GFIT result for
msak
|
GFIT result for
msak
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| msak:MSAS_45680 (179 a.a.) |
-- |
putative RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mao:MAP4_4342(179) | 179 | 89.4 | 1060 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 179 | 89.4 | 1060 | 5 | <> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 179 | 89.4 | 1060 | 5 | <> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 179 | 89.4 | 1060 | 5 | <> | hypothetical protein | |||
| > mav:MAV_4415(179) | 179 | 89.4 | 1054 | 4 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mseo:MSEO_49050(182) | 183 | 89.1 | 1044 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 179 | 89.4 | 1035 | 5 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 179 | 89.4 | 1034 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 181 | 87.8 | 1019 | 4 | <> | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 183 | 87.4 | 1017 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 182 | 86.3 | 1008 | 4 | <> | RNA polymerase subunit sigma | |||
| > mmm:W7S_21510(183) | 182 | 86.3 | 1005 | 3 | <> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 182 | 86.3 | 1005 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mir:OCQ_44170(183) | 182 | 86.3 | 1004 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mbrd:MBRA_05770(179) | 179 | 85.5 | 999 | 4 | -> | putative RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 185 | 84.9 | 996 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 175 | 86.3 | 990 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 177 | 84.7 | 988 | 4 | -> | RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 182 | 83.5 | 978 | 3 | <> | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 172 | 84.3 | 968 | 4 | -> | RNA polymerase subunit sigma | |||
| > mcoo:MCOO_42530(167) | 163 | 85.3 | 904 | 2 | -> | putative RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 181 | 77.3 | 904 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 181 | 77.3 | 902 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 182 | 76.9 | 874 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mia:OCU_42820(153) | 152 | 88.8 | 851 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 152 | 88.8 | 851 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > maub:MAUB_11840(185) | 185 | 73.5 | 850 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mid:MIP_06466(153) | 152 | 88.8 | 849 | 2 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mkn:MKAN_19960(157) | 150 | 84.7 | 844 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mmat:MMAGJ_46560(188) | 186 | 69.4 | 830 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 163 | 79.8 | 824 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 182 | 70.3 | 821 | 6 | -> | RNA polymerase subunit sigma | |||
| > msal:DSM43276_04475(184) | 176 | 72.7 | 819 | 5 | -> | sigX; RNA polymerase sigma factor SigX | |||
| > maic:MAIC_48540(179) | 180 | 71.1 | 811 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 180 | 70.0 | 808 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 180 | 70.6 | 805 | 2 | -> | RNA polymerase sigma factor | |||
| > mabl:MMASJCM_4707(185) | 181 | 70.7 | 803 | 1 | -> | RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 180 | 70.0 | 803 | 3 | -> | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 181 | 70.7 | 803 | 1 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mcb:Mycch_1362(194) | 178 | 71.3 | 801 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > miz:BAB75_26190(184) | 176 | 72.2 | 801 | 3 | -> | RNA polymerase subunit sigma | |||
| > mpae:K0O64_03790(179) | 180 | 70.0 | 800 | 3 | -> | RNA polymerase sigma factor | |||
| > mste:MSTE_04816(184) | 176 | 71.0 | 796 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 180 | 67.8 | 792 | 5 | -> | RNA polymerase subunit sigma | |||
| > msao:MYCSP_21660(184) | 180 | 68.3 | 786 | 5 | -> | RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 181 | 69.1 | 779 | 3 | -> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > many:MANY_47430(178) | 170 | 69.4 | 778 | 5 | -> | putative RNA polymerase sigma factor | |||
| > nah:F5544_08000(204) | 173 | 63.6 | 729 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 168 | 64.3 | 703 | 0 | -- | - | |||
| > mrf:MJO55_27030(184) | 176 | 61.4 | 691 | 7 | -> | RNA polymerase sigma factor | |||
| > amd:AMED_3760(193) | 182 | 63.2 | 684 | 21 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 182 | 63.2 | 684 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 182 | 63.2 | 684 | 21 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 182 | 63.2 | 684 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mrh:MycrhN_1984(183) | 171 | 58.5 | 683 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mpsc:MPSYJ_10150(168) | 162 | 61.7 | 666 | 5 | -> | putative RNA polymerase sigma factor | |||
| > amyc:CU254_17200(193) | 180 | 62.8 | 665 | 14 | -> | RNA polymerase subunit sigma | |||
| > nsr:NS506_06042(190) | 168 | 63.1 | 664 | 4 | -> | hypothetical protein | |||
| > agra:AGRA3207_007836(197) | 179 | 62.6 | 658 | 30 | -> | RNA polymerase sigma factor | |||
| > aprt:MUY14_29390(193) | 180 | 61.7 | 657 | 15 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kut:JJ691_47140(187) | 170 | 60.0 | 650 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > pfla:Pflav_031030(196) | 173 | 60.1 | 648 | 38 | -> | rpoE_13; RNA polymerase sigma24 factor | |||
| > ksl:OG809_22635(?) | 160 | 64.4 | 645 | 0 | -- | - | |||
| > msa:Mycsm_06152(165) | 153 | 60.8 | 644 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mmor:MMOR_08160(165) | 156 | 58.3 | 633 | 3 | -> | putative RNA polymerase sigma factor | |||
| > fri:FraEuI1c_2645(203) | 167 | 59.3 | 624 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > cai:Caci_2526(198) | 183 | 55.7 | 623 | 26 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > fal:FRAAL4137(171) | 170 | 60.0 | 619 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > abry:NYE86_06175(201) | 165 | 58.2 | 598 | 12 | -- | RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 172 | 55.2 | 568 | 33 | -> | RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 163 | 56.4 | 557 | 43 | -> | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 165 | 40.6 | 364 | 42 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 159 | 32.1 | 310 | 0 | -- | - | |||
| > ssyi:EKG83_44655(214) | 168 | 33.3 | 278 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mdr:MDOR_06240(174) | 170 | 34.7 | 274 | 2 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgrg:L0C25_07670(?) | 182 | 34.1 | 273 | 0 | -- | - | |||
| > thug:KNN16_11270(184) | 162 | 38.9 | 272 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > amyy:YIM_17750(170) | 161 | 36.6 | 265 | 62 | -- | K03088 | rpoE | sigL2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sesp:BN6_80910(214) | 179 | 32.4 | 265 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mmar:MODMU_4999(210) | 194 | 35.1 | 261 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ami:Amir_6736(217) | 176 | 34.1 | 258 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aab:A4R43_04640(161) | 148 | 37.8 | 257 | 48 | -- | K03088 | rpoE | RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 176 | 33.5 | 256 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 154 | 34.4 | 255 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sauo:BV401_25345(268) | 160 | 35.0 | 254 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smal:SMALA_4300(178) | 160 | 35.0 | 254 | 18 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > coh:EAV92_18100(187) | 154 | 31.2 | 253 | 7 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > rant:RHODO2019_01705(?) | 155 | 34.8 | 253 | 0 | -- | - | |||
| > mvq:MYVA_1098(174) | 185 | 33.5 | 252 | 4 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbh:SBI_06006(270) | 154 | 34.4 | 251 | 43 | -- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stry:EQG64_14440(258) | 159 | 35.8 | 251 | 9 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aez:C3E78_15795(241) | 185 | 33.0 | 250 | 6 | -- | RNA polymerase subunit sigma-70 | |||
| > ppel:H6H00_02580(171) | 170 | 35.9 | 250 | 18 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sant:QR300_19755(?) | 160 | 34.4 | 250 | 0 | -- | - | |||
| > src:M271_22495(268) | 160 | 34.4 | 250 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salj:SMD11_3706(268) | 160 | 34.4 | 249 | 25 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sall:SAZ_20975(262) | 160 | 34.4 | 249 | 22 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salu:DC74_3969(262) | 160 | 34.4 | 249 | 20 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shau:K9S39_24435(?) | 160 | 34.4 | 249 | 0 | -- | - | |||
| > smob:J7W19_14715(270) | 160 | 34.4 | 249 | 29 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |