KEGG   PATHWAY: spen00040
Entry
spen00040                   Pathway                                
Name
Pentose and glucuronate interconversions - Solanum pennellii
Class
Metabolism; Carbohydrate metabolism
Pathway map
spen00040  Pentose and glucuronate interconversions
spen00040

Module
spen_M00081  Pectin degradation [PATH:spen00040]
Organism
Solanum pennellii [GN:spen]
Gene
107013560  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
107013657  pectinesterase [KO:K01051] [EC:3.1.1.11]
107014365  pectinesterase [KO:K01051] [EC:3.1.1.11]
107012308  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107012505  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107015054  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107026320  pectinesterase/pectinesterase inhibitor PPE8B-like [KO:K01051] [EC:3.1.1.11]
107017361  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
107023433  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107025990  pectinesterase QRT1 [KO:K01051] [EC:3.1.1.11]
107031463  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107031464  probable pectinesterase/pectinesterase inhibitor 7 [KO:K01051] [EC:3.1.1.11]
107014455  pectinesterase/pectinesterase inhibitor U1 [KO:K01051] [EC:3.1.1.11]
107001937  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107004048  pectinesterase 31-like [KO:K01051] [EC:3.1.1.11]
107030253  probable pectinesterase/pectinesterase inhibitor 20 [KO:K01051] [EC:3.1.1.11]
107030828  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
107002144  pectinesterase 2 [KO:K01051] [EC:3.1.1.11]
107002150  probable pectinesterase/pectinesterase inhibitor 36 [KO:K01051] [EC:3.1.1.11]
107009959  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107019951  pectinesterase 1-like [KO:K01051] [EC:3.1.1.11]
107011677  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
107025694  pectinesterase QRT1-like [KO:K01051] [EC:3.1.1.11]
107020028  pectinesterase 1-like [KO:K01051] [EC:3.1.1.11]
107021180  probable pectinesterase/pectinesterase inhibitor 7 [KO:K01051] [EC:3.1.1.11]
107004949  pectinesterase 31-like [KO:K01051] [EC:3.1.1.11]
107002120  probable pectinesterase 56 [KO:K01051] [EC:3.1.1.11]
107010130  probable pectinesterase 30 [KO:K01051] [EC:3.1.1.11]
107021581  probable pectinesterase/pectinesterase inhibitor 33 [KO:K01051] [EC:3.1.1.11]
107024056  pectinesterase 2.1 [KO:K01051] [EC:3.1.1.11]
107024058  pectinesterase 3 [KO:K01051] [EC:3.1.1.11]
107024059  pectinesterase 1 [KO:K01051] [EC:3.1.1.11]
107005777  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
107020530  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107021670  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107011459  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107015110  probable pectinesterase/pectinesterase inhibitor 59 [KO:K01051] [EC:3.1.1.11]
107005861  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107013017  probable pectinesterase/pectinesterase inhibitor 17 [KO:K01051] [EC:3.1.1.11]
107008998  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107011486  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107015856  probable pectinesterase/pectinesterase inhibitor 25 [KO:K01051] [EC:3.1.1.11]
107022154  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
107007481  putative pectinesterase/pectinesterase inhibitor 22 [KO:K01051] [EC:3.1.1.11]
107031589  probable pectinesterase 56 [KO:K01051] [EC:3.1.1.11]
107003935  pectinesterase/pectinesterase inhibitor PPE8B-like [KO:K01051] [EC:3.1.1.11]
107032024  probable pectinesterase 56 [KO:K01051] [EC:3.1.1.11]
107020664  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
107006434  pectate lyase 1 [KO:K01728] [EC:4.2.2.2]
107015953  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
107029626  probable pectate lyase 12 isoform X1 [KO:K01728] [EC:4.2.2.2]
107009438  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
107014417  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
107029237  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
107011196  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
107009500  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
107009501  probable pectate lyase P18 [KO:K01728] [EC:4.2.2.2]
107021873  probable pectate lyase 18 [KO:K01728] [EC:4.2.2.2]
107031117  probable pectate lyase 8 [KO:K01728] [EC:4.2.2.2]
107009174  probable pectate lyase 16 [KO:K01728] [EC:4.2.2.2]
107010442  probable pectate lyase 16 [KO:K01728] [EC:4.2.2.2]
107023224  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
107023230  probable pectate lyase 8 isoform X1 [KO:K01728] [EC:4.2.2.2]
107012891  probable pectate lyase P56 [KO:K01728] [EC:4.2.2.2]
107013865  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
107015002  probable pectate lyase 18 [KO:K01728] [EC:4.2.2.2]
107012980  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
107020582  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
107005126  probable pectate lyase 13 isoform X1 [KO:K01728] [EC:4.2.2.2]
107019829  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
107029562  probable pectate lyase 8 isoform X1 [KO:K01728] [EC:4.2.2.2]
107016254  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
107016382  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107010753  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107010772  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107006897  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107006899  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107006933  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107031038  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
114076376  probable polygalacturonase At1g80170 [KO:K01184] [EC:3.2.1.15]
107028156  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107024781  polygalacturonase At1g48100-like [KO:K01184] [EC:3.2.1.15]
107006791  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107006806  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107027437  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107006838  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107006848  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107006851  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107006874  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
107032286  polygalacturonase-2 [KO:K01184] [EC:3.2.1.15]
107013827  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
107026698  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
107005897  polygalacturonase QRT2-like [KO:K01184] [EC:3.2.1.15]
107022765  polygalacturonase [KO:K01213] [EC:3.2.1.67]
107025284  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
107029783  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
107001957  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
107005867  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
107025541  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
114076006  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
107001312  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
107025165  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
107016662  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
107019993  polygalacturonase At1g48100 [KO:K01213] [EC:3.2.1.67]
107008640  glucuronokinase 1 [KO:K16190] [EC:2.7.1.43]
107018439  UDP-sugar pyrophosphorylase isoform X1 [KO:K12447] [EC:2.7.7.64]
107022673  UDP-glucose 6-dehydrogenase 5-like [KO:K00012] [EC:1.1.1.22]
107009687  UDP-glucose 6-dehydrogenase 2 [KO:K00012] [EC:1.1.1.22]
107011368  UDP-glucose 6-dehydrogenase 3 [KO:K00012] [EC:1.1.1.22]
107014631  UDP-glucose 6-dehydrogenase 1-like [KO:K00012] [EC:1.1.1.22]
107018863  UTP--glucose-1-phosphate uridylyltransferase-like [KO:K00963] [EC:2.7.7.9]
107004775  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
107007860  UTP--glucose-1-phosphate uridylyltransferase-like [KO:K00963] [EC:2.7.7.9]
107029195  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
107030686  aldose reductase [KO:K00002] [EC:1.1.1.2]
107018572  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
107014260  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
107026431  xylose isomerase [KO:K01805] [EC:5.3.1.5]
107022233  L-idonate 5-dehydrogenase-like [KO:K00008] [EC:1.1.1.14]
107007808  sorbitol dehydrogenase isoform X1 [KO:K00008] [EC:1.1.1.14]
107026233  FGGY carbohydrate kinase domain-containing protein isoform X1 [KO:K00875] [EC:2.7.1.47]
107004591  D-ribulose kinase isoform X1 [KO:K22935] [EC:2.7.1.47]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
spen00010  Glycolysis / Gluconeogenesis
spen00020  Citrate cycle (TCA cycle)
spen00030  Pentose phosphate pathway
spen00052  Galactose metabolism
spen00053  Ascorbate and aldarate metabolism
spen00500  Starch and sucrose metabolism
spen00520  Amino sugar and nucleotide sugar metabolism
spen00561  Glycerolipid metabolism
spen00562  Inositol phosphate metabolism
spen00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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