:4348965 DNA ligase 1 isoform X1                     K10747     916      294     0.227      529     
ehi:EHI_111060 DNA ligase                               K10747     685      287     0.229      490     
pti:PHATR_51005 hypothetical protein                    K10747     651      286     0.248      363     
mgr:MGG_06370 DNA ligase 1                              K10747     896      281     0.232      479     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      281     0.232      508     
stp:Strop_3968 ATP dependent DNA ligase                 K01971     312      281     0.285      309     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      276     0.209      459     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      271     0.255      365     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      271     0.264      330     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      269     0.228      478     
fgr:FGSG_05453 DNA ligase                               K10747     867      262     0.234      478     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      258     0.256      324     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      257     0.246      325     
cpy:Cphy_1729 DNA ligase D                              K01971     813      252     0.272      276     
dsy:DSY0616 hypothetical protein                        K01971     818      252     0.272      324     
ncr:NCU06481 DNA ligase                                 K10747     923      251     0.245      319     
gla:GL50803_007649 DNA ligase (ATP)                                810      246     0.262      386     
bsu:BSU20500 DNA ligase-like protein LigB                          270      241     0.252      305     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      233     0.250      284     
oih:OB3034 hypothetical conserved protein               K01971     595      231     0.259      274     
tru:101068311 DNA ligase 3                              K10776     998      228     0.246      334     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      228     0.256      516     
clv:102083602 DNA ligase 3                              K10776     994      223     0.221      502     
mab:MAB_0279c Probable DNA ligase LigC                             343      220     0.299      224     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979      216     0.217      502     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      213     0.311      338     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      204     0.215      316     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      200     0.296      304     
pjd:Pjdr2_4984 ATP dependent DNA ligase                 K01971     316      200     0.280      225     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      196     0.280      397     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      192     0.237      321     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      185     0.257      382     
chy:CHY_0026 putative DNA ligase, ATP-dependent                    270      175     0.254      205     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      146     0.246      268     
syf:Synpcc7942_1589 putative modulator of DNA gyrase    K03592     429      136     0.232      306     
syc:syc0046_c putative modulator of DNA gyrase          K03592     429      136     0.232      306     
cro:ROD_09841 conserved hypothetical protein            K09927     410      130     0.241      224     
vfi:VF_1450 DNA ligase                                  K26441     285      129     0.279      244     
tel:tll1028 ORF_ID:tll1028; hypothetical protein                   222      123     0.251      175     
sty:HCM2.0035c putative DNA ligase                                 440      122     0.239      356     
ypk:Y1095.pl unknown                                               365      114     0.250      252     
kpn:KPN_pKPN5p08215 hypothetical protein                           130      107     0.369      84      
cps:CPS_4894 conserved hypothetical protein             K03796     228      106     0.252      155     
wol:WD_0660 ribosomal protein S13                       K02952     122      103     0.328      61      

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