KEGG   PATHWAY: msyl03022
Entry
msyl03022                   Pathway                                
Name
Basal transcription factors - Malus sylvestris (European crab apple)
Class
Genetic Information Processing; Transcription
Pathway map
msyl03022  Basal transcription factors
msyl03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Malus sylvestris (European crab apple) [GN:msyl]
Gene
126616825  transcription initiation factor IIA large subunit-like isoform X1 [KO:K03122]
126589878  transcription initiation factor IIA large subunit-like [KO:K03122]
126632445  transcription initiation factor IIA subunit 2 [KO:K03123]
126582548  transcription initiation factor IIB-like [KO:K03124]
126582555  transcription initiation factor IIB-2-like [KO:K03124]
126598392  transcription initiation factor IIB-like [KO:K03124]
126600677  transcription initiation factor IIB-2 [KO:K03124]
126604942  plant-specific TFIIB-related protein 1 [KO:K03124]
126594553  transcription initiation factor IIB-2-like [KO:K03124]
126581887  transcription initiation factor IIB-2-like [KO:K03124]
126581888  transcription initiation factor IIB-2-like [KO:K03124]
126625242  transcription initiation factor IIB-like [KO:K03124]
126601008  TATA-box-binding protein 1 isoform X1 [KO:K03120]
126590848  TATA-box-binding protein-like [KO:K03120]
126593103  TATA-box-binding protein 1-like [KO:K03120]
126593121  TATA-box-binding protein 1-like [KO:K03120]
126619344  transcription initiation factor TFIID subunit 1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
126626007  transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
126617298  transcription initiation factor TFIID subunit 7-like [KO:K03132]
126591481  transcription initiation factor TFIID subunit 7-like [KO:K03132]
126582824  transcription initiation factor TFIID subunit 8-like [KO:K14649]
126610313  transcription initiation factor TFIID subunit 8-like [KO:K14649]
126586161  transcription initiation factor TFIID subunit 8-like [KO:K14649]
126617731  transcription initiation factor TFIID subunit 8-like [KO:K14649]
126593326  transcription initiation factor TFIID subunit 8-like [KO:K14649]
126621967  uncharacterized protein LOC126621967 [KO:K14649]
126630919  transcription initiation factor TFIID subunit 10-like [KO:K03134]
126603703  transcription initiation factor TFIID subunit 10-like [KO:K03134]
126632892  transcription initiation factor TFIID subunit 5 isoform X1 [KO:K03130]
126605506  transcription initiation factor TFIID subunit 5-like [KO:K03130]
126626401  transcription initiation factor TFIID subunit 4b isoform X1 [KO:K03129]
126614860  transcription initiation factor TFIID subunit 4b-like isoform X1 [KO:K03129]
126600787  transcription initiation factor TFIID subunit 12-like isoform X1 [KO:K03126]
126593771  transcription initiation factor TFIID subunit 12-like [KO:K03126]
126610389  transcription initiation factor TFIID subunit 12b-like [KO:K03126]
126583797  transcription initiation factor TFIID subunit 12b-like [KO:K03126]
126609914  transcription initiation factor TFIID subunit 6-like isoform X1 [KO:K03131]
126614471  transcription initiation factor TFIID subunit 6-like [KO:K03131]
126581841  transcription initiation factor TFIID subunit 6-like [KO:K03131]
126581937  transcription initiation factor TFIID subunit 9 [KO:K03133]
126587821  transcription initiation factor TFIID subunit 11 [KO:K03135]
126582024  transcription initiation factor TFIID subunit 13 [KO:K03127]
126626964  uncharacterized protein LOC126626964 [KO:K03136]
126600318  uncharacterized protein LOC126600318 [KO:K03136]
126626693  transcription initiation factor IIE subunit beta-like [KO:K03137]
126586200  transcription initiation factor IIF subunit alpha-like [KO:K03138]
126623951  transcription initiation factor IIF subunit alpha-like [KO:K03138]
126625579  uncharacterized protein LOC126625579 [KO:K03139] [EC:5.6.2.-]
126629202  uncharacterized protein LOC126629202 [KO:K03139] [EC:5.6.2.-]
126633160  transcription initiation factor IIF subunit beta-like [KO:K03139] [EC:5.6.2.-]
126605353  transcription initiation factor IIF subunit beta-like [KO:K03139] [EC:5.6.2.-]
126601677  general transcription and DNA repair factor IIH subunit TFB1-3-like isoform X1 [KO:K03141]
126632855  general transcription and DNA repair factor IIH subunit TFB1-3-like isoform X1 [KO:K03141]
126615146  general transcription factor IIH subunit 2 [KO:K03142]
126590830  general transcription factor IIH subunit 2-like isoform X1 [KO:K03142]
126603951  general transcription and DNA repair factor IIH subunit TFB4 [KO:K03143]
126587213  general transcription and DNA repair factor IIH subunit TFB2-like isoform X1 [KO:K03144]
126622368  general transcription and DNA repair factor IIH subunit TFB2-like [KO:K03144]
126626938  general transcription and DNA repair factor IIH helicase subunit XPB1 isoform X1 [KO:K10843] [EC:5.6.2.4]
126617330  general transcription and DNA repair factor IIH helicase subunit XPD-like [KO:K10844] [EC:5.6.2.3]
126620178  general transcription and DNA repair factor IIH subunit TFB5 [KO:K10845]
126594349  general transcription and DNA repair factor IIH subunit TFB5 [KO:K10845]
126626775  cyclin-dependent kinase D-3-like [KO:K02202] [EC:2.7.11.22 2.7.11.23]
126599561  cyclin-dependent kinase D-3-like [KO:K02202] [EC:2.7.11.22 2.7.11.23]
126587377  uncharacterized protein LOC126587377 [KO:K10842]
126602321  uncharacterized protein LOC126602321 [KO:K10842]
126594539  cyclin-H1-1 [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
msyl03020  RNA polymerase
msyl03420  Nucleotide excision repair
KO pathway
ko03022   
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