GFIT result for
mshg
|
GFIT result for
mshg
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mshg:MSG_00969 (182 a.a.) |
-- |
putative RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > msak:MSAS_45680(179) | 181 | 87.8 | 1019 | 5 | <> | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 182 | 87.4 | 1013 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 183 | 85.8 | 993 | 5 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 182 | 86.3 | 993 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 183 | 84.2 | 972 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 183 | 83.1 | 961 | 3 | <> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 181 | 83.4 | 960 | 4 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mao:MAP4_4342(179) | 181 | 82.9 | 958 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 181 | 82.9 | 958 | 5 | <> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 181 | 82.9 | 958 | 5 | <> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 181 | 82.9 | 958 | 5 | <> | hypothetical protein | |||
| > mchi:AN480_22500(183) | 182 | 81.9 | 948 | 4 | <> | RNA polymerase subunit sigma | |||
| > msim:MSIM_15410(187) | 179 | 81.6 | 946 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mir:OCQ_44170(183) | 182 | 81.9 | 944 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 182 | 81.9 | 944 | 3 | <> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 182 | 81.9 | 944 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mbrd:MBRA_05770(179) | 181 | 81.2 | 923 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 182 | 80.8 | 914 | 4 | -> | RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 178 | 80.3 | 907 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 181 | 76.2 | 904 | 4 | -> | RNA polymerase subunit sigma | |||
| > mcoo:MCOO_42530(167) | 160 | 83.1 | 870 | 2 | -> | putative RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 182 | 74.7 | 854 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mphu:MPHO_00980(181) | 182 | 74.2 | 844 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 182 | 74.2 | 842 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 152 | 84.9 | 820 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 152 | 84.9 | 820 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 152 | 84.2 | 816 | 2 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmat:MMAGJ_46560(188) | 187 | 66.3 | 810 | 6 | -> | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 186 | 71.5 | 804 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mabl:MMASJCM_4707(185) | 186 | 68.8 | 797 | 1 | -> | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 186 | 68.8 | 797 | 1 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mmag:MMAD_32210(172) | 161 | 77.6 | 796 | 5 | -> | putative RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 177 | 70.6 | 794 | 5 | -> | sigX; RNA polymerase sigma factor SigX | |||
| > mste:MSTE_04816(184) | 177 | 70.1 | 794 | 4 | -> | putative RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 177 | 70.1 | 788 | 3 | -> | RNA polymerase subunit sigma | |||
| > mab:MAB_4652(185) | 186 | 67.7 | 781 | 3 | -> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msao:MYCSP_21660(184) | 177 | 68.9 | 779 | 5 | -> | RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 170 | 70.0 | 770 | 6 | -> | RNA polymerase subunit sigma | |||
| > mkn:MKAN_19960(157) | 153 | 79.1 | 769 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mll:B1R94_04110(180) | 170 | 68.2 | 761 | 5 | -> | RNA polymerase subunit sigma | |||
| > mhev:MHEL_14370(179) | 171 | 69.6 | 760 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 178 | 68.0 | 759 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > maic:MAIC_48540(179) | 171 | 70.2 | 756 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 171 | 69.6 | 753 | 2 | -> | RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 171 | 69.0 | 750 | 3 | -> | RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 171 | 69.0 | 747 | 3 | -> | RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 167 | 67.1 | 727 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mrh:MycrhN_1984(183) | 172 | 60.5 | 689 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > nah:F5544_08000(204) | 176 | 59.7 | 687 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 175 | 61.7 | 680 | 0 | -- | - | |||
| > mrf:MJO55_27030(184) | 175 | 60.6 | 664 | 7 | -> | RNA polymerase sigma factor | |||
| > mpsc:MPSYJ_10150(168) | 159 | 62.9 | 658 | 5 | -> | putative RNA polymerase sigma factor | |||
| > msa:Mycsm_06152(165) | 153 | 62.1 | 656 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > amd:AMED_3760(193) | 176 | 60.8 | 648 | 21 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 176 | 60.8 | 648 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 176 | 60.8 | 648 | 21 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 176 | 60.8 | 648 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > nsr:NS506_06042(190) | 175 | 60.6 | 641 | 4 | -> | hypothetical protein | |||
| > agra:AGRA3207_007836(197) | 179 | 59.8 | 635 | 30 | -> | RNA polymerase sigma factor | |||
| > kut:JJ691_47140(187) | 172 | 57.6 | 634 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mmor:MMOR_08160(165) | 153 | 59.5 | 631 | 3 | -> | putative RNA polymerase sigma factor | |||
| > amyc:CU254_17200(193) | 183 | 57.9 | 624 | 14 | -> | RNA polymerase subunit sigma | |||
| > ksl:OG809_22635(?) | 159 | 61.6 | 623 | 0 | -- | - | |||
| > fri:FraEuI1c_2645(203) | 170 | 57.1 | 612 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > aprt:MUY14_29390(193) | 180 | 57.8 | 607 | 15 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > pfla:Pflav_031030(196) | 182 | 56.0 | 606 | 38 | -> | rpoE_13; RNA polymerase sigma24 factor | |||
| > cai:Caci_2526(198) | 188 | 51.1 | 596 | 26 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > fal:FRAAL4137(171) | 161 | 58.4 | 583 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > abry:NYE86_06175(201) | 160 | 56.2 | 575 | 12 | -- | RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 176 | 51.7 | 556 | 33 | -> | RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 162 | 54.9 | 551 | 43 | -> | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 158 | 40.5 | 356 | 42 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 158 | 31.0 | 295 | 0 | -- | - | |||
| > thug:KNN16_11270(184) | 155 | 40.0 | 283 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > aeb:C6I20_00785(234) | 181 | 35.4 | 265 | 3 | -> | RNA polymerase subunit sigma-70 | |||
| > aer:AERYTH_03095(216) | 179 | 35.2 | 263 | 6 | -- | RNA polymerase sigma70 factor | |||
| > ssyi:EKG83_44655(214) | 181 | 33.1 | 262 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aef:GEV26_15875(232) | 183 | 35.0 | 261 | 6 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > aez:C3E78_15795(241) | 189 | 33.9 | 261 | 6 | -- | RNA polymerase subunit sigma-70 | |||
| > mdr:MDOR_06240(174) | 170 | 33.5 | 259 | 2 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgrg:L0C25_07670(?) | 157 | 34.4 | 259 | 0 | -- | - | |||
| > amyy:YIM_17750(170) | 147 | 36.1 | 258 | 62 | -- | K03088 | rpoE | sigL2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > awn:NQV15_15970(?) | 179 | 33.5 | 258 | 0 | -- | - | |||
| > sti:Sthe_2346(181) | 169 | 36.7 | 257 | 12 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mmar:MODMU_4999(210) | 175 | 34.3 | 256 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aab:A4R43_04640(161) | 147 | 35.4 | 255 | 48 | -- | K03088 | rpoE | RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rant:RHODO2019_01705(?) | 155 | 34.2 | 255 | 0 | -- | - | |||
| > stri:C7M71_017505(259) | 154 | 34.4 | 253 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ami:Amir_6736(217) | 181 | 33.1 | 252 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > coh:EAV92_18100(187) | 154 | 29.9 | 251 | 7 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > ncq:K6T13_01715(263) | 150 | 37.3 | 251 | 13 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 181 | 32.6 | 250 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nbt:KLP28_05090(289) | 187 | 31.0 | 250 | 0 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > sant:QR300_19755(?) | 154 | 34.4 | 250 | 0 | -- | - | |||
| > src:M271_22495(268) | 154 | 34.4 | 250 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svl:Strvi_0700(268) | 154 | 34.4 | 250 | 29 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sals:SLNWT_2815(267) | 153 | 35.3 | 249 | 25 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sauo:BV401_25345(268) | 154 | 34.4 | 249 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbh:SBI_06006(270) | 154 | 34.4 | 249 | 43 | -- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sesp:BN6_80910(214) | 155 | 33.5 | 249 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |