GFIT result for
mmat
|
GFIT result for
mmat
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mmat:MMAGJ_46560 (188 a.a.) |
-- |
putative RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mdx:BTO20_26575(178) | 177 | 80.2 | 882 | 6 | <> | RNA polymerase subunit sigma | |||
| > mman:MMAN_31190(183) | 188 | 70.7 | 836 | 3 | -> | putative RNA polymerase sigma factor | |||
| > msak:MSAS_45680(179) | 186 | 69.4 | 830 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 183 | 71.6 | 829 | 4 | -> | RNA polymerase subunit sigma | |||
| > mbrd:MBRA_05770(179) | 186 | 69.9 | 818 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 186 | 69.4 | 817 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 186 | 69.4 | 817 | 4 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mavi:RC58_21570(179) | 186 | 69.4 | 817 | 5 | -> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 186 | 69.4 | 817 | 5 | -> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 186 | 69.4 | 817 | 5 | -> | hypothetical protein | |||
| > mchi:AN480_22500(183) | 188 | 67.0 | 814 | 4 | -> | RNA polymerase subunit sigma | |||
| > mseo:MSEO_49050(182) | 179 | 69.8 | 813 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mir:OCQ_44170(183) | 188 | 67.0 | 810 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 189 | 67.2 | 810 | 3 | -> | igma-70 family RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 187 | 66.3 | 810 | 4 | -> | putative RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 189 | 67.2 | 810 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mlw:MJO58_05095(180) | 188 | 67.6 | 807 | 5 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 183 | 69.4 | 804 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 187 | 69.5 | 802 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > maic:MAIC_48540(179) | 185 | 71.9 | 802 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 184 | 67.9 | 801 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 174 | 73.0 | 801 | 3 | <> | RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 174 | 72.4 | 798 | 3 | <> | RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 188 | 67.0 | 797 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 187 | 69.0 | 796 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 174 | 72.4 | 795 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 174 | 71.8 | 790 | 2 | <> | RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 183 | 68.3 | 786 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 186 | 67.7 | 785 | 4 | -> | RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 187 | 68.4 | 785 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 185 | 68.6 | 777 | 5 | <> | RNA polymerase subunit sigma | |||
| > mmag:MMAD_32210(172) | 166 | 72.3 | 774 | 5 | -> | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 192 | 67.2 | 769 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 160 | 73.1 | 765 | 2 | -> | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 187 | 65.8 | 744 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > many:MANY_47430(178) | 180 | 66.1 | 738 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 153 | 71.9 | 735 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 153 | 71.9 | 735 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 153 | 71.2 | 731 | 2 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > nah:F5544_08000(204) | 189 | 59.8 | 718 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 167 | 67.1 | 715 | 3 | -> | RNA polymerase subunit sigma | |||
| > mste:MSTE_04816(184) | 167 | 65.9 | 706 | 4 | -> | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 167 | 65.3 | 702 | 5 | -> | RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 167 | 65.3 | 699 | 3 | -> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mabl:MMASJCM_4707(185) | 176 | 63.1 | 698 | 1 | -> | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 176 | 63.1 | 698 | 1 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > msal:DSM43276_04475(184) | 179 | 60.3 | 683 | 5 | -> | sigX; RNA polymerase sigma factor SigX | |||
| > nyu:D7D52_36470(?) | 175 | 62.3 | 679 | 0 | -- | - | |||
| > mrh:MycrhN_1984(183) | 179 | 58.7 | 666 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > nsr:NS506_06042(190) | 174 | 62.1 | 649 | 4 | -> | hypothetical protein | |||
| > mkn:MKAN_19960(157) | 159 | 65.4 | 648 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mrf:MJO55_27030(184) | 187 | 57.2 | 646 | 7 | -> | RNA polymerase sigma factor | |||
| > agra:AGRA3207_007836(197) | 185 | 58.9 | 642 | 30 | -> | RNA polymerase sigma factor | |||
| > amd:AMED_3760(193) | 191 | 56.5 | 641 | 21 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 191 | 56.5 | 641 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 191 | 56.5 | 641 | 21 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 191 | 56.5 | 641 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > kut:JJ691_47140(187) | 178 | 59.0 | 639 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > msa:Mycsm_06152(165) | 158 | 59.5 | 635 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mpsc:MPSYJ_10150(168) | 159 | 60.4 | 627 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmor:MMOR_08160(165) | 158 | 57.6 | 622 | 3 | -> | putative RNA polymerase sigma factor | |||
| > aprt:MUY14_29390(193) | 189 | 57.1 | 616 | 15 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > pfla:Pflav_031030(196) | 185 | 54.1 | 615 | 38 | -> | rpoE_13; RNA polymerase sigma24 factor | |||
| > amyc:CU254_17200(193) | 185 | 55.1 | 612 | 14 | -> | RNA polymerase subunit sigma | |||
| > fri:FraEuI1c_2645(203) | 188 | 52.7 | 601 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > ksl:OG809_22635(?) | 157 | 58.0 | 587 | 0 | -- | - | |||
| > abry:NYE86_06135(189) | 182 | 52.7 | 580 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > cai:Caci_2526(198) | 166 | 54.8 | 571 | 26 | <> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > fal:FRAAL4137(171) | 161 | 53.4 | 570 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > dmat:Dmats_24000(178) | 173 | 57.2 | 559 | 33 | -> | RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 157 | 59.2 | 549 | 43 | -> | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 158 | 41.1 | 370 | 42 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mmar:MODMU_4999(210) | 197 | 37.1 | 307 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sant:QR300_19755(?) | 188 | 34.6 | 306 | 0 | -- | - | |||
| > svl:Strvi_0700(268) | 188 | 34.6 | 306 | 29 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > src:M271_22495(268) | 188 | 34.6 | 304 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kau:B6264_13620(273) | 183 | 35.0 | 301 | 16 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kbb:ccbrp13_67120(?) | 165 | 32.1 | 301 | 0 | -- | - | |||
| > kit:CFP65_3152(280) | 183 | 35.0 | 301 | 18 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svr:CP971_18840(273) | 183 | 35.0 | 301 | 16 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ksk:KSE_33690(273) | 187 | 34.2 | 300 | 176 | -- | bldN; putative RNA polymerase ECF subfamily sigma factor | |||
| > ssyi:EKG83_44655(214) | 180 | 36.1 | 298 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sauo:BV401_25345(268) | 183 | 34.4 | 294 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbh:SBI_06006(270) | 183 | 34.4 | 294 | 43 | -- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actr:Asp14428_53360(307) | 203 | 35.5 | 293 | 76 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strh:GXP74_36695(244) | 184 | 35.3 | 293 | 20 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mcab:HXZ27_28245(322) | 203 | 34.0 | 292 | 237 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ccaz:COUCH_03770(309) | 203 | 35.5 | 291 | 74 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shar:HUT13_15615(280) | 183 | 34.4 | 291 | 70 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sti:Sthe_2346(181) | 156 | 39.7 | 291 | 12 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > strc:AA958_20175(268) | 188 | 34.6 | 291 | 29 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 180 | 34.4 | 291 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > afs:AFR_40205(313) | 201 | 34.3 | 290 | 86 | -- | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 200 | 34.5 | 289 | 0 | -- | - | |||
| > sbat:G4Z16_13190(290) | 188 | 34.6 | 289 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strf:ASR50_20275(233) | 195 | 33.8 | 289 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sxi:SXIM_29850(251) | 183 | 34.4 | 289 | 26 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor, TIGR02952 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ami:Amir_6736(217) | 189 | 34.9 | 288 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plab:C6361_11750(291) | 202 | 34.7 | 288 | 141 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 202 | 34.7 | 288 | 140 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |