GFIT result for
pfla
|
GFIT result for
pfla
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| pfla:Pflav_031030 (196 a.a.) |
-- |
rpoE_13; RNA polymerase sigma24 factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > amd:AMED_3760(193) | 191 | 64.4 | 741 | 21 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 191 | 64.4 | 741 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 191 | 64.4 | 741 | 21 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 191 | 64.4 | 741 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > fri:FraEuI1c_2645(203) | 175 | 65.1 | 712 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > amyc:CU254_17200(193) | 175 | 65.1 | 699 | 14 | -> | RNA polymerase subunit sigma | |||
| > aprt:MUY14_29390(193) | 175 | 64.6 | 694 | 15 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kut:JJ691_47140(187) | 169 | 65.7 | 690 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > fal:FRAAL4137(171) | 171 | 67.8 | 680 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > agra:AGRA3207_007836(197) | 186 | 57.0 | 659 | 30 | -> | RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 169 | 59.2 | 651 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 179 | 59.2 | 650 | 5 | -> | putative RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 169 | 59.8 | 649 | 4 | -> | putative RNA polymerase sigma factor | |||
| > msak:MSAS_45680(179) | 173 | 60.1 | 648 | 5 | -> | putative RNA polymerase sigma factor | |||
| > nah:F5544_08000(204) | 173 | 59.0 | 648 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 172 | 61.0 | 646 | 4 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mao:MAP4_4342(179) | 172 | 61.0 | 645 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 172 | 61.0 | 645 | 5 | -> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 172 | 61.0 | 645 | 5 | -> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 172 | 61.0 | 645 | 5 | -> | hypothetical protein | |||
| > cai:Caci_2526(198) | 170 | 64.1 | 644 | 26 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > ksl:OG809_22635(?) | 167 | 63.5 | 644 | 0 | -- | - | |||
| > mlw:MJO58_05095(180) | 173 | 59.0 | 644 | 5 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 178 | 55.1 | 642 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 169 | 58.6 | 642 | 3 | -> | RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 169 | 58.6 | 641 | 3 | -> | RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 182 | 57.1 | 640 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 169 | 59.2 | 639 | 2 | -> | RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 191 | 55.0 | 637 | 4 | -> | RNA polymerase subunit sigma | |||
| > mnv:MNVI_26030(179) | 170 | 58.8 | 635 | 3 | -> | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 175 | 58.9 | 633 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 169 | 58.0 | 633 | 5 | -> | RNA polymerase subunit sigma | |||
| > mcb:Mycch_1362(194) | 179 | 56.4 | 630 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > nyu:D7D52_36470(?) | 174 | 55.7 | 628 | 0 | -- | - | |||
| > mmuc:C1S78_017885(181) | 170 | 58.8 | 627 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 170 | 58.8 | 627 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 174 | 58.6 | 627 | 7 | -> | RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 175 | 57.7 | 627 | 5 | -> | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 181 | 56.4 | 627 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 172 | 57.0 | 626 | 4 | -> | RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 195 | 53.8 | 623 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 170 | 58.2 | 617 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mchi:AN480_22500(183) | 181 | 56.9 | 617 | 4 | -> | RNA polymerase subunit sigma | |||
| > mmat:MMAGJ_46560(188) | 185 | 54.1 | 615 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 164 | 61.6 | 611 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 182 | 55.5 | 610 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mmm:W7S_21510(183) | 181 | 56.4 | 609 | 3 | -> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 181 | 56.4 | 609 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mir:OCQ_44170(183) | 181 | 56.4 | 608 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mrh:MycrhN_1984(183) | 174 | 55.2 | 608 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mcoo:MCOO_42530(167) | 165 | 57.0 | 607 | 2 | -> | putative RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 182 | 56.0 | 606 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 169 | 53.8 | 605 | 6 | -> | RNA polymerase subunit sigma | |||
| > mpsc:MPSYJ_10150(168) | 163 | 58.3 | 601 | 5 | -> | putative RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 169 | 55.6 | 601 | 4 | -> | hypothetical protein | |||
| > abry:NYE86_06135(189) | 178 | 55.6 | 598 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 171 | 57.9 | 589 | 33 | -> | RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 176 | 51.7 | 586 | 3 | -> | RNA polymerase subunit sigma | |||
| > mmor:MMOR_08160(165) | 162 | 53.1 | 586 | 3 | -> | putative RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 167 | 58.1 | 581 | 43 | -> | RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 180 | 51.1 | 575 | 5 | -> | RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 171 | 53.8 | 573 | 3 | -> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msal:DSM43276_04475(184) | 173 | 52.0 | 571 | 5 | -> | sigX; RNA polymerase sigma factor SigX | |||
| > mste:MSTE_04816(184) | 176 | 50.6 | 569 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mabl:MMASJCM_4707(185) | 173 | 53.8 | 564 | 1 | -> | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 173 | 53.8 | 564 | 1 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > msa:Mycsm_06152(165) | 160 | 53.1 | 556 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mid:MIP_06466(153) | 152 | 58.6 | 542 | 2 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mia:OCU_42820(153) | 152 | 58.6 | 541 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 152 | 58.6 | 541 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mkn:MKAN_19960(157) | 142 | 52.8 | 484 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > kbs:EPA93_28450(202) | 157 | 40.8 | 361 | 42 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 159 | 35.8 | 325 | 0 | -- | - | |||
| > mmar:MODMU_4999(210) | 202 | 33.2 | 281 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sti:Sthe_2346(181) | 148 | 37.2 | 273 | 12 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > bbev:BBEV_3264(218) | 152 | 32.9 | 262 | 8 | -- | putative RNA polymerase sigma factor | |||
| > bfm:BP422_02605(180) | 152 | 33.6 | 260 | 28 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > atl:Athai_01830(281) | 206 | 33.0 | 259 | 39 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mpak:MIU77_04720(213) | 199 | 30.7 | 258 | 5 | -- | K03088 | rpoE | sigE; RNA polymerase sigma factor SigE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmet:G4Y79_09365(187) | 169 | 34.9 | 258 | 10 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > srt:Srot_2092(226) | 182 | 31.3 | 258 | 6 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > coh:EAV92_18100(187) | 150 | 30.0 | 256 | 7 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > kra:Krad_1151(232) | 211 | 31.3 | 256 | 29 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rsua:LQF12_04830(218) | 155 | 36.8 | 254 | 9 | -- | sigE; RNA polymerase sigma factor SigE | |||
| > tfla:O0235_08570(189) | 163 | 36.2 | 254 | 6 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > brw:GOP56_21610(181) | 157 | 30.6 | 253 | 18 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ica:Intca_0653(255) | 204 | 32.4 | 252 | 17 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > tbh:Tbon_05915(189) | 163 | 35.0 | 252 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > thug:KNN16_11270(184) | 147 | 34.7 | 251 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > bse:Bsel_0096(184) | 153 | 32.7 | 250 | 7 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > plab:C6361_11750(291) | 199 | 32.2 | 246 | 141 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 199 | 32.2 | 246 | 140 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > teh:GKE56_11075(205) | 200 | 33.0 | 246 | 10 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > blr:BRLA_c011480(181) | 157 | 29.9 | 245 | 19 | -- | K03088 | rpoE | sigX_3; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bsd:BLASA_0972(196) | 179 | 35.8 | 245 | 11 | -- | K03088 | rpoE | RNA polymerase, sigma subunit, ECF family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jtl:M6D93_15445(191) | 162 | 36.4 | 245 | 18 | -- | sigE; RNA polymerase sigma factor SigE | |||
| > fra:Francci3_3833(294) | 201 | 30.8 | 244 | 21 | -- | K03088 | rpoE | RNA polymerase, sigma 29 subunit, SigE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gyu:FE374_04980(214) | 190 | 33.7 | 244 | 16 | -- | sigE; RNA polymerase sigma factor SigE | |||
| > mkr:MKOR_00820(208) | 193 | 30.6 | 244 | 6 | -- | K03088 | rpoE | sigE; ECF RNA polymerase sigma factor SigE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ami:Amir_6736(217) | 191 | 29.8 | 243 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |