GFIT result for
amm
|
GFIT result for
amm
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| amm:AMES_3715 (193 a.a.) |
-- |
rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > amd:AMED_3760(193) | 193 | 100.0 | 1254 | 21 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 193 | 100.0 | 1254 | 21 | <> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 193 | 100.0 | 1254 | 22 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amyc:CU254_17200(193) | 193 | 90.7 | 1117 | 14 | <> | RNA polymerase subunit sigma | |||
| > aprt:MUY14_29390(193) | 193 | 88.6 | 1109 | 15 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > kut:JJ691_47140(187) | 169 | 75.7 | 829 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > fal:FRAAL4137(171) | 166 | 73.5 | 770 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > fri:FraEuI1c_2645(203) | 187 | 67.4 | 757 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > agra:AGRA3207_007836(197) | 184 | 66.3 | 751 | 30 | <> | RNA polymerase sigma factor | |||
| > ksl:OG809_22635(?) | 159 | 74.8 | 743 | 0 | -- | - | |||
| > pfla:Pflav_031030(196) | 191 | 64.4 | 741 | 38 | -> | rpoE_13; RNA polymerase sigma24 factor | |||
| > mfj:MFLOJ_25060(180) | 172 | 64.0 | 686 | 5 | -> | putative RNA polymerase sigma factor | |||
| > msak:MSAS_45680(179) | 182 | 63.2 | 684 | 5 | -> | putative RNA polymerase sigma factor | |||
| > nah:F5544_08000(204) | 184 | 61.4 | 682 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 182 | 62.1 | 681 | 5 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 185 | 61.1 | 676 | 4 | -> | RNA polymerase subunit sigma | |||
| > maic:MAIC_48540(179) | 172 | 62.8 | 669 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 181 | 60.2 | 667 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 176 | 61.9 | 667 | 4 | -> | RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 181 | 60.2 | 665 | 3 | -> | RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 181 | 60.2 | 664 | 3 | -> | RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 175 | 60.6 | 662 | 7 | -> | RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 166 | 64.5 | 659 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 161 | 63.4 | 657 | 2 | -> | putative RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 181 | 60.2 | 657 | 2 | -> | RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 174 | 62.1 | 655 | 4 | -> | putative RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 175 | 61.1 | 653 | 3 | -> | RNA polymerase subunit sigma | |||
| > mnv:MNVI_26030(179) | 175 | 62.9 | 652 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 172 | 63.4 | 649 | 4 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mao:MAP4_4342(179) | 172 | 63.4 | 648 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 172 | 63.4 | 648 | 5 | -> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 172 | 63.4 | 648 | 5 | -> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 172 | 63.4 | 648 | 5 | -> | hypothetical protein | |||
| > mshg:MSG_00969(182) | 176 | 60.8 | 648 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 184 | 58.7 | 645 | 3 | -> | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 179 | 62.0 | 644 | 5 | -> | putative RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 175 | 60.0 | 643 | 5 | -> | sigX; RNA polymerase sigma factor SigX | |||
| > mchi:AN480_22500(183) | 184 | 59.2 | 642 | 4 | -> | RNA polymerase subunit sigma | |||
| > mdx:BTO20_26575(178) | 173 | 60.1 | 642 | 6 | -> | RNA polymerase subunit sigma | |||
| > mcb:Mycch_1362(194) | 180 | 57.8 | 641 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mmat:MMAGJ_46560(188) | 191 | 56.5 | 641 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mste:MSTE_04816(184) | 175 | 60.6 | 639 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mir:OCQ_44170(183) | 184 | 59.2 | 638 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 184 | 59.2 | 635 | 3 | -> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 184 | 59.2 | 635 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msao:MYCSP_21660(184) | 175 | 60.0 | 634 | 5 | -> | RNA polymerase sigma factor | |||
| > cai:Caci_2526(198) | 179 | 60.9 | 633 | 26 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mab:MAB_4652(185) | 175 | 58.9 | 632 | 3 | -> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mpsc:MPSYJ_10150(168) | 156 | 63.5 | 630 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 159 | 61.6 | 629 | 5 | -> | RNA polymerase subunit sigma | |||
| > mrh:MycrhN_1984(183) | 173 | 57.2 | 629 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > msim:MSIM_15410(187) | 179 | 58.7 | 629 | 4 | -> | putative RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 186 | 57.5 | 629 | 0 | -- | - | |||
| > mabb:MASS_4680(184) | 175 | 59.4 | 627 | 2 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mabl:MMASJCM_4707(185) | 175 | 59.4 | 627 | 1 | -> | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 175 | 59.4 | 627 | 1 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mmuc:C1S78_017885(181) | 170 | 60.6 | 626 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 172 | 56.4 | 623 | 5 | -> | putative RNA polymerase sigma factor | |||
| > abry:NYE86_06135(189) | 163 | 61.3 | 621 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 166 | 60.8 | 619 | 5 | -> | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 173 | 59.0 | 615 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 161 | 63.4 | 613 | 5 | -> | putative RNA polymerase sigma factor | |||
| > msa:Mycsm_06152(165) | 166 | 59.0 | 597 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > dmat:Dmats_24000(178) | 179 | 55.9 | 595 | 33 | -> | RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 182 | 57.7 | 595 | 4 | -> | hypothetical protein | |||
| > mmor:MMOR_08160(165) | 157 | 56.1 | 577 | 3 | -> | putative RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 164 | 57.3 | 574 | 43 | <> | RNA polymerase sigma factor | |||
| > mid:MIP_06466(153) | 155 | 61.9 | 572 | 2 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mia:OCU_42820(153) | 155 | 61.9 | 571 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 155 | 61.9 | 571 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mkn:MKAN_19960(157) | 144 | 59.0 | 510 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > kbs:EPA93_28450(202) | 159 | 39.0 | 348 | 42 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 167 | 35.3 | 329 | 0 | -- | - | |||
| > ami:Amir_6736(217) | 179 | 34.6 | 284 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 179 | 34.1 | 282 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actn:L083_7652(305) | 195 | 36.9 | 278 | 66 | -- | K03088 | rpoE | adsA; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ccaz:COUCH_03770(309) | 194 | 35.6 | 277 | 74 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mmar:MODMU_4999(210) | 187 | 36.4 | 277 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actr:Asp14428_53360(307) | 196 | 37.8 | 275 | 76 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > afs:AFR_40205(313) | 195 | 36.4 | 273 | 86 | -- | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acts:ACWT_7737(314) | 205 | 34.1 | 269 | 46 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aih:Aiant_37260(314) | 205 | 34.1 | 269 | 51 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aou:ACTOB_008204(?) | 204 | 32.8 | 269 | 0 | -- | - | |||
| > ase:ACPL_7868(314) | 204 | 32.8 | 269 | 47 | -- | K03088 | rpoE | adsA; RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cati:CS0771_08550(308) | 166 | 37.3 | 269 | 49 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 175 | 36.0 | 269 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ume:RM788_23035(?) | 181 | 34.8 | 268 | 0 | -- | - | |||
| > psuu:Psuf_027560(307) | 194 | 34.5 | 267 | 125 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actl:L3i22_101990(317) | 196 | 35.2 | 266 | 65 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ams:AMIS_75870(314) | 195 | 33.8 | 266 | 57 | -- | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ica:Intca_0653(255) | 157 | 36.3 | 264 | 17 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > rant:RHODO2019_01705(?) | 183 | 35.0 | 264 | 0 | -- | - | |||
| > asic:Q0Z83_094000(?) | 197 | 33.0 | 263 | 0 | -- | - | |||
| > kal:KALB_8357(199) | 168 | 35.1 | 262 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sti:Sthe_2346(181) | 148 | 37.8 | 262 | 12 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > gez:FE251_12500(183) | 172 | 37.2 | 260 | 7 | -- | sigE; RNA polymerase sigma factor SigE | |||
| > sesp:BN6_80910(214) | 155 | 35.5 | 257 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > noy:EXE57_18435(185) | 168 | 39.3 | 256 | 13 | -- | RNA polymerase sigma factor | |||
| > stsu:B7R87_19305(289) | 194 | 33.5 | 256 | 37 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pry:Prubr_31830(183) | 166 | 36.1 | 253 | 19 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |