GFIT result for
msal
|
GFIT result for
msal
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| msal:DSM43276_04475 (184 a.a.) |
-- |
sigX; RNA polymerase sigma factor SigX | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mste:MSTE_04816(184) | 184 | 94.6 | 1125 | 4 | <> | putative RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 184 | 91.3 | 1089 | 3 | <> | RNA polymerase subunit sigma | |||
| > mabb:MASS_4680(184) | 184 | 89.1 | 1071 | 2 | <> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mabl:MMASJCM_4707(185) | 184 | 89.1 | 1071 | 1 | <> | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 184 | 89.1 | 1071 | 1 | <> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > msao:MYCSP_21660(184) | 183 | 87.4 | 1063 | 5 | <> | RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 184 | 86.4 | 1047 | 3 | <> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mphu:MPHO_00980(181) | 179 | 76.5 | 852 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 179 | 76.5 | 850 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 177 | 74.0 | 826 | 4 | -> | RNA polymerase sigma factor | |||
| > msak:MSAS_45680(179) | 176 | 72.7 | 819 | 5 | -> | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 180 | 73.3 | 817 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 182 | 70.9 | 813 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 179 | 71.5 | 802 | 5 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 180 | 70.0 | 801 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 181 | 70.2 | 799 | 4 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mao:MAP4_4342(179) | 176 | 71.0 | 797 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 176 | 71.0 | 797 | 5 | -> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 176 | 71.0 | 797 | 5 | -> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 176 | 71.0 | 797 | 5 | -> | hypothetical protein | |||
| > mcoo:MCOO_42530(167) | 173 | 71.7 | 796 | 2 | -> | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 177 | 72.9 | 795 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 177 | 70.6 | 794 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 183 | 68.9 | 785 | 4 | -> | RNA polymerase subunit sigma | |||
| > mbrd:MBRA_05770(179) | 177 | 70.1 | 784 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mmm:W7S_21510(183) | 183 | 68.9 | 782 | 3 | -> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 183 | 68.9 | 782 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mfj:MFLOJ_25060(180) | 178 | 69.7 | 781 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mir:OCQ_44170(183) | 183 | 68.9 | 781 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mman:MMAN_31190(183) | 173 | 71.1 | 781 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 175 | 69.7 | 781 | 4 | -> | RNA polymerase subunit sigma | |||
| > msim:MSIM_15410(187) | 178 | 67.4 | 770 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 182 | 63.2 | 736 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mmag:MMAD_32210(172) | 166 | 69.9 | 733 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 179 | 64.2 | 725 | 4 | -> | putative RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 181 | 63.0 | 714 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 179 | 63.1 | 714 | 3 | -> | RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 179 | 62.6 | 712 | 2 | -> | RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 159 | 67.9 | 706 | 5 | -> | RNA polymerase subunit sigma | |||
| > mpae:K0O64_03790(179) | 179 | 61.5 | 698 | 3 | -> | RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 178 | 64.0 | 697 | 6 | -> | RNA polymerase subunit sigma | |||
| > mrh:MycrhN_1984(183) | 172 | 61.6 | 697 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > many:MANY_47430(178) | 178 | 60.1 | 692 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 153 | 71.9 | 688 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 153 | 71.9 | 688 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mpsc:MPSYJ_10150(168) | 165 | 61.2 | 687 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mid:MIP_06466(153) | 153 | 71.2 | 684 | 2 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmat:MMAGJ_46560(188) | 179 | 60.3 | 683 | 6 | -> | putative RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 172 | 63.4 | 683 | 0 | -- | - | |||
| > nah:F5544_08000(204) | 176 | 59.7 | 676 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 177 | 60.5 | 675 | 7 | -> | RNA polymerase sigma factor | |||
| > mkn:MKAN_19960(157) | 153 | 68.0 | 654 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amd:AMED_3760(193) | 175 | 60.0 | 643 | 21 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 175 | 60.0 | 643 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 175 | 60.0 | 643 | 21 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 175 | 60.0 | 643 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > nsr:NS506_06042(190) | 172 | 62.2 | 642 | 4 | -> | hypothetical protein | |||
| > msa:Mycsm_06152(165) | 160 | 60.6 | 640 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mmor:MMOR_08160(165) | 163 | 58.3 | 632 | 3 | -> | putative RNA polymerase sigma factor | |||
| > agra:AGRA3207_007836(197) | 181 | 56.9 | 629 | 30 | -> | RNA polymerase sigma factor | |||
| > kut:JJ691_47140(187) | 182 | 55.5 | 627 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amyc:CU254_17200(193) | 175 | 58.3 | 625 | 14 | -> | RNA polymerase subunit sigma | |||
| > ksl:OG809_22635(?) | 163 | 58.9 | 608 | 0 | -- | - | |||
| > aprt:MUY14_29390(193) | 175 | 56.0 | 599 | 15 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > fal:FRAAL4137(171) | 170 | 52.9 | 576 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > pfla:Pflav_031030(196) | 173 | 52.0 | 571 | 38 | -> | rpoE_13; RNA polymerase sigma24 factor | |||
| > fri:FraEuI1c_2645(203) | 182 | 52.2 | 563 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > dmat:Dmats_24000(178) | 179 | 52.0 | 540 | 33 | -> | RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 163 | 54.6 | 539 | 43 | -> | RNA polymerase sigma factor | |||
| > abry:NYE86_06175(201) | 160 | 52.5 | 527 | 12 | -- | RNA polymerase sigma factor | |||
| > cai:Caci_2526(198) | 162 | 52.5 | 526 | 26 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > kbs:EPA93_28450(202) | 172 | 38.4 | 371 | 42 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 167 | 35.9 | 367 | 0 | -- | - | |||
| > ami:Amir_6736(217) | 174 | 35.1 | 291 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 174 | 33.9 | 287 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 172 | 36.0 | 285 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgrg:L0C25_07670(?) | 180 | 35.0 | 275 | 0 | -- | - | |||
| > aeb:C6I20_00785(234) | 188 | 33.0 | 274 | 3 | -- | RNA polymerase subunit sigma-70 | |||
| > sesp:BN6_80910(214) | 172 | 34.9 | 272 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > thug:KNN16_11270(184) | 181 | 35.9 | 272 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mmar:MODMU_4999(210) | 173 | 35.3 | 271 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actu:Actkin_06078(213) | 183 | 31.7 | 270 | 31 | -- | K03088 | rpoE | sigM_2; RNA polymerase sigma factor SigM; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aef:GEV26_15875(232) | 177 | 35.0 | 268 | 6 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > scoe:CP976_24770(256) | 178 | 36.5 | 268 | 30 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shaw:CEB94_23325(256) | 178 | 36.5 | 268 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 186 | 33.3 | 268 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stsi:A4E84_23055(256) | 178 | 36.5 | 268 | 25 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stui:GCM10017668_39780(256) | 178 | 36.5 | 268 | 20 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alo:CRK60207(203) | 170 | 31.8 | 267 | 33 | -- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slau:SLA_3247(270) | 178 | 36.5 | 267 | 36 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spra:CP972_20380(276) | 180 | 37.2 | 267 | 48 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sseo:D0Z67_16470(261) | 179 | 37.4 | 267 | 15 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aez:C3E78_15795(241) | 181 | 33.1 | 266 | 6 | -- | RNA polymerase subunit sigma-70 | |||
| > salf:SMD44_04936(257) | 178 | 36.5 | 266 | 31 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > saov:G3H79_15715(257) | 178 | 36.5 | 266 | 27 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > saqu:EJC51_27730(257) | 178 | 36.5 | 266 | 34 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfp:QUY26_16575(?) | 178 | 36.5 | 266 | 0 | -- | - | |||
| > sgal:CP966_20830(256) | 179 | 37.4 | 266 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sjn:RI060_17780(?) | 178 | 36.5 | 266 | 0 | -- | - | |||
| > skg:KJK29_15545(?) | 178 | 36.5 | 266 | 0 | -- | - | |||