GFIT result for
nah
|
GFIT result for
nah
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| nah:F5544_08000 (204 a.a.) |
-- |
sigma-70 family RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mrh:MycrhN_1984(183) | 167 | 64.7 | 756 | 3 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mfj:MFLOJ_25060(180) | 177 | 64.4 | 747 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 176 | 63.6 | 745 | 5 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > msa:Mycsm_06152(165) | 157 | 68.2 | 740 | 5 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > nyu:D7D52_36470(?) | 176 | 63.6 | 737 | 0 | -- | - | |||
| > mnv:MNVI_26030(179) | 171 | 66.1 | 733 | 3 | <- | putative RNA polymerase sigma factor | |||
| > msak:MSAS_45680(179) | 173 | 63.6 | 729 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 180 | 63.9 | 724 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 172 | 65.7 | 722 | 4 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mao:MAP4_4342(179) | 172 | 65.7 | 721 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 172 | 65.7 | 721 | 5 | <- | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 172 | 65.7 | 721 | 5 | <- | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 172 | 65.7 | 721 | 5 | <- | hypothetical protein | |||
| > mpaa:MKK62_19730(179) | 177 | 62.7 | 720 | 4 | <- | RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 176 | 62.5 | 720 | 4 | <- | RNA polymerase subunit sigma | |||
| > mmat:MMAGJ_46560(188) | 189 | 59.8 | 718 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 177 | 62.1 | 715 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 186 | 62.4 | 712 | 7 | <- | RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 175 | 62.3 | 711 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mphu:MPHO_00980(181) | 174 | 62.1 | 710 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 172 | 62.8 | 710 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 181 | 61.9 | 708 | 4 | <- | RNA polymerase subunit sigma | |||
| > mmuc:C1S78_017885(181) | 176 | 62.5 | 708 | 4 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 175 | 62.3 | 708 | 5 | <- | putative RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 171 | 65.5 | 707 | 4 | <- | hypothetical protein | |||
| > mir:OCQ_44170(183) | 181 | 61.9 | 704 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mhev:MHEL_14370(179) | 171 | 63.2 | 701 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mmm:W7S_21510(183) | 177 | 62.1 | 700 | 3 | <- | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 177 | 62.1 | 700 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mye:AB431_03980(179) | 171 | 62.0 | 698 | 2 | <- | RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 171 | 63.2 | 694 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 175 | 62.3 | 692 | 2 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mman:MMAN_31190(183) | 181 | 62.4 | 692 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mabl:MMASJCM_4707(185) | 176 | 60.2 | 687 | 1 | <- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 176 | 60.2 | 687 | 1 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mpae:K0O64_03790(179) | 171 | 61.4 | 687 | 3 | <- | RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 176 | 59.7 | 687 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 171 | 60.8 | 686 | 3 | <- | RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 171 | 60.8 | 686 | 5 | <- | RNA polymerase subunit sigma | |||
| > mmor:MMOR_08160(165) | 155 | 63.2 | 684 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 176 | 59.7 | 683 | 3 | <- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amd:AMED_3760(193) | 184 | 61.4 | 682 | 21 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 184 | 61.4 | 682 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 184 | 61.4 | 682 | 21 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 184 | 61.4 | 682 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mcoo:MCOO_42530(167) | 164 | 63.4 | 682 | 2 | <- | putative RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 171 | 57.9 | 680 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 176 | 61.4 | 679 | 5 | <- | RNA polymerase sigma factor | |||
| > kut:JJ691_47140(187) | 180 | 61.1 | 678 | 14 | <- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > miz:BAB75_26190(184) | 176 | 61.4 | 678 | 3 | <- | RNA polymerase subunit sigma | |||
| > mpsc:MPSYJ_10150(168) | 157 | 63.7 | 677 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 176 | 59.7 | 676 | 5 | <- | sigX; RNA polymerase sigma factor SigX | |||
| > maub:MAUB_11840(185) | 182 | 60.4 | 674 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mste:MSTE_04816(184) | 176 | 59.7 | 673 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 160 | 66.2 | 659 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 178 | 56.7 | 658 | 6 | <- | RNA polymerase subunit sigma | |||
| > amyc:CU254_17200(193) | 193 | 59.1 | 656 | 14 | <- | RNA polymerase subunit sigma | |||
| > agra:AGRA3207_007836(197) | 171 | 59.1 | 651 | 30 | <- | RNA polymerase sigma factor | |||
| > pfla:Pflav_031030(196) | 173 | 59.0 | 648 | 38 | <- | rpoE_13; RNA polymerase sigma24 factor | |||
| > ksl:OG809_22635(?) | 160 | 65.6 | 647 | 0 | -- | - | |||
| > mia:OCU_42820(153) | 152 | 65.1 | 647 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 152 | 65.1 | 647 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 152 | 64.5 | 643 | 2 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > aprt:MUY14_29390(193) | 196 | 57.7 | 636 | 15 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > fal:FRAAL4137(171) | 169 | 59.8 | 629 | 5 | <- | putative ECF sub-family Sigma-70 factor | |||
| > fri:FraEuI1c_2645(203) | 179 | 57.5 | 612 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mkn:MKAN_19960(157) | 146 | 62.3 | 597 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > cai:Caci_2526(198) | 170 | 55.9 | 574 | 26 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > dmat:Dmats_24000(178) | 169 | 53.8 | 564 | 33 | <- | RNA polymerase sigma factor | |||
| > abry:NYE86_06135(189) | 179 | 50.3 | 559 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 161 | 54.7 | 537 | 43 | <- | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 158 | 40.5 | 376 | 42 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 159 | 32.1 | 314 | 0 | -- | - | |||
| > acht:bsdcttw_13770(182) | 146 | 36.3 | 274 | 4 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 196 | 31.6 | 271 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > coh:EAV92_18100(187) | 152 | 33.6 | 267 | 7 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > ami:Amir_6736(217) | 184 | 29.9 | 255 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 184 | 30.4 | 255 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kal:KALB_8357(199) | 194 | 34.0 | 250 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dhd:Dhaf_1091(169) | 154 | 31.8 | 249 | 6 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > dsy:DSY4232(169) | 154 | 31.8 | 249 | 7 | -- | hypothetical protein | |||
| > cth:Cthe_1809(179) | 148 | 33.8 | 248 | 4 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ctx:Clo1313_2483(179) | 148 | 33.8 | 248 | 4 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mthn:4412656_00899(174) | 167 | 33.5 | 247 | 3 | -- | K03088 | rpoE | sigM; sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gtn:GTNG_1263(173) | 170 | 30.6 | 245 | 2 | -- | Putative RNA polymerase sigma factor | |||
| > mdr:MDOR_06240(174) | 153 | 35.3 | 243 | 2 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mne:D174_06585(175) | 152 | 36.2 | 243 | 4 | -- | RNA polymerase sigma24 factor | |||
| > msei:MSEDJ_23740(174) | 168 | 33.9 | 243 | 6 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > myn:MyAD_06455(175) | 152 | 36.2 | 243 | 4 | -- | RNA polymerase sigma24 factor | |||
| > rant:RHODO2019_01705(?) | 163 | 34.4 | 243 | 0 | -- | - | |||
| > thug:KNN16_11270(184) | 181 | 33.7 | 243 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > sgrg:L0C25_07670(?) | 190 | 31.6 | 242 | 0 | -- | - | |||
| > jlv:G3257_14580(172) | 150 | 32.0 | 241 | 18 | -- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > mmar:MODMU_4999(210) | 181 | 34.8 | 241 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tis:P3962_00150(169) | 151 | 31.8 | 241 | 3 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > yia:LO772_19945(261) | 211 | 32.2 | 241 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bcop:JD108_07690(182) | 164 | 31.7 | 240 | 12 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mflv:NCTC10271_04125(176) | 152 | 35.5 | 240 | 7 | -- | K03088 | rpoE | sigM_2; sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sesp:BN6_80910(214) | 172 | 30.8 | 239 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sti:Sthe_2346(181) | 154 | 35.7 | 239 | 12 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||