KEGG   PATHWAY: pvir00710
Entry
pvir00710                   Pathway                                
Name
Carbon fixation in photosynthetic organisms - Panicum virgatum (switchgrass)
Class
Metabolism; Energy metabolism
Pathway map
pvir00710  Carbon fixation in photosynthetic organisms
pvir00710

Module
pvir_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:pvir00710]
pvir_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pvir00710]
pvir_M00169  CAM (Crassulacean acid metabolism), light [PATH:pvir00710]
pvir_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:pvir00710]
pvir_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:pvir00710]
pvir_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:pvir00710]
Organism
Panicum virgatum (switchgrass) [GN:pvir]
Gene
120689563  LOW QUALITY PROTEIN: ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
11123559  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
120699285  ribulose bisphosphate carboxylase small chain A, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
120665718  ribulose bisphosphate carboxylase small chain A, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
120665837  ribulose bisphosphate carboxylase small chain A, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
120698927  ribulose bisphosphate carboxylase small chain A, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
120654766  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
120671580  phosphoglycerate kinase, cytosolic-like [KO:K00927] [EC:2.7.2.3]
120693532  phosphoglycerate kinase-like [KO:K00927] [EC:2.7.2.3]
120664222  phosphoglycerate kinase, cytosolic-like [KO:K00927] [EC:2.7.2.3]
120665049  phosphoglycerate kinase, chloroplastic-like [KO:K00927] [EC:2.7.2.3]
120650932  phosphoglycerate kinase-like isoform X1 [KO:K00927] [EC:2.7.2.3]
120698254  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
120654778  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like isoform X1 [KO:K00134] [EC:1.2.1.12]
120676902  glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic [KO:K00134] [EC:1.2.1.12]
120677587  glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic [KO:K00134] [EC:1.2.1.12]
120664810  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic-like [KO:K00134] [EC:1.2.1.12]
120665876  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like isoform X1 [KO:K00134] [EC:1.2.1.12]
120710743  glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic-like [KO:K00134] [EC:1.2.1.12]
120711278  glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic [KO:K00134] [EC:1.2.1.12]
120698009  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic-like [KO:K00134] [EC:1.2.1.12]
120642289  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [KO:K05298] [EC:1.2.1.13]
120688311  glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic-like [KO:K05298] [EC:1.2.1.13]
120647441  glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic-like [KO:K05298] [EC:1.2.1.13]
120681642  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic-like [KO:K05298] [EC:1.2.1.13]
120655726  fructose-bisphosphate aldolase 1, cytoplasmic [KO:K01623] [EC:4.1.2.13]
120701718  fructose-bisphosphate aldolase 1, cytoplasmic-like [KO:K01623] [EC:4.1.2.13]
120671942  fructose-bisphosphate aldolase, cytoplasmic isozyme [KO:K01623] [EC:4.1.2.13]
120643748  fructose-bisphosphate aldolase, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
120703885  fructose-bisphosphate aldolase 5, cytosolic-like [KO:K01623] [EC:4.1.2.13]
120673871  fructose-bisphosphate aldolase 2, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
120706186  fructose-bisphosphate aldolase 3, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
120663701  fructose-bisphosphate aldolase, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
120708978  fructose-bisphosphate aldolase, cytoplasmic isozyme-like [KO:K01623] [EC:4.1.2.13]
120696827  fructose-bisphosphate aldolase, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
120669706  fructose-bisphosphate aldolase 5, cytosolic-like [KO:K01623] [EC:4.1.2.13]
120684405  fructose-bisphosphate aldolase, chloroplastic [KO:K01623] [EC:4.1.2.13]
120671538  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
120672901  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
120704151  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
120690466  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
120708779  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
120665351  fructose-1,6-bisphosphatase, cytosolic-like isoform X1 [KO:K03841] [EC:3.1.3.11]
120695716  fructose-1,6-bisphosphatase, cytosolic-like isoform X1 [KO:K03841] [EC:3.1.3.11]
120652891  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
120698559  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
120640459  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
120671132  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
120702502  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
120681843  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
120673537  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
120708686  sedoheptulose-1,7-bisphosphatase, chloroplastic-like [KO:K01100] [EC:3.1.3.37]
120640496  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
120659474  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
120689880  probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [KO:K01807] [EC:5.3.1.6]
120663545  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
120649559  probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [KO:K01807] [EC:5.3.1.6]
120665274  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
120683304  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
120698480  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
120641638  phosphoribulokinase, chloroplastic-like [KO:K00855] [EC:2.7.1.19]
120656901  phosphoribulokinase, chloroplastic-like [KO:K00855] [EC:2.7.1.19]
120660385  uncharacterized protein LOC120660385 isoform X1 [KO:K00855] [EC:2.7.1.19]
120639584  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
120685437  triosephosphate isomerase, chloroplastic-like [KO:K01803] [EC:5.3.1.1]
120658160  triosephosphate isomerase, chloroplastic-like isoform X1 [KO:K01803] [EC:5.3.1.1]
120673407  triosephosphate isomerase, cytosolic-like [KO:K01803] [EC:5.3.1.1]
120675054  triosephosphate isomerase, cytosolic-like [KO:K01803] [EC:5.3.1.1]
120705986  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
120647172  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
120661171  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
120693364  ribulose-phosphate 3-epimerase, chloroplastic-like [KO:K01783] [EC:5.1.3.1]
120695792  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
120655242  phosphoenolpyruvate carboxylase 1 [KO:K01595] [EC:4.1.1.31]
120670681  phosphoenolpyruvate carboxylase 1-like isoform X1 [KO:K01595] [EC:4.1.1.31]
120672408  phosphoenolpyruvate carboxylase, housekeeping isozyme-like isoform X1 [KO:K01595] [EC:4.1.1.31]
120703648  phosphoenolpyruvate carboxylase 1 [KO:K01595] [EC:4.1.1.31]
120675608  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
120708105  phosphoenolpyruvate carboxylase, housekeeping isozyme [KO:K01595] [EC:4.1.1.31]
120695745  phosphoenolpyruvate carboxylase 1-like [KO:K01595] [EC:4.1.1.31]
120710501  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
120672328  aspartate aminotransferase, cytoplasmic-like [KO:K14454] [EC:2.6.1.1]
120708120  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
120690206  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
120652969  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
120687320  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
120687321  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
120661844  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
120694494  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
120679555  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
120651165  alanine aminotransferase 2 [KO:K00814] [EC:2.6.1.2]
120659204  glutamate--glyoxylate aminotransferase 1-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
120660037  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
120689161  pyruvate, phosphate dikinase 2-like [KO:K01006] [EC:2.7.9.1]
120665522  pyruvate, phosphate dikinase 2-like isoform X1 [KO:K01006] [EC:2.7.9.1]
120651960  pyruvate, phosphate dikinase 2-like isoform X1 [KO:K01006] [EC:2.7.9.1]
120698756  pyruvate, phosphate dikinase 2 isoform X1 [KO:K01006] [EC:2.7.9.1]
120672880  NADP-dependent malic enzyme, chloroplastic [KO:K00029] [EC:1.1.1.40]
120673278  NADP-dependent malic enzyme-like isoform X1 [KO:K00029] [EC:1.1.1.40]
120675619  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
120705740  NADP-dependent malic enzyme, chloroplastic-like [KO:K00029] [EC:1.1.1.40]
120707883  NADP-dependent malic enzyme-like isoform X1 [KO:K00029] [EC:1.1.1.40]
120708007  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
120664329  NADP-dependent malic enzyme, chloroplastic-like [KO:K00029] [EC:1.1.1.40]
120697627  NADP-dependent malic enzyme, chloroplastic-like [KO:K00029] [EC:1.1.1.40]
120679202  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
120713117  malate dehydrogenase [NADP] 1, chloroplastic [KO:K00051] [EC:1.1.1.82]
120655211  aspartate aminotransferase, mitochondrial-like [KO:K14455] [EC:2.6.1.1]
120695260  aspartate aminotransferase, mitochondrial-like [KO:K14455] [EC:2.6.1.1]
120642702  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
120689027  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
120650780  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
120682136  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
120700228  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
120689936  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
120661916  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
120678539  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
120649599  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
120664559  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
120664563  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
120694577  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
120667061  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
120667062  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
120697770  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
120697771  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
120712447  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
120685343  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
120688565  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
120644448  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like isoform X1 [KO:K00028] [EC:1.1.1.39]
120661403  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
120692869  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like isoform X1 [KO:K00028] [EC:1.1.1.39]
120650587  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
pvir00010  Glycolysis / Gluconeogenesis
pvir00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pvir00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

DBGET integrated database retrieval system