KEGG   PATHWAY: mjv04622
Entry
mjv04622                    Pathway                                
Name
RIG-I-like receptor signaling pathway - Manis javanica (Malayan pangolin)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
mjv04622  RIG-I-like receptor signaling pathway
mjv04622

Organism
Manis javanica (Malayan pangolin) [GN:mjv]
Gene
108384016  MAP3K1; mitogen-activated protein kinase kinase kinase 1 isoform X3 [KO:K04416] [EC:2.7.11.25]
108384893  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
108385472  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 isoform X2 [KO:K09578] [EC:5.2.1.8]
108385635  MAPK10; mitogen-activated protein kinase 10 isoform X4 [KO:K04440] [EC:2.7.11.24]
108386756  [KO:K11594] [EC:5.6.2.7]
108387798  [KO:K10652] [EC:2.3.2.27]
108388343  DHX58; ATP-dependent RNA helicase DHX58 [KO:K12649] [EC:5.6.2.6]
108388574  [KO:K11594] [EC:5.6.2.7]
108390202  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
108390300  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
108390345  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1 [KO:K03171]
108390896  NLRX1; NLR family member X1 [KO:K12653]
108390960  ZNFX1; NFX1-type zinc finger-containing protein 1 [KO:K27391]
108391706  NFKB1; nuclear factor NF-kappa-B p105 subunit [KO:K02580]
108392346  DDX3X; ATP-dependent RNA helicase DDX3X isoform X2 [KO:K11594] [EC:5.6.2.7]
108392383  TKFC; triokinase/FMN cyclase isoform X1 [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
108393592  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
108393859  MAVS; mitochondrial antiviral-signaling protein isoform X1 [KO:K12648]
108394635  MAPK13; mitogen-activated protein kinase 13 isoform X1 [KO:K04441] [EC:2.7.11.24]
108394636  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
108395444  NFKBIB; NF-kappa-B inhibitor beta [KO:K02581]
108395977  AZI2; 5-azacytidine-induced protein 2 isoform X1 [KO:K12651]
108396487  TBKBP1; TANK-binding kinase 1-binding protein 1 isoform X1 [KO:K12652]
108396943  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
108397005  RELA; transcription factor p65 isoform X1 [KO:K04735]
108397407  [KO:K05440]
108397408  [KO:K05440]
108397409  [KO:K05414]
108397877  TNF; tumor necrosis factor [KO:K03156]
108398051  SIKE1; suppressor of IKBKE 1 isoform X1 [KO:K12656]
108398727  [KO:K10030]
108399095  IFNK; interferon kappa [KO:K05441]
108399127  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
108399180  TANK; TRAF family member-associated NF-kappa-B activator isoform X1 [KO:K12650]
108399262  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
108399795  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
108400317  IRF3; interferon regulatory factor 3 isoform X1 [KO:K05411]
108400819  IKBKG; NF-kappa-B essential modulator isoform X1 [KO:K07210]
108400836  RIGI; antiviral innate immune response receptor RIG-I isoform X1 [KO:K12646] [EC:5.6.2.6]
108401442  FADD; FAS-associated death domain protein [KO:K02373]
108401472  CXCL10; C-X-C motif chemokine 10 [KO:K12671]
108402523  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
108402531  IFNB1; interferon beta [KO:K05415]
108404033  OTUD5; OTU domain-containing protein 5 isoform X1 [KO:K12655] [EC:3.4.19.12]
108404186  ATG12; ubiquitin-like protein ATG12 isoform X1 [KO:K08336]
108404750  CASP8; caspase-8 isoform X5 [KO:K04400] [EC:3.4.22.63]
108404932  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 isoform X1 [KO:K10652] [EC:2.3.2.27]
108405108  STING1; LOW QUALITY PROTEIN: stimulator of interferon genes protein [KO:K12654]
108405696  ISG15; ubiquitin-like protein ISG15 isoform X1 [KO:K12159]
108406440  CXCL8; interleukin-8 isoform X1 [KO:K10030]
108406584  TRAF3; TNF receptor-associated factor 3 isoform X3 [KO:K03174]
108406827  TRAF2; TNF receptor-associated factor 2 isoform X4 [KO:K03173] [EC:2.3.2.27]
108408539  [KO:K05440]
108408540  IFNE; LOW QUALITY PROTEIN: interferon epsilon [KO:K05442]
108408573  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD isoform X1 [KO:K08601] [EC:3.4.19.12]
108408637  IRF7; interferon regulatory factor 7 isoform X1 [KO:K09447]
108409113  IL12A; interleukin-12 subunit alpha [KO:K05406]
108409154  RNF125; E3 ubiquitin-protein ligase RNF125 isoform X3 [KO:K12170] [EC:2.3.2.27]
108409190  IL12B; interleukin-12 subunit beta [KO:K05425]
108409586  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
108409843  ATG5; autophagy protein 5 isoform X1 [KO:K08339]
140847551  [KO:K11594] [EC:5.6.2.7]
140847561  [KO:K11594] [EC:5.6.2.7]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
mjv04010  MAPK signaling pathway
mjv04120  Ubiquitin mediated proteolysis
mjv04210  Apoptosis
mjv04630  JAK-STAT signaling pathway
KO pathway
ko04622   

DBGET integrated database retrieval system