KEGG   PATHWAY: pvp05322
Entry
pvp05322                    Pathway                                
Name
Systemic lupus erythematosus - Pteropus vampyrus (large flying fox)
Description
Systemic lupus erythematosus (SLE) is a prototypic autoimmune disease characterised by the production of IgG autoantibodies that are specific for self-antigens, such as DNA, nuclear proteins and certain cytoplasmic components, in association with a diverse array of clinical manifestations. The primary pathological findings in patients with SLE are those of inflammation, vasculitis, immune complex deposition, and vasculopathy. Immune complexes comprising autoantibody and self-antigen is deposited particulary in the renal glomeruli and mediate a systemic inflammatory response by activating complement or via Fc{gamma}R-mediated neutrophil and macrophage activation. Activation of complement (C5) leads to injury both through formation of the membrane attack complex (C5b-9) or by generation of the anaphylatoxin and cell activator C5a. Neutrophils and macrophages cause tissue injury by the release of oxidants and proteases.
Class
Human Diseases; Immune disease
Pathway map
pvp05322  Systemic lupus erythematosus
pvp05322

Organism
Pteropus vampyrus (large flying fox) [GN:pvp]
Gene
105290437  complement C1q subcomponent subunit A-like [KO:K03986]
105290662  complement C1q subcomponent subunit A-like [KO:K03986]
105290439  C1QB; complement C1q subcomponent subunit B [KO:K03987]
105290438  C1QC; complement C1q subcomponent subunit C [KO:K03988]
105305295  C2; complement C2 [KO:K01332] [EC:3.4.21.43]
105305288  C4A; complement C4-A [KO:K03989]
111728728  histone H2A type 1 [KO:K11251]
105296308  histone H2A type 2-C-like [KO:K11251]
105296321  histone H2A type 1-A-like [KO:K11251]
105296322  histone H2A type 1-A [KO:K11251]
105296328  histone H2A type 1 [KO:K11251]
111728749  histone H2A type 2-C [KO:K11251]
105311102  histone H2A type 1-like [KO:K11251]
105299771  histone H2A-Bbd type 1 [KO:K11251]
111743863  histone H2A type 1-like [KO:K11251]
105296302  histone H2A type 1-H [KO:K11251]
105299998  LOW QUALITY PROTEIN: histone H2A type 3 [KO:K11251]
105300115  core histone macro-H2A.2 [KO:K11251]
105293587  core histone macro-H2A.1 isoform X1 [KO:K11251]
105308756  histone H2A.V [KO:K11251]
105308856  histone H2AX [KO:K11251]
105309239  histone H2A-Bbd type 2/3-like [KO:K11251]
105309975  histone H2A type 2-A isoform X2 [KO:K11251]
105302515  histone H2A-Bbd type 2/3 [KO:K11251]
105302777  histone H2A.J [KO:K11251]
105296305  histone H2B 1/2-like [KO:K11252]
105296306  histone H2B type 1 isoform X1 [KO:K11252]
105296318  histone H2B type 1 [KO:K11252]
105296327  histone H2B type 1-A [KO:K11252]
105308687  histone H2B type 2-E [KO:K11252]
105311488  histone H2B, gonadal-like [KO:K11252]
111739453  histone H2B-like [KO:K11252]
105309974  histone H2B type 2-F [KO:K11252]
105309978  histone H2B type 2-E [KO:K11252]
105310606  late histone H2B.L4-like [KO:K11252]
105311111  histone H2B type 1-A [KO:K11252]
105311489  histone H2B, gonadal-like [KO:K11252]
105311490  late histone H2B.L4-like [KO:K11252]
105311491  histone H2B-like [KO:K11252]
105311492  histone H2B-like [KO:K11252]
105311720  histone H2B type 1-K [KO:K11252]
105311756  histone H2B, sperm-like [KO:K11252]
105311769  histone H2B type 1-K-like [KO:K11252]
105303775  uncharacterized protein LOC105303775 [KO:K11252]
105296310  histone H3.1 [KO:K11253]
105307067  histone H3.3-like [KO:K11253]
105291893  histone H3.3-like [KO:K11253]
105296402  histone H3.1 [KO:K11253]
105292582  histone H3.3 [KO:K11253]
105299948  histone H3.1 [KO:K11253]
105293361  histone H3.3 [KO:K11253]
105309976  histone H3 [KO:K11253]
105302803  LOW QUALITY PROTEIN: histone H4 [KO:K11254]
105296307  histone H4 [KO:K11254]
105296311  histone H4 [KO:K11254]
111743870  histone H4 [KO:K11254]
105298226  SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' [KO:K11086]
105292281  SNRPD1; small nuclear ribonucleoprotein Sm D1 isoform X1 [KO:K11087]
105289353  SNRPD3; small nuclear ribonucleoprotein Sm D3 [KO:K11088]
105290959  GRIN2A; glutamate receptor ionotropic, NMDA 2A [KO:K05209]
105302783  GRIN2B; glutamate receptor ionotropic, NMDA 2B [KO:K05210]
105303675  TRIM21; E3 ubiquitin-protein ligase TRIM21 [KO:K10651] [EC:2.3.2.27]
105292597  TROVE2; 60 kDa SS-A/Ro ribonucleoprotein [KO:K11089]
105290570  SSB; lupus La protein [KO:K11090]
105300184  ACTN4; alpha-actinin-4 isoform X1 [KO:K05699]
105308049  ACTN1; alpha-actinin-1 isoform X1 [KO:K05699]
105305274  HLA class II histocompatibility antigen, DR alpha chain [KO:K06752]
105305333  DLA class II histocompatibility antigen, DR-1 beta chain [KO:K06752]
105301039  LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DP beta 1 chain [KO:K06752]
105301004  LOW QUALITY PROTEIN: DLA class II histocompatibility antigen, DR-1 beta chain-like [KO:K06752]
105300960  HLA class II histocompatibility antigen, DQ alpha 2 chain-like [KO:K06752]
105300961  HLA class II histocompatibility antigen, DQ beta 1 chain isoform X1 [KO:K06752]
105300962  HLA class II histocompatibility antigen, DQ alpha 2 chain-like [KO:K06752]
105300964  HLA class II histocompatibility antigen, DO beta chain [KO:K06752]
105300969  HLA class II histocompatibility antigen, DM beta chain [KO:K06752]
105300971  HLA class II histocompatibility antigen, DM alpha chain isoform X3 [KO:K06752]
105300973  HLA class II histocompatibility antigen, DO alpha chain isoform X1 [KO:K06752]
105309227  HLA class II histocompatibility antigen, DR beta 5 chain-like [KO:K06752]
105310204  SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [KO:K06752]
105310338  HLA class II histocompatibility antigen, DQ beta 1 chain-like [KO:K06752]
105302220  CD80; T-lymphocyte activation antigen CD80 [KO:K05412]
105288864  CD86; T-lymphocyte activation antigen CD86 [KO:K05413]
105298423  CD28; T-cell-specific surface glycoprotein CD28 isoform X1 [KO:K06470]
105307045  CD40LG; CD40 ligand [KO:K03161]
105298191  CD40; tumor necrosis factor receptor superfamily member 5 isoform X1 [KO:K03160]
105305325  TNF; tumor necrosis factor [KO:K03156]
105301262  IFNG; interferon gamma [KO:K04687]
105308926  IL10; interleukin-10 [KO:K05443]
105295937  C1R; LOW QUALITY PROTEIN: complement C1r subcomponent [KO:K01330] [EC:3.4.21.41]
105295936  C1S; complement C1s subcomponent isoform X1 [KO:K01331] [EC:3.4.21.42]
105301109  C3; complement C3 [KO:K03990]
105292665  C5; complement C5 [KO:K03994]
105299092  C6; complement component C6 [KO:K03995]
105299106  C7; complement component C7 [KO:K03996]
105298945  C8A; complement component C8 alpha chain [KO:K03997]
105298995  C8B; complement component C8 beta chain [KO:K03998]
105298571  C8G; complement component C8 gamma chain isoform X3 [KO:K03999]
105299112  C9; complement component C9 [KO:K04000]
105309409  cathepsin G-like [KO:K01319] [EC:3.4.21.20]
105309413  cathepsin G-like [KO:K01319] [EC:3.4.21.20]
105309973  high affinity immunoglobulin gamma Fc receptor I-like isoform X1 [KO:K06498]
105303404  low affinity immunoglobulin gamma Fc region receptor III-B-like isoform X1 [KO:K06463]
Compound
C00027  Hydrogen peroxide
C00434  Double-stranded DNA
C02737  Phosphatidylserine
Reference
  Authors
Rahman A, Isenberg DA.
  Title
Systemic lupus erythematosus.
  Journal
N Engl J Med 358:929-39 (2008)
DOI:10.1056/NEJMra071297
Reference
  Authors
Mok CC, Lau CS.
  Title
Pathogenesis of systemic lupus erythematosus.
  Journal
J Clin Pathol 56:481-90 (2003)
DOI:10.1136/jcp.56.7.481
Reference
  Authors
Clatworthy MR, Smith KG.
  Title
B cells in glomerulonephritis: focus on lupus nephritis.
  Journal
Semin Immunopathol 29:337-53 (2007)
DOI:10.1007/s00281-007-0092-1
Reference
PMID:8048228
  Authors
Couser WG.
  Title
New insights into mechanisms of immune glomerular injury.
  Journal
West J Med 160:440-6 (1994)
Reference
  Authors
Cook HT, Botto M.
  Title
Mechanisms of Disease: the complement system and the pathogenesis of systemic lupus erythematosus.
  Journal
Nat Clin Pract Rheumatol 2:330-7 (2006)
DOI:10.1038/ncprheum0191
Reference
  Authors
Carroll MC.
  Title
A protective role for innate immunity in systemic lupus erythematosus.
  Journal
Nat Rev Immunol 4:825-31 (2004)
DOI:10.1038/nri1456
Reference
  Authors
Sturfelt G, Truedsson L.
  Title
Complement and its breakdown products in SLE.
  Journal
Rheumatology (Oxford) 44:1227-32 (2005)
DOI:10.1093/rheumatology/keh719
Reference
  Authors
Lu L, Kaliyaperumal A, Boumpas DT, Datta SK.
  Title
Major peptide autoepitopes for nucleosome-specific T cells of human lupus.
  Journal
J Clin Invest 104:345-55 (1999)
DOI:10.1172/JCI6801
Reference
  Authors
Zieve GW, Khusial PR.
  Title
The anti-Sm immune response in autoimmunity and cell biology.
  Journal
Autoimmun Rev 2:235-40 (2003)
DOI:10.1016/S1568-9972(03)00018-1
Reference
  Authors
Scofield RH, Farris AD, Horsfall AC, Harley JB.
  Title
Fine specificity of the autoimmune response to the Ro/SSA and La/SSB ribonucleoproteins.
  Journal
Arthritis Rheum 42:199-209 (1999)
DOI:10.1002/1529-0131(199902)42:2<199::AID-ANR1>3.0.CO;2-1
Reference
  Authors
Hoffman RW.
  Title
T cells in the pathogenesis of systemic lupus erythematosus.
  Journal
Clin Immunol 113:4-13 (2004)
DOI:10.1016/j.clim.2004.05.001
Related
pathway
pvp04060  Cytokine-cytokine receptor interaction
pvp04514  Cell adhesion molecules
pvp04610  Complement and coagulation cascades
pvp04612  Antigen processing and presentation
pvp04630  JAK-STAT signaling pathway
pvp04660  T cell receptor signaling pathway
pvp04662  B cell receptor signaling pathway
pvp04670  Leukocyte transendothelial migration
KO pathway
ko05322   
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