GFIT result for
dmat
|
GFIT result for
dmat
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| dmat:Dmats_24000 (178 a.a.) |
-- |
RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > dvc:Dvina_28740(167) | 167 | 97.6 | 1040 | 43 | <> | RNA polymerase sigma factor | |||
| > agra:AGRA3207_007836(197) | 173 | 54.9 | 599 | 30 | <> | RNA polymerase sigma factor | |||
| > amd:AMED_3760(193) | 179 | 55.9 | 595 | 21 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 179 | 55.9 | 595 | 22 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 179 | 55.9 | 595 | 21 | <> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 179 | 55.9 | 595 | 22 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > pfla:Pflav_031030(196) | 171 | 57.9 | 589 | 38 | <- | rpoE_13; RNA polymerase sigma24 factor | |||
| > cai:Caci_2526(198) | 179 | 54.2 | 585 | 26 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > fal:FRAAL4137(171) | 167 | 55.7 | 580 | 5 | <- | putative ECF sub-family Sigma-70 factor | |||
| > mnv:MNVI_26030(179) | 182 | 53.3 | 579 | 3 | <- | putative RNA polymerase sigma factor | |||
| > fri:FraEuI1c_2645(203) | 164 | 55.5 | 575 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > kut:JJ691_47140(187) | 166 | 56.6 | 575 | 14 | <- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mchi:AN480_22500(183) | 173 | 56.1 | 575 | 4 | <- | RNA polymerase subunit sigma | |||
| > mir:OCQ_44170(183) | 173 | 56.1 | 575 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 173 | 55.5 | 569 | 3 | <- | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 173 | 55.5 | 569 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msak:MSAS_45680(179) | 172 | 55.2 | 568 | 5 | <- | putative RNA polymerase sigma factor | |||
| > abry:NYE86_06135(189) | 169 | 54.4 | 565 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > aprt:MUY14_29390(193) | 170 | 52.9 | 564 | 15 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > nah:F5544_08000(204) | 169 | 53.8 | 564 | 8 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 177 | 53.1 | 561 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 176 | 54.0 | 560 | 3 | <- | RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 177 | 53.1 | 560 | 5 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 167 | 55.1 | 559 | 4 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmat:MMAGJ_46560(188) | 173 | 57.2 | 559 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 174 | 54.6 | 558 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 171 | 55.0 | 556 | 6 | <- | RNA polymerase subunit sigma | |||
| > mshg:MSG_00969(182) | 176 | 51.7 | 556 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 167 | 54.5 | 555 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 167 | 54.5 | 555 | 5 | <- | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 167 | 54.5 | 555 | 5 | <- | RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 176 | 54.0 | 555 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 167 | 54.5 | 555 | 5 | <- | hypothetical protein | |||
| > mye:AB431_03980(179) | 176 | 54.5 | 555 | 2 | <- | RNA polymerase sigma factor | |||
| > mabb:MASS_4680(184) | 179 | 52.0 | 554 | 2 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mabl:MMASJCM_4707(185) | 179 | 52.0 | 554 | 1 | <- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 179 | 52.0 | 554 | 1 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mpag:C0J29_05965(189) | 175 | 52.6 | 554 | 4 | <- | RNA polymerase subunit sigma | |||
| > amyc:CU254_17200(193) | 167 | 52.1 | 553 | 14 | <> | RNA polymerase subunit sigma | |||
| > mseo:MSEO_49050(182) | 160 | 57.5 | 553 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 178 | 52.2 | 552 | 2 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mrh:MycrhN_1984(183) | 167 | 53.3 | 551 | 3 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mab:MAB_4652(185) | 179 | 52.0 | 548 | 3 | <- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mpae:K0O64_03790(179) | 176 | 52.8 | 548 | 3 | <- | RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 176 | 53.4 | 547 | 4 | <- | putative RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 167 | 52.1 | 547 | 0 | -- | - | |||
| > msim:MSIM_15410(187) | 177 | 50.8 | 544 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mste:MSTE_04816(184) | 179 | 52.0 | 542 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 177 | 52.0 | 541 | 4 | <- | RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 177 | 53.1 | 541 | 7 | <- | RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 179 | 52.0 | 540 | 5 | <- | sigX; RNA polymerase sigma factor SigX | |||
| > ksl:OG809_22635(?) | 158 | 52.5 | 539 | 0 | -- | - | |||
| > mman:MMAN_31190(183) | 177 | 52.5 | 539 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mid:MIP_06466(153) | 151 | 59.6 | 534 | 2 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmuc:C1S78_017885(181) | 176 | 54.0 | 534 | 4 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 176 | 54.0 | 534 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 151 | 59.6 | 533 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 151 | 59.6 | 533 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msto:MSTO_28290(183) | 173 | 51.4 | 533 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 177 | 50.3 | 531 | 5 | <- | RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 168 | 54.2 | 528 | 5 | <- | RNA polymerase subunit sigma | |||
| > mpsc:MPSYJ_10150(168) | 161 | 54.7 | 528 | 5 | <- | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 180 | 53.3 | 525 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mmor:MMOR_08160(165) | 159 | 52.2 | 524 | 3 | <- | putative RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 179 | 50.3 | 523 | 3 | <- | RNA polymerase subunit sigma | |||
| > mcoo:MCOO_42530(167) | 162 | 53.1 | 521 | 2 | <- | putative RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 176 | 50.6 | 516 | 5 | <- | putative RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 165 | 51.5 | 512 | 4 | <- | hypothetical protein | |||
| > mmag:MMAD_32210(172) | 160 | 54.4 | 507 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msa:Mycsm_06152(165) | 161 | 51.6 | 493 | 5 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mkn:MKAN_19960(157) | 151 | 51.7 | 434 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > kbs:EPA93_28450(202) | 155 | 40.6 | 364 | 42 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 158 | 34.2 | 298 | 0 | -- | - | |||
| > coh:EAV92_18100(187) | 149 | 33.6 | 290 | 7 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > cth:Cthe_1809(179) | 171 | 30.4 | 275 | 4 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ctx:Clo1313_2483(179) | 171 | 30.4 | 275 | 4 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > strh:GXP74_36695(244) | 185 | 33.5 | 268 | 20 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > cmb:CSW64_11330(219) | 166 | 33.7 | 267 | 23 | -- | hypothetical protein | |||
| > thug:KNN16_11270(184) | 155 | 33.5 | 267 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > msag:GCM10017556_19080(303) | 175 | 35.4 | 264 | 156 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > euz:DVS28_a4764(206) | 180 | 31.1 | 263 | 21 | <- | RNA polymerase ECF-type sigma factor | |||
| > ima:PO878_06980(175) | 161 | 37.9 | 262 | 18 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 165 | 33.3 | 261 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcab:HXZ27_28245(322) | 182 | 35.7 | 260 | 237 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plab:C6361_11750(291) | 175 | 35.4 | 260 | 141 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 175 | 35.4 | 260 | 140 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdd:D9753_15265(259) | 181 | 33.1 | 260 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > saq:Sare_0420(310) | 171 | 35.7 | 259 | 55 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mau:Micau_5649(323) | 173 | 35.8 | 258 | 126 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 173 | 35.8 | 258 | 0 | -- | - | |||
| > plk:CIK06_26090(287) | 173 | 35.8 | 258 | 92 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > splu:LK06_013405(259) | 181 | 33.7 | 258 | 25 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stp:Strop_0350(311) | 171 | 35.7 | 258 | 58 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gtn:GTNG_1263(173) | 160 | 30.0 | 257 | 2 | -- | Putative RNA polymerase sigma factor | |||
| > mchl:PVK74_18390(323) | 173 | 35.8 | 257 | 120 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcra:ID554_18470(314) | 173 | 35.8 | 257 | 56 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mhaw:RMN56_14605(?) | 173 | 35.8 | 257 | 0 | -- | - | |||
| > micb:MicB006_4659(323) | 173 | 35.8 | 257 | 118 | -- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mprn:Q3V37_09750(?) | 173 | 35.8 | 257 | 0 | -- | - | |||
| > mtem:GCE86_22810(326) | 173 | 35.8 | 257 | 133 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |