GFIT result for
dvc
|
GFIT result for
dvc
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| dvc:Dvina_28740 (167 a.a.) |
-- |
RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > dmat:Dmats_24000(178) | 167 | 97.6 | 1040 | 33 | <> | RNA polymerase sigma factor | |||
| > agra:AGRA3207_007836(197) | 166 | 55.4 | 589 | 30 | <> | RNA polymerase sigma factor | |||
| > fal:FRAAL4137(171) | 167 | 56.3 | 586 | 5 | <- | putative ECF sub-family Sigma-70 factor | |||
| > pfla:Pflav_031030(196) | 167 | 58.1 | 581 | 38 | <- | rpoE_13; RNA polymerase sigma24 factor | |||
| > cai:Caci_2526(198) | 170 | 54.7 | 580 | 26 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > kut:JJ691_47140(187) | 162 | 57.4 | 578 | 14 | <- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amd:AMED_3760(193) | 164 | 57.3 | 574 | 21 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 164 | 57.3 | 574 | 22 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 164 | 57.3 | 574 | 21 | <> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 164 | 57.3 | 574 | 22 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > fri:FraEuI1c_2645(203) | 162 | 55.6 | 569 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > abry:NYE86_06135(189) | 169 | 54.4 | 566 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 161 | 58.4 | 566 | 4 | <- | RNA polymerase subunit sigma | |||
| > mir:OCQ_44170(183) | 161 | 58.4 | 566 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 161 | 57.8 | 560 | 3 | <- | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 161 | 57.8 | 560 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msak:MSAS_45680(179) | 163 | 56.4 | 557 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 166 | 54.8 | 556 | 4 | <- | RNA polymerase subunit sigma | |||
| > mnv:MNVI_26030(179) | 168 | 53.0 | 555 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 160 | 57.5 | 554 | 5 | <- | putative RNA polymerase sigma factor | |||
| > aprt:MUY14_29390(193) | 155 | 54.8 | 551 | 15 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 168 | 54.2 | 551 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 162 | 54.9 | 551 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 158 | 56.3 | 550 | 4 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > amyc:CU254_17200(193) | 155 | 54.2 | 549 | 14 | <> | RNA polymerase subunit sigma | |||
| > mcro:MI149_04390(179) | 168 | 54.2 | 549 | 3 | <- | RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 168 | 54.2 | 549 | 5 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mmat:MMAGJ_46560(188) | 157 | 59.2 | 549 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mabb:MASS_4680(184) | 163 | 54.0 | 546 | 2 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mabl:MMASJCM_4707(185) | 163 | 54.0 | 546 | 1 | <- | RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 158 | 55.7 | 546 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 158 | 55.7 | 546 | 5 | <- | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 158 | 55.7 | 546 | 5 | <- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 163 | 54.0 | 546 | 1 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mpa:MAP_4217(179) | 158 | 55.7 | 546 | 5 | <- | hypothetical protein | |||
| > mhev:MHEL_14370(179) | 168 | 54.2 | 544 | 4 | <- | putative RNA polymerase sigma factor | |||
| > ksl:OG809_22635(?) | 162 | 51.2 | 543 | 0 | -- | - | |||
| > mbrd:MBRA_05770(179) | 160 | 55.6 | 542 | 4 | <- | putative RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 162 | 54.3 | 542 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 163 | 54.0 | 540 | 3 | <- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mste:MSTE_04816(184) | 163 | 54.6 | 540 | 4 | <- | putative RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 163 | 54.6 | 539 | 5 | <- | sigX; RNA polymerase sigma factor SigX | |||
| > mdx:BTO20_26575(178) | 160 | 55.6 | 538 | 6 | <- | RNA polymerase subunit sigma | |||
| > mpae:K0O64_03790(179) | 168 | 53.0 | 537 | 3 | <- | RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 166 | 54.8 | 537 | 7 | <- | RNA polymerase sigma factor | |||
| > mrh:MycrhN_1984(183) | 158 | 54.4 | 537 | 3 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > nah:F5544_08000(204) | 161 | 54.7 | 537 | 8 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 168 | 54.2 | 536 | 2 | <- | RNA polymerase sigma factor | |||
| > mid:MIP_06466(153) | 151 | 59.6 | 535 | 2 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mpsc:MPSYJ_10150(168) | 161 | 55.3 | 535 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 151 | 59.6 | 534 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 151 | 59.6 | 534 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > nyu:D7D52_36470(?) | 163 | 51.5 | 534 | 0 | -- | - | |||
| > maic:MAIC_48540(179) | 168 | 53.6 | 533 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 159 | 56.0 | 533 | 4 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 168 | 53.0 | 533 | 4 | <- | RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 159 | 56.0 | 533 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 164 | 54.9 | 530 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mmor:MMOR_08160(165) | 159 | 52.8 | 530 | 3 | <- | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 161 | 52.8 | 529 | 5 | <- | RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 160 | 54.4 | 527 | 2 | <- | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 163 | 55.2 | 524 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 160 | 54.4 | 523 | 5 | <- | RNA polymerase subunit sigma | |||
| > mcb:Mycch_1362(194) | 169 | 52.1 | 522 | 2 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > miz:BAB75_26190(184) | 163 | 52.8 | 521 | 3 | <- | RNA polymerase subunit sigma | |||
| > msto:MSTO_28290(183) | 159 | 54.1 | 517 | 5 | <- | putative RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 168 | 51.2 | 510 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 160 | 54.4 | 508 | 5 | <- | putative RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 161 | 50.9 | 499 | 4 | <- | hypothetical protein | |||
| > msa:Mycsm_06152(165) | 161 | 52.2 | 498 | 5 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mkn:MKAN_19960(157) | 136 | 52.2 | 421 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > kbs:EPA93_28450(202) | 155 | 41.3 | 369 | 42 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 158 | 34.2 | 299 | 0 | -- | - | |||
| > coh:EAV92_18100(187) | 149 | 33.6 | 294 | 7 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > cth:Cthe_1809(179) | 161 | 32.3 | 285 | 4 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ctx:Clo1313_2483(179) | 161 | 32.3 | 285 | 4 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > cmb:CSW64_11330(219) | 166 | 33.7 | 268 | 23 | -- | hypothetical protein | |||
| > thug:KNN16_11270(184) | 149 | 35.6 | 263 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > gtn:GTNG_1263(173) | 160 | 30.0 | 261 | 2 | -- | Putative RNA polymerase sigma factor | |||
| > kal:KALB_7495(175) | 146 | 37.7 | 261 | 24 | -- | hypothetical protein | |||
| > saq:Sare_0420(310) | 171 | 36.3 | 261 | 55 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mau:Micau_5649(323) | 173 | 36.4 | 260 | 126 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 173 | 36.4 | 260 | 0 | -- | - | |||
| > plk:CIK06_26090(287) | 173 | 36.4 | 260 | 92 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stp:Strop_0350(311) | 171 | 36.3 | 260 | 58 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strh:GXP74_36695(244) | 166 | 34.3 | 260 | 20 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mcab:HXZ27_28245(322) | 173 | 36.4 | 259 | 237 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mchl:PVK74_18390(323) | 173 | 36.4 | 259 | 120 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcra:ID554_18470(314) | 173 | 36.4 | 259 | 56 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mhaw:RMN56_14605(?) | 173 | 36.4 | 259 | 0 | -- | - | |||
| > micb:MicB006_4659(323) | 173 | 36.4 | 259 | 118 | -- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mprn:Q3V37_09750(?) | 173 | 36.4 | 259 | 0 | -- | - | |||
| > mtem:GCE86_22810(326) | 173 | 36.4 | 259 | 133 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mtua:CSH63_29090(327) | 173 | 36.4 | 259 | 149 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nth:Nther_2062(176) | 144 | 29.2 | 259 | 4 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > sted:SPTER_35610(195) | 179 | 30.2 | 259 | 1 | -- | sigD_2; ECF RNA polymerase sigma factor SigD | |||
| > stri:C7M71_017505(259) | 165 | 33.3 | 259 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ver:HUT12_28910(314) | 173 | 36.4 | 259 | 69 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > vma:VAB18032_01790(315) | 173 | 36.4 | 259 | 68 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actr:Asp14428_53360(307) | 168 | 35.7 | 257 | 76 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |