GFIT result for
mmuc
|
GFIT result for
mmuc
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mmuc:C1S78_017885 (181 a.a.) |
-- |
sigma-70 family RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mphu:MPHO_00980(181) | 181 | 99.4 | 1149 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 181 | 97.2 | 1120 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > maub:MAUB_11840(185) | 185 | 93.5 | 1086 | 6 | <> | putative RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 181 | 81.2 | 932 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 179 | 80.4 | 909 | 4 | <- | RNA polymerase sigma factor | |||
| > msak:MSAS_45680(179) | 181 | 77.3 | 902 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 184 | 77.2 | 892 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 178 | 78.1 | 887 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 181 | 76.8 | 878 | 4 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mao:MAP4_4342(179) | 181 | 76.8 | 877 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 181 | 76.8 | 877 | 5 | <- | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 181 | 76.8 | 877 | 5 | <- | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 181 | 76.8 | 877 | 5 | <- | hypothetical protein | |||
| > msto:MSTO_28290(183) | 183 | 75.4 | 876 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 180 | 75.0 | 871 | 5 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 168 | 81.5 | 868 | 2 | <- | putative RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 180 | 74.4 | 865 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 183 | 73.8 | 852 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mabl:MMASJCM_4707(185) | 182 | 76.4 | 850 | 1 | <- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 182 | 76.4 | 850 | 1 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > msal:DSM43276_04475(184) | 179 | 76.5 | 850 | 5 | <- | sigX; RNA polymerase sigma factor SigX | |||
| > mpag:C0J29_05965(189) | 174 | 77.0 | 845 | 4 | <- | RNA polymerase subunit sigma | |||
| > mste:MSTE_04816(184) | 179 | 77.1 | 843 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 182 | 74.2 | 842 | 4 | <- | putative RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 179 | 76.5 | 834 | 3 | <- | RNA polymerase subunit sigma | |||
| > mchi:AN480_22500(183) | 183 | 72.1 | 831 | 4 | <- | RNA polymerase subunit sigma | |||
| > mir:OCQ_44170(183) | 183 | 72.1 | 827 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mab:MAB_4652(185) | 182 | 73.6 | 825 | 3 | <- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mmm:W7S_21510(183) | 183 | 72.1 | 825 | 3 | <- | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 183 | 72.1 | 825 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msim:MSIM_15410(187) | 178 | 75.3 | 824 | 4 | <- | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 182 | 73.1 | 821 | 5 | <- | RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 183 | 73.2 | 815 | 6 | <- | RNA polymerase subunit sigma | |||
| > maic:MAIC_48540(179) | 181 | 70.2 | 798 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 163 | 77.9 | 798 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mmat:MMAGJ_46560(188) | 187 | 69.0 | 796 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 181 | 69.6 | 793 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 181 | 68.5 | 786 | 3 | <- | RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 181 | 68.0 | 780 | 3 | <- | RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 177 | 70.6 | 777 | 5 | <- | RNA polymerase subunit sigma | |||
| > mye:AB431_03980(179) | 181 | 68.0 | 775 | 2 | <- | RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 174 | 70.1 | 765 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 186 | 68.3 | 765 | 2 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mia:OCU_42820(153) | 153 | 76.5 | 737 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 153 | 76.5 | 737 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 153 | 75.8 | 733 | 2 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > nah:F5544_08000(204) | 176 | 62.5 | 708 | 8 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 182 | 61.5 | 704 | 7 | <- | RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 167 | 65.9 | 701 | 0 | -- | - | |||
| > mkn:MKAN_19960(157) | 152 | 72.4 | 699 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mrh:MycrhN_1984(183) | 168 | 62.5 | 699 | 3 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mpsc:MPSYJ_10150(168) | 160 | 63.8 | 687 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msa:Mycsm_06152(165) | 157 | 63.1 | 673 | 5 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > nsr:NS506_06042(190) | 167 | 64.1 | 658 | 4 | <- | hypothetical protein | |||
| > mmor:MMOR_08160(165) | 161 | 60.9 | 654 | 3 | <- | putative RNA polymerase sigma factor | |||
| > agra:AGRA3207_007836(197) | 183 | 57.9 | 634 | 30 | <- | RNA polymerase sigma factor | |||
| > pfla:Pflav_031030(196) | 170 | 58.8 | 627 | 38 | <- | rpoE_13; RNA polymerase sigma24 factor | |||
| > amd:AMED_3760(193) | 170 | 60.6 | 626 | 21 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 170 | 60.6 | 626 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 170 | 60.6 | 626 | 21 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 170 | 60.6 | 626 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > kut:JJ691_47140(187) | 179 | 58.1 | 620 | 14 | <- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > cai:Caci_2526(198) | 185 | 54.6 | 608 | 26 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > amyc:CU254_17200(193) | 174 | 58.0 | 603 | 14 | <- | RNA polymerase subunit sigma | |||
| > ksl:OG809_22635(?) | 164 | 57.9 | 596 | 0 | -- | - | |||
| > fal:FRAAL4137(171) | 169 | 55.0 | 587 | 5 | <- | putative ECF sub-family Sigma-70 factor | |||
| > aprt:MUY14_29390(193) | 171 | 57.3 | 584 | 15 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > fri:FraEuI1c_2645(203) | 169 | 53.8 | 573 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > abry:NYE86_06175(201) | 167 | 53.3 | 562 | 12 | -- | RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 176 | 54.0 | 534 | 33 | <- | RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 159 | 56.0 | 533 | 43 | <- | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 165 | 41.8 | 372 | 42 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 164 | 32.9 | 325 | 0 | -- | - | |||
| > sti:Sthe_2346(181) | 154 | 36.4 | 275 | 12 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > ssyi:EKG83_44655(214) | 182 | 30.8 | 270 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgrg:L0C25_07670(?) | 154 | 35.7 | 267 | 0 | -- | - | |||
| > thug:KNN16_11270(184) | 176 | 34.1 | 260 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > sesp:BN6_80910(214) | 179 | 30.7 | 253 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aeb:C6I20_00785(234) | 186 | 31.2 | 252 | 3 | -- | RNA polymerase subunit sigma-70 | |||
| > aer:AERYTH_03095(216) | 194 | 33.0 | 251 | 6 | -- | RNA polymerase sigma70 factor | |||
| > stri:C7M71_017505(259) | 180 | 34.4 | 251 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kphy:AOZ06_50515(208) | 182 | 31.3 | 250 | 43 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aez:C3E78_15795(241) | 171 | 32.2 | 249 | 6 | -- | RNA polymerase subunit sigma-70 | |||
| > ksk:KSE_33690(273) | 183 | 34.4 | 248 | 176 | -- | bldN; putative RNA polymerase ECF subfamily sigma factor | |||
| > salb:XNR_3527(268) | 185 | 33.5 | 247 | 18 | -- | K03088 | rpoE | BldN RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sky:D0C37_19235(268) | 185 | 33.5 | 247 | 15 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svio:HWN34_17960(268) | 185 | 33.5 | 247 | 21 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strh:GXP74_36695(244) | 181 | 34.8 | 246 | 20 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > fbo:J9309_00545(180) | 153 | 33.3 | 244 | 5 | -- | RNA polymerase sigma factor | |||
| > sact:DMT42_22150(261) | 159 | 36.5 | 244 | 23 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sast:CD934_17275(266) | 159 | 36.5 | 244 | 19 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sco:SCO3323(177) | 159 | 36.5 | 244 | 22 | -- | K03088 | rpoE | SCE68.21; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdd:D9753_15265(259) | 159 | 37.1 | 244 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgu:SGLAU_19145(256) | 159 | 36.5 | 244 | 23 | -- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slon:LGI35_25495(263) | 159 | 36.5 | 244 | 29 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slv:SLIV_21180(264) | 159 | 36.5 | 244 | 23 | -- | K03088 | rpoE | ECF sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sspo:DDQ41_18215(278) | 185 | 33.5 | 244 | 22 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ami:Amir_6736(217) | 155 | 32.9 | 243 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > coh:EAV92_18100(187) | 155 | 31.6 | 243 | 7 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > kbu:Q4V64_30035(?) | 159 | 36.5 | 243 | 0 | -- | - | |||