GFIT result for
mcoo
|
GFIT result for
mcoo
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mcoo:MCOO_42530 (167 a.a.) |
-- |
putative RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mpaa:MKK62_19730(179) | 167 | 89.2 | 958 | 4 | <> | RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 166 | 85.5 | 922 | 4 | -> | putative RNA polymerase sigma factor | |||
| > msak:MSAS_45680(179) | 163 | 85.3 | 904 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 167 | 82.6 | 903 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 166 | 83.1 | 892 | 4 | -> | RNA polymerase subunit sigma | |||
| > mseo:MSEO_49050(182) | 157 | 87.9 | 892 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 160 | 83.1 | 870 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 168 | 81.5 | 868 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 168 | 81.5 | 868 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 163 | 82.2 | 865 | 4 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msto:MSTO_28290(183) | 157 | 86.0 | 865 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 163 | 82.2 | 864 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 163 | 82.2 | 864 | 5 | -> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 163 | 82.2 | 864 | 5 | -> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 163 | 82.2 | 864 | 5 | -> | hypothetical protein | |||
| > mlw:MJO58_05095(180) | 168 | 80.4 | 859 | 5 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 168 | 80.4 | 857 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 168 | 81.0 | 856 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mman:MMAN_31190(183) | 161 | 81.4 | 853 | 3 | -> | putative RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 160 | 81.2 | 843 | 4 | -> | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 172 | 79.1 | 836 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 167 | 78.4 | 836 | 4 | -> | RNA polymerase subunit sigma | |||
| > mir:OCQ_44170(183) | 167 | 78.4 | 832 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 167 | 78.4 | 832 | 3 | -> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 167 | 78.4 | 832 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > maic:MAIC_48540(179) | 163 | 73.6 | 804 | 4 | -> | putative RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 173 | 71.7 | 796 | 5 | -> | sigX; RNA polymerase sigma factor SigX | |||
| > mhev:MHEL_14370(179) | 163 | 73.0 | 790 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mabl:MMASJCM_4707(185) | 173 | 70.5 | 788 | 1 | -> | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 173 | 70.5 | 788 | 1 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mpae:K0O64_03790(179) | 163 | 72.4 | 786 | 3 | -> | RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 163 | 72.4 | 786 | 2 | -> | RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 166 | 73.5 | 785 | 3 | -> | RNA polymerase subunit sigma | |||
| > mdx:BTO20_26575(178) | 165 | 73.3 | 784 | 6 | -> | RNA polymerase subunit sigma | |||
| > mcro:MI149_04390(179) | 163 | 71.8 | 783 | 3 | -> | RNA polymerase sigma factor | |||
| > mste:MSTE_04816(184) | 166 | 72.3 | 780 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 173 | 69.4 | 776 | 3 | -> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mmag:MMAD_32210(172) | 161 | 74.5 | 774 | 5 | -> | putative RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 163 | 70.6 | 767 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 161 | 72.0 | 766 | 5 | -> | RNA polymerase subunit sigma | |||
| > mmat:MMAGJ_46560(188) | 160 | 73.1 | 765 | 6 | -> | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 160 | 73.8 | 762 | 5 | -> | RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 149 | 79.9 | 761 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 149 | 79.9 | 761 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 149 | 79.2 | 757 | 2 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mcb:Mycch_1362(194) | 162 | 71.6 | 736 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mrh:MycrhN_1984(183) | 158 | 64.6 | 705 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mkn:MKAN_19960(157) | 138 | 77.5 | 701 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > nyu:D7D52_36470(?) | 165 | 63.0 | 683 | 0 | -- | - | |||
| > msa:Mycsm_06152(165) | 165 | 60.0 | 682 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > nah:F5544_08000(204) | 164 | 63.4 | 682 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 161 | 63.4 | 664 | 7 | -> | RNA polymerase sigma factor | |||
| > amd:AMED_3760(193) | 161 | 63.4 | 657 | 21 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 161 | 63.4 | 657 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 161 | 63.4 | 657 | 21 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 161 | 63.4 | 657 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mpsc:MPSYJ_10150(168) | 163 | 59.5 | 655 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmor:MMOR_08160(165) | 165 | 58.8 | 652 | 3 | -> | putative RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 165 | 61.8 | 651 | 4 | -> | hypothetical protein | |||
| > amyc:CU254_17200(193) | 162 | 63.6 | 649 | 14 | -> | RNA polymerase subunit sigma | |||
| > kut:JJ691_47140(187) | 165 | 60.6 | 641 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > agra:AGRA3207_007836(197) | 167 | 62.3 | 640 | 30 | -> | RNA polymerase sigma factor | |||
| > aprt:MUY14_29390(193) | 158 | 62.7 | 626 | 15 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > ksl:OG809_22635(?) | 160 | 61.3 | 625 | 0 | -- | - | |||
| > cai:Caci_2526(198) | 172 | 57.6 | 617 | 26 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > pfla:Pflav_031030(196) | 165 | 57.0 | 607 | 38 | -> | rpoE_13; RNA polymerase sigma24 factor | |||
| > fal:FRAAL4137(171) | 168 | 56.0 | 592 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > fri:FraEuI1c_2645(203) | 166 | 54.2 | 589 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > abry:NYE86_06135(189) | 165 | 53.9 | 583 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 160 | 54.4 | 527 | 43 | -> | RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 162 | 53.1 | 521 | 33 | -> | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 158 | 43.7 | 379 | 42 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 170 | 34.1 | 341 | 0 | -- | - | |||
| > thug:KNN16_11270(184) | 174 | 39.1 | 282 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mdr:MDOR_06240(174) | 145 | 37.2 | 278 | 2 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 169 | 33.7 | 275 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgrg:L0C25_07670(?) | 165 | 33.9 | 267 | 0 | -- | - | |||
| > sesp:BN6_80910(214) | 155 | 32.9 | 263 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ami:Amir_6736(217) | 168 | 32.7 | 261 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 168 | 32.1 | 259 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 171 | 35.1 | 258 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mflv:NCTC10271_04125(176) | 153 | 33.3 | 254 | 7 | -- | K03088 | rpoE | sigM_2; sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sclf:BB341_16660(283) | 171 | 33.9 | 253 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kal:KALB_8357(199) | 169 | 33.1 | 252 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sals:SLNWT_2815(267) | 171 | 33.9 | 252 | 25 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sant:QR300_19755(?) | 171 | 34.5 | 252 | 0 | -- | - | |||
| > src:M271_22495(268) | 171 | 34.5 | 252 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svl:Strvi_0700(268) | 171 | 34.5 | 252 | 29 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actq:OG417_49605(?) | 163 | 35.6 | 251 | 0 | -- | - | |||
| > sauo:BV401_25345(268) | 171 | 34.5 | 251 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbh:SBI_06006(270) | 171 | 34.5 | 251 | 43 | -- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > schg:NRO40_17085(?) | 171 | 33.9 | 251 | 0 | -- | - | |||
| > sgj:IAG43_17895(281) | 171 | 33.9 | 251 | 44 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slia:HA039_14355(264) | 171 | 33.9 | 251 | 20 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smal:SMALA_4300(178) | 171 | 34.5 | 251 | 18 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > speu:CGZ69_20195(282) | 171 | 33.9 | 251 | 24 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spri:SPRI_3359(280) | 171 | 33.9 | 251 | 30 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sqz:FQU76_19775(290) | 171 | 33.9 | 251 | 36 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sroc:RGF97_18830(?) | 171 | 33.9 | 251 | 0 | -- | - | |||
| > sauh:SU9_015525(261) | 171 | 34.5 | 250 | 17 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |