GFIT result for
agra
|
GFIT result for
agra
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| agra:AGRA3207_007836 (197 a.a.) |
-- |
RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > amyc:CU254_17200(193) | 185 | 68.1 | 770 | 14 | <> | RNA polymerase subunit sigma | |||
| > amd:AMED_3760(193) | 184 | 66.3 | 751 | 21 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 184 | 66.3 | 751 | 22 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 184 | 66.3 | 751 | 21 | <> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 184 | 66.3 | 751 | 22 | <> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > aprt:MUY14_29390(193) | 186 | 66.7 | 742 | 15 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > kut:JJ691_47140(187) | 181 | 63.0 | 736 | 14 | <- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > ksl:OG809_22635(?) | 159 | 66.0 | 690 | 0 | -- | - | |||
| > mfj:MFLOJ_25060(180) | 180 | 63.9 | 677 | 5 | <- | putative RNA polymerase sigma factor | |||
| > fal:FRAAL4137(171) | 165 | 63.0 | 673 | 5 | <- | putative ECF sub-family Sigma-70 factor | |||
| > mlw:MJO58_05095(180) | 180 | 62.8 | 667 | 5 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > fri:FraEuI1c_2645(203) | 188 | 59.6 | 664 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mnv:MNVI_26030(179) | 185 | 60.5 | 664 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 189 | 58.7 | 661 | 4 | <- | RNA polymerase subunit sigma | |||
| > mpaa:MKK62_19730(179) | 179 | 62.0 | 660 | 4 | <- | RNA polymerase sigma factor | |||
| > pfla:Pflav_031030(196) | 186 | 57.0 | 659 | 38 | <- | rpoE_13; RNA polymerase sigma24 factor | |||
| > mab:MAB_4652(185) | 181 | 60.8 | 658 | 3 | <- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msak:MSAS_45680(179) | 179 | 62.6 | 658 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 173 | 61.8 | 655 | 3 | <- | RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 176 | 61.4 | 654 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mabb:MASS_4680(184) | 181 | 59.1 | 653 | 2 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mabl:MMASJCM_4707(185) | 181 | 59.1 | 653 | 1 | <- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 181 | 59.1 | 653 | 1 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > nah:F5544_08000(204) | 171 | 59.1 | 651 | 8 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 173 | 61.3 | 650 | 3 | <- | RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 179 | 59.8 | 645 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 172 | 59.9 | 645 | 4 | <- | putative RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 192 | 57.8 | 645 | 4 | <- | putative RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 181 | 55.8 | 644 | 3 | <- | RNA polymerase subunit sigma | |||
| > mbrd:MBRA_05770(179) | 187 | 59.4 | 643 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 179 | 62.0 | 642 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 179 | 62.0 | 642 | 5 | <- | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 179 | 62.0 | 642 | 5 | <- | RNA polymerase sigma factor | |||
| > mmat:MMAGJ_46560(188) | 185 | 58.9 | 642 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 179 | 62.0 | 642 | 5 | <- | hypothetical protein | |||
| > mav:MAV_4415(179) | 179 | 62.0 | 641 | 4 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mste:MSTE_04816(184) | 183 | 56.8 | 641 | 4 | <- | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 184 | 62.0 | 641 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 167 | 62.3 | 640 | 2 | <- | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 186 | 58.1 | 638 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 176 | 59.1 | 638 | 2 | <- | RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 183 | 57.9 | 635 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 179 | 59.8 | 635 | 4 | <- | putative RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 188 | 53.2 | 635 | 0 | -- | - | |||
| > mmuc:C1S78_017885(181) | 183 | 57.9 | 634 | 4 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > abry:NYE86_06135(189) | 172 | 57.0 | 632 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 179 | 61.5 | 632 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 181 | 56.4 | 631 | 5 | <- | RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 181 | 56.9 | 629 | 5 | <- | sigX; RNA polymerase sigma factor SigX | |||
| > mrh:MycrhN_1984(183) | 178 | 58.4 | 628 | 3 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > cai:Caci_2526(198) | 179 | 58.7 | 627 | 26 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mll:B1R94_04110(180) | 169 | 60.4 | 626 | 5 | <- | RNA polymerase subunit sigma | |||
| > mpsc:MPSYJ_10150(168) | 165 | 61.8 | 622 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 182 | 59.9 | 620 | 4 | <- | RNA polymerase subunit sigma | |||
| > nsr:NS506_06042(190) | 182 | 54.9 | 620 | 4 | <- | hypothetical protein | |||
| > mrf:MJO55_27030(184) | 178 | 57.9 | 619 | 7 | <- | RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 175 | 58.3 | 617 | 2 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mmm:W7S_21510(183) | 182 | 59.9 | 617 | 3 | <- | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 182 | 59.9 | 617 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mir:OCQ_44170(183) | 182 | 59.9 | 616 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mdx:BTO20_26575(178) | 170 | 58.8 | 611 | 6 | <- | RNA polymerase subunit sigma | |||
| > mmag:MMAD_32210(172) | 155 | 65.8 | 608 | 5 | <- | putative RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 173 | 54.9 | 599 | 33 | <- | RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 175 | 60.0 | 593 | 3 | <- | putative RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 166 | 55.4 | 589 | 43 | <> | RNA polymerase sigma factor | |||
| > mmor:MMOR_08160(165) | 155 | 56.8 | 582 | 3 | <- | putative RNA polymerase sigma factor | |||
| > msa:Mycsm_06152(165) | 162 | 57.4 | 580 | 5 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mia:OCU_42820(153) | 151 | 64.2 | 568 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 151 | 64.2 | 568 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 151 | 63.6 | 564 | 2 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mkn:MKAN_19960(157) | 149 | 59.7 | 530 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > kbs:EPA93_28450(202) | 189 | 38.6 | 403 | 42 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 163 | 35.0 | 324 | 0 | -- | - | |||
| > ami:Amir_6736(217) | 192 | 35.4 | 308 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 180 | 37.8 | 307 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 192 | 34.9 | 305 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rant:RHODO2019_01705(?) | 200 | 37.0 | 299 | 0 | -- | - | |||
| > aer:AERYTH_03095(216) | 196 | 38.3 | 295 | 6 | -- | RNA polymerase sigma70 factor | |||
| > kal:KALB_8357(199) | 194 | 35.1 | 295 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aef:GEV26_15875(232) | 190 | 37.9 | 290 | 6 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mmar:MODMU_4999(210) | 199 | 35.2 | 289 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > thug:KNN16_11270(184) | 167 | 39.5 | 289 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > srim:CP984_21350(260) | 197 | 34.5 | 288 | 23 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kphy:AOZ06_50515(208) | 198 | 34.3 | 287 | 43 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stub:MMF93_18845(279) | 200 | 33.5 | 287 | 23 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cati:CS0771_08550(308) | 171 | 38.6 | 286 | 49 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ica:Intca_0653(255) | 180 | 34.4 | 286 | 17 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > sgrg:L0C25_07670(?) | 187 | 35.3 | 286 | 0 | -- | - | |||
| > srk:FGW37_14890(277) | 209 | 33.5 | 286 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sxi:SXIM_29850(251) | 198 | 34.8 | 286 | 26 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor, TIGR02952 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 200 | 34.5 | 285 | 0 | -- | - | |||
| > src:M271_22495(268) | 196 | 33.7 | 285 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > yia:LO772_19945(261) | 198 | 33.3 | 285 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sant:QR300_19755(?) | 196 | 33.7 | 284 | 0 | -- | - | |||
| > shar:HUT13_15615(280) | 191 | 34.6 | 284 | 70 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aser:Asera_05600(281) | 209 | 35.9 | 283 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 203 | 34.0 | 283 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > agla:OIE69_18520(?) | 191 | 35.1 | 282 | 0 | -- | - | |||
| > smao:CAG99_11270(260) | 201 | 34.3 | 282 | 32 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stp:Strop_0350(311) | 197 | 34.5 | 282 | 58 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |