GFIT result for
mll
|
GFIT result for
mll
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mll:B1R94_04110 (180 a.a.) |
-- |
RNA polymerase subunit sigma | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mhev:MHEL_14370(179) | 179 | 89.4 | 1037 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 179 | 86.0 | 1015 | 3 | <> | RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 179 | 86.6 | 1011 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 179 | 85.5 | 1009 | 3 | <> | RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 179 | 85.5 | 1004 | 2 | <> | RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 176 | 73.3 | 853 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 180 | 70.6 | 808 | 4 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mdx:BTO20_26575(178) | 181 | 71.3 | 807 | 6 | <> | RNA polymerase subunit sigma | |||
| > mao:MAP4_4342(179) | 180 | 70.6 | 806 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 180 | 70.6 | 806 | 5 | <- | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 180 | 70.6 | 806 | 5 | <- | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 180 | 70.6 | 806 | 5 | <- | hypothetical protein | |||
| > msak:MSAS_45680(179) | 180 | 67.8 | 792 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 176 | 68.8 | 782 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 184 | 66.3 | 782 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 181 | 68.0 | 780 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 176 | 68.2 | 779 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mmat:MMAGJ_46560(188) | 185 | 68.6 | 777 | 6 | <> | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 177 | 70.6 | 777 | 4 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 181 | 66.9 | 770 | 4 | <- | RNA polymerase subunit sigma | |||
| > mpaa:MKK62_19730(179) | 176 | 67.6 | 770 | 4 | <- | RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 177 | 70.1 | 767 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mcoo:MCOO_42530(167) | 161 | 72.0 | 766 | 2 | <- | putative RNA polymerase sigma factor | |||
| > mir:OCQ_44170(183) | 181 | 66.9 | 766 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mphu:MPHO_00980(181) | 177 | 70.1 | 766 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mmm:W7S_21510(183) | 181 | 66.9 | 764 | 3 | <- | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 181 | 66.9 | 764 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mshg:MSG_00969(182) | 170 | 68.2 | 761 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 168 | 68.5 | 754 | 4 | <- | RNA polymerase subunit sigma | |||
| > maub:MAUB_11840(185) | 184 | 69.0 | 751 | 6 | <- | putative RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 170 | 67.1 | 746 | 4 | <- | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 179 | 65.9 | 742 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 178 | 64.6 | 731 | 5 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 169 | 67.5 | 726 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 168 | 69.6 | 726 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 163 | 69.3 | 723 | 5 | <- | RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 173 | 66.5 | 719 | 2 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > miz:BAB75_26190(184) | 179 | 65.9 | 718 | 3 | <- | RNA polymerase subunit sigma | |||
| > mabl:MMASJCM_4707(185) | 181 | 63.5 | 715 | 1 | <- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 181 | 63.5 | 715 | 1 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > msal:DSM43276_04475(184) | 159 | 67.9 | 706 | 5 | <- | sigX; RNA polymerase sigma factor SigX | |||
| > mste:MSTE_04816(184) | 178 | 64.6 | 704 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 150 | 70.7 | 693 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 150 | 70.7 | 693 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mab:MAB_4652(185) | 181 | 62.4 | 690 | 3 | <- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mid:MIP_06466(153) | 150 | 70.0 | 689 | 2 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mrf:MJO55_27030(184) | 171 | 63.7 | 689 | 7 | <- | RNA polymerase sigma factor | |||
| > nah:F5544_08000(204) | 171 | 60.8 | 686 | 8 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mrh:MycrhN_1984(183) | 180 | 58.9 | 682 | 3 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mpsc:MPSYJ_10150(168) | 161 | 61.5 | 674 | 5 | <- | putative RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 168 | 63.7 | 670 | 0 | -- | - | |||
| > msa:Mycsm_06152(165) | 156 | 62.2 | 654 | 5 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mmor:MMOR_08160(165) | 163 | 59.5 | 648 | 3 | <- | putative RNA polymerase sigma factor | |||
| > pfla:Pflav_031030(196) | 169 | 58.0 | 633 | 38 | <- | rpoE_13; RNA polymerase sigma24 factor | |||
| > amd:AMED_3760(193) | 159 | 61.6 | 629 | 21 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 159 | 61.6 | 629 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 159 | 61.6 | 629 | 21 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 159 | 61.6 | 629 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mkn:MKAN_19960(157) | 151 | 63.6 | 628 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > agra:AGRA3207_007836(197) | 169 | 60.4 | 626 | 30 | <- | RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 168 | 61.9 | 625 | 4 | <- | hypothetical protein | |||
| > kut:JJ691_47140(187) | 180 | 57.2 | 623 | 14 | <- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > fal:FRAAL4137(171) | 171 | 56.7 | 617 | 5 | <- | putative ECF sub-family Sigma-70 factor | |||
| > aprt:MUY14_29390(193) | 182 | 55.5 | 606 | 15 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > amyc:CU254_17200(193) | 181 | 55.2 | 603 | 14 | <- | RNA polymerase subunit sigma | |||
| > ksl:OG809_22635(?) | 162 | 56.8 | 581 | 0 | -- | - | |||
| > fri:FraEuI1c_2645(203) | 165 | 57.0 | 572 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > cai:Caci_2526(198) | 169 | 55.0 | 567 | 26 | <> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > abry:NYE86_06135(189) | 161 | 54.7 | 553 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 168 | 54.2 | 528 | 33 | <- | RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 160 | 54.4 | 523 | 43 | <- | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 185 | 38.4 | 381 | 42 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 159 | 33.3 | 314 | 0 | -- | - | |||
| > sesp:BN6_80910(214) | 179 | 35.2 | 277 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aer:AERYTH_03095(216) | 180 | 35.0 | 276 | 6 | -- | RNA polymerase sigma70 factor | |||
| > awn:NQV15_15970(?) | 176 | 35.8 | 270 | 0 | -- | - | |||
| > sgal:CP966_20830(256) | 180 | 36.1 | 270 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sphw:NFX46_02755(259) | 180 | 36.1 | 270 | 28 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 154 | 38.3 | 270 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sact:DMT42_22150(261) | 180 | 36.7 | 269 | 23 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slon:LGI35_25495(263) | 180 | 36.7 | 269 | 29 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sseo:D0Z67_16470(261) | 180 | 36.1 | 269 | 15 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kbu:Q4V64_30035(?) | 180 | 36.7 | 268 | 0 | -- | - | |||
| > mmar:MODMU_4999(210) | 183 | 37.2 | 268 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nbt:KLP28_05090(289) | 162 | 34.6 | 268 | 0 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > saov:G3H79_15715(257) | 180 | 36.7 | 268 | 27 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > saqu:EJC51_27730(257) | 180 | 36.7 | 268 | 34 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > schf:IPT68_20630(256) | 180 | 36.7 | 268 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scir:STRCI_004614(257) | 180 | 36.7 | 268 | 40 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scoe:CP976_24770(256) | 180 | 36.7 | 268 | 30 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scw:TU94_18620(259) | 180 | 36.7 | 268 | 15 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scya:EJ357_26465(257) | 180 | 36.7 | 268 | 30 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdv:BN159_3983(257) | 180 | 36.7 | 268 | 39 | -- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfeu:IM697_41790(257) | 180 | 36.7 | 268 | 30 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfy:GFH48_18345(258) | 180 | 36.7 | 268 | 31 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgd:ELQ87_16910(257) | 180 | 36.7 | 268 | 20 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sge:DWG14_03706(257) | 180 | 36.7 | 268 | 30 | -- | K03088 | rpoE | sigL_2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shaw:CEB94_23325(256) | 180 | 36.7 | 268 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sjn:RI060_17780(?) | 180 | 36.7 | 268 | 0 | -- | - | |||
| > skg:KJK29_15545(?) | 180 | 36.7 | 268 | 0 | -- | - | |||