GFIT result for
cai
|
GFIT result for
cai
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| cai:Caci_2526 (198 a.a.) |
-- |
RNA polymerase, sigma-24 subunit, ECF subfamily | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > abry:NYE86_06175(201) | 165 | 70.3 | 743 | 12 | -- | RNA polymerase sigma factor | |||
| > pfla:Pflav_031030(196) | 170 | 64.1 | 644 | 38 | -> | rpoE_13; RNA polymerase sigma24 factor | |||
| > mbrd:MBRA_05770(179) | 184 | 56.5 | 635 | 4 | -> | putative RNA polymerase sigma factor | |||
| > amd:AMED_3760(193) | 179 | 60.9 | 633 | 21 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 179 | 60.9 | 633 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 179 | 60.9 | 633 | 21 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 179 | 60.9 | 633 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > agra:AGRA3207_007836(197) | 179 | 58.7 | 627 | 30 | -> | RNA polymerase sigma factor | |||
| > aprt:MUY14_29390(193) | 189 | 58.2 | 624 | 15 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 189 | 56.1 | 624 | 5 | -> | putative RNA polymerase sigma factor | |||
| > msak:MSAS_45680(179) | 183 | 55.7 | 623 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 185 | 54.1 | 619 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 183 | 55.2 | 619 | 4 | -> | RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 185 | 54.6 | 618 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 172 | 57.6 | 617 | 2 | -> | putative RNA polymerase sigma factor | |||
| > fri:FraEuI1c_2645(203) | 176 | 59.7 | 616 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mlw:MJO58_05095(180) | 185 | 54.1 | 616 | 5 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > amyc:CU254_17200(193) | 188 | 57.4 | 614 | 14 | -> | RNA polymerase subunit sigma | |||
| > kut:JJ691_47140(187) | 194 | 55.7 | 613 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > msto:MSTO_28290(183) | 187 | 54.0 | 611 | 5 | -> | putative RNA polymerase sigma factor | |||
| > fal:FRAAL4137(171) | 170 | 59.4 | 610 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > mphu:MPHO_00980(181) | 185 | 54.6 | 609 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 185 | 54.6 | 608 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 178 | 55.6 | 607 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 164 | 60.4 | 605 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 184 | 53.3 | 603 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 184 | 53.3 | 603 | 5 | -> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 184 | 53.3 | 603 | 5 | -> | RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 182 | 56.6 | 603 | 4 | -> | RNA polymerase subunit sigma | |||
| > mdx:BTO20_26575(178) | 174 | 55.2 | 603 | 6 | <> | RNA polymerase subunit sigma | |||
| > mpa:MAP_4217(179) | 184 | 53.3 | 603 | 5 | -> | hypothetical protein | |||
| > mir:OCQ_44170(183) | 182 | 56.6 | 602 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > many:MANY_47430(178) | 180 | 55.6 | 598 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 184 | 52.7 | 598 | 4 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 183 | 55.7 | 597 | 3 | -> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 183 | 55.7 | 597 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mabb:MASS_1p0095(181) | 172 | 57.0 | 596 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mshg:MSG_00969(182) | 188 | 51.1 | 596 | 4 | -> | putative RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 179 | 55.3 | 593 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 194 | 52.1 | 593 | 4 | -> | RNA polymerase subunit sigma | |||
| > mman:MMAN_31190(183) | 194 | 53.1 | 587 | 3 | -> | putative RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 179 | 54.2 | 585 | 33 | -> | RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 179 | 53.6 | 584 | 3 | <> | RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 179 | 53.6 | 583 | 3 | <> | RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 179 | 54.2 | 583 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mpsc:MPSYJ_10150(168) | 167 | 55.7 | 583 | 5 | -> | putative RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 170 | 54.7 | 580 | 43 | -> | RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 187 | 52.4 | 578 | 0 | -- | - | |||
| > ksl:OG809_22635(?) | 164 | 57.3 | 574 | 0 | -- | - | |||
| > mrf:MJO55_27030(184) | 185 | 53.5 | 574 | 7 | -> | RNA polymerase sigma factor | |||
| > nah:F5544_08000(204) | 170 | 55.9 | 574 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 188 | 52.1 | 572 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mye:AB431_03980(179) | 180 | 53.9 | 572 | 2 | <> | RNA polymerase sigma factor | |||
| > mmat:MMAGJ_46560(188) | 166 | 54.8 | 571 | 6 | <> | putative RNA polymerase sigma factor | |||
| > mrh:MycrhN_1984(183) | 189 | 50.8 | 569 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mll:B1R94_04110(180) | 169 | 55.0 | 567 | 5 | <> | RNA polymerase subunit sigma | |||
| > msim:MSIM_15410(187) | 182 | 52.2 | 565 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 159 | 58.5 | 550 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 159 | 58.5 | 550 | 2 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 159 | 58.5 | 550 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > nsr:NS506_06042(190) | 170 | 53.5 | 545 | 4 | -> | hypothetical protein | |||
| > msa:Mycsm_06152(165) | 168 | 51.2 | 534 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > miz:BAB75_26190(184) | 164 | 54.3 | 530 | 3 | -> | RNA polymerase subunit sigma | |||
| > msal:DSM43276_04475(184) | 162 | 52.5 | 526 | 5 | -> | sigX; RNA polymerase sigma factor SigX | |||
| > mab:MAB_4652(185) | 171 | 52.0 | 522 | 3 | -> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mabl:MMASJCM_4707(185) | 171 | 50.9 | 517 | 1 | -> | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 171 | 50.9 | 517 | 1 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mste:MSTE_04816(184) | 162 | 51.9 | 514 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mmor:MMOR_08160(165) | 164 | 50.0 | 512 | 3 | -> | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 162 | 51.2 | 507 | 5 | -> | RNA polymerase sigma factor | |||
| > mkn:MKAN_19960(157) | 157 | 48.4 | 463 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > kbs:EPA93_28450(202) | 197 | 36.5 | 389 | 42 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 168 | 38.7 | 355 | 0 | -- | - | |||
| > noy:EXE57_18435(185) | 173 | 37.6 | 283 | 13 | -- | RNA polymerase sigma factor | |||
| > sacc:EYD13_01630(213) | 195 | 31.3 | 276 | 10 | -- | K03088 | rpoE | sigM1; RNA polymerase sigma factor SigM; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ami:Amir_6736(217) | 177 | 32.8 | 273 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 177 | 33.3 | 273 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svi:Svir_02810(223) | 210 | 30.5 | 273 | 10 | -- | K03088 | rpoE | RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aef:GEV26_15875(232) | 194 | 34.0 | 271 | 6 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mmar:MODMU_4999(210) | 194 | 32.0 | 271 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > athm:L1857_04835(215) | 190 | 30.5 | 269 | 22 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 189 | 32.8 | 269 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sesp:BN6_80910(214) | 175 | 33.7 | 267 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > euz:DVS28_a4764(206) | 191 | 35.1 | 266 | 21 | -- | RNA polymerase ECF-type sigma factor | |||
| > amq:AMETH_0444(215) | 186 | 30.6 | 265 | 27 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ume:RM788_23035(?) | 181 | 31.5 | 261 | 0 | -- | - | |||
| > actn:L083_7652(305) | 206 | 33.5 | 258 | 66 | -- | K03088 | rpoE | adsA; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aez:C3E78_15795(241) | 181 | 30.9 | 257 | 6 | -- | RNA polymerase subunit sigma-70 | |||
| > kal:KALB_8357(199) | 194 | 30.9 | 256 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cwo:Cwoe_1762(181) | 166 | 36.1 | 255 | 33 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > actl:L3i22_101990(317) | 209 | 33.0 | 254 | 65 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cpal:F1D97_07300(224) | 174 | 29.9 | 253 | 28 | -- | K03088 | rpoE | sigE; RNA polymerase sigma factor SigE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ica:Intca_0653(255) | 186 | 33.3 | 253 | 17 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > pmad:BAY61_01965(213) | 167 | 32.9 | 252 | 15 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > afs:AFR_40205(313) | 206 | 33.0 | 251 | 86 | -- | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cati:CS0771_08550(308) | 186 | 34.4 | 251 | 49 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aacd:LWP59_02100(196) | 163 | 31.9 | 250 | 26 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bse:Bsel_0096(184) | 153 | 32.7 | 250 | 7 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > kphy:AOZ06_50515(208) | 207 | 30.0 | 250 | 43 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acts:ACWT_7737(314) | 208 | 32.2 | 249 | 46 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |