GFIT result for
mkn
|
GFIT result for
mkn
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mkn:MKAN_19960 (157 a.a.) |
-- |
ECF subfamily RNA polymerase sigma-24 factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > msak:MSAS_45680(179) | 150 | 84.7 | 844 | 5 | -- | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 151 | 86.8 | 835 | 5 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 150 | 83.3 | 818 | 4 | -- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mnv:MNVI_26030(179) | 150 | 82.7 | 818 | 3 | -- | putative RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 150 | 83.3 | 817 | 5 | -- | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 150 | 83.3 | 817 | 5 | -- | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 150 | 83.3 | 817 | 5 | -- | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 150 | 83.3 | 817 | 5 | -- | hypothetical protein | |||
| > mfj:MFLOJ_25060(180) | 151 | 83.4 | 809 | 5 | -- | putative RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 154 | 83.1 | 805 | 5 | -- | putative RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 154 | 81.2 | 799 | 4 | -- | RNA polymerase subunit sigma | |||
| > mpag:C0J29_05965(189) | 145 | 82.8 | 799 | 4 | -- | RNA polymerase subunit sigma | |||
| > mmm:W7S_21510(183) | 154 | 81.2 | 796 | 3 | -- | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 154 | 81.2 | 796 | 3 | -- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mir:OCQ_44170(183) | 154 | 81.2 | 795 | 3 | -- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msto:MSTO_28290(183) | 154 | 82.5 | 791 | 5 | -- | putative RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 148 | 81.8 | 787 | 4 | -- | putative RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 147 | 82.3 | 779 | 4 | -- | putative RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 154 | 79.2 | 773 | 3 | -- | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 150 | 78.7 | 772 | 4 | -- | RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 153 | 79.1 | 769 | 4 | -- | putative RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 138 | 77.5 | 701 | 2 | -- | putative RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 152 | 72.4 | 701 | 5 | -- | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 152 | 72.4 | 699 | 4 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 121 | 87.6 | 675 | 3 | -- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 121 | 87.6 | 675 | 3 | -- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mabb:MASS_1p0095(181) | 153 | 71.2 | 674 | 3 | -- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 121 | 86.8 | 671 | 2 | -- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > maub:MAUB_11840(185) | 156 | 69.2 | 662 | 6 | -- | putative RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 153 | 68.0 | 654 | 5 | -- | sigX; RNA polymerase sigma factor SigX | |||
| > maic:MAIC_48540(179) | 151 | 68.2 | 649 | 4 | -- | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 135 | 76.3 | 648 | 5 | -- | putative RNA polymerase sigma factor | |||
| > mmat:MMAGJ_46560(188) | 159 | 65.4 | 648 | 6 | -- | putative RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 143 | 69.2 | 645 | 3 | -- | RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 143 | 68.5 | 643 | 3 | -- | RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 143 | 69.2 | 641 | 4 | -- | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 148 | 68.9 | 636 | 2 | -- | RNA polymerase sigma factor, sigma-70 family | |||
| > miz:BAB75_26190(184) | 153 | 66.7 | 634 | 3 | -- | RNA polymerase subunit sigma | |||
| > mye:AB431_03980(179) | 143 | 67.8 | 634 | 2 | -- | RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 153 | 66.0 | 633 | 6 | -- | RNA polymerase subunit sigma | |||
| > mabl:MMASJCM_4707(185) | 156 | 64.7 | 629 | 1 | -- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 156 | 64.7 | 629 | 1 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mll:B1R94_04110(180) | 151 | 63.6 | 628 | 5 | -- | RNA polymerase subunit sigma | |||
| > mste:MSTE_04816(184) | 153 | 65.4 | 628 | 4 | -- | putative RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 141 | 66.7 | 621 | 5 | -- | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 153 | 64.1 | 620 | 5 | -- | RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 156 | 63.5 | 615 | 3 | -- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nah:F5544_08000(204) | 146 | 62.3 | 597 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 150 | 62.0 | 572 | 0 | -- | - | |||
| > nsr:NS506_06042(190) | 139 | 64.0 | 553 | 4 | -- | hypothetical protein | |||
| > mrh:MycrhN_1984(183) | 146 | 54.8 | 552 | 3 | -- | RNA polymerase sigma factor, sigma-70 family | |||
| > mrf:MJO55_27030(184) | 145 | 57.9 | 535 | 7 | -- | RNA polymerase sigma factor | |||
| > mmor:MMOR_08160(165) | 132 | 58.3 | 531 | 3 | -- | putative RNA polymerase sigma factor | |||
| > agra:AGRA3207_007836(197) | 149 | 59.7 | 530 | 30 | -- | RNA polymerase sigma factor | |||
| > mpsc:MPSYJ_10150(168) | 135 | 57.0 | 522 | 5 | -- | putative RNA polymerase sigma factor | |||
| > msa:Mycsm_06152(165) | 131 | 57.3 | 513 | 5 | -- | RNA polymerase sigma factor, sigma-70 family | |||
| > amd:AMED_3760(193) | 144 | 59.0 | 510 | 21 | -- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 144 | 59.0 | 510 | 22 | -- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 144 | 59.0 | 510 | 21 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 144 | 59.0 | 510 | 22 | -- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > aprt:MUY14_29390(193) | 143 | 59.4 | 505 | 15 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > kut:JJ691_47140(187) | 151 | 54.3 | 505 | 14 | -- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amyc:CU254_17200(193) | 145 | 58.6 | 501 | 14 | -- | RNA polymerase subunit sigma | |||
| > ksl:OG809_22635(?) | 135 | 58.5 | 493 | 0 | -- | - | |||
| > pfla:Pflav_031030(196) | 142 | 52.8 | 484 | 38 | -- | rpoE_13; RNA polymerase sigma24 factor | |||
| > fri:FraEuI1c_2645(203) | 140 | 53.6 | 473 | 14 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > fal:FRAAL4137(171) | 139 | 55.4 | 469 | 5 | -- | putative ECF sub-family Sigma-70 factor | |||
| > cai:Caci_2526(198) | 157 | 48.4 | 463 | 26 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > abry:NYE86_06175(201) | 148 | 49.3 | 456 | 12 | -- | RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 151 | 51.7 | 434 | 33 | -- | RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 136 | 52.2 | 421 | 43 | -- | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 142 | 37.3 | 282 | 42 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 134 | 30.6 | 240 | 0 | -- | - | |||
| > acht:bsdcttw_13770(182) | 133 | 31.6 | 222 | 4 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 159 | 31.4 | 219 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mdr:MDOR_06240(174) | 141 | 33.3 | 216 | 2 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jlv:G3257_14580(172) | 131 | 32.1 | 213 | 18 | -- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > mxe:MYXE_39220(61) | 59 | 57.6 | 211 | 0 | -> | hypothetical protein | |||
| > ppel:H6H00_02580(171) | 135 | 37.8 | 211 | 18 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > blr:BRLA_c011480(181) | 130 | 31.5 | 209 | 19 | -- | K03088 | rpoE | sigX_3; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cth:Cthe_1809(179) | 149 | 27.5 | 208 | 4 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ctx:Clo1313_2483(179) | 149 | 27.5 | 208 | 4 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > jah:JAB4_028780(178) | 149 | 28.9 | 207 | 14 | -- | K23514 | fecI | fecI_4; putative RNA polymerase sigma factor FecI; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > thug:KNN16_11270(184) | 127 | 36.2 | 206 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > sgrg:L0C25_07670(?) | 124 | 32.3 | 205 | 0 | -- | - | |||
| > jaz:YQ44_13745(169) | 104 | 39.4 | 204 | 19 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > mflv:NCTC10271_04125(176) | 144 | 31.2 | 203 | 7 | -- | K03088 | rpoE | sigM_2; sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msp:Mspyr1_44820(184) | 141 | 31.2 | 201 | 8 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mvq:MYVA_1098(174) | 154 | 31.8 | 200 | 4 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > brw:GOP56_21610(181) | 130 | 30.0 | 199 | 18 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 124 | 34.7 | 199 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gtn:GTNG_1263(173) | 142 | 27.5 | 198 | 2 | -- | Putative RNA polymerase sigma factor | |||
| > mcee:MCEL_23220(176) | 156 | 29.5 | 198 | 6 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mgi:Mflv_5063(184) | 141 | 31.2 | 198 | 8 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mthn:4412656_00899(174) | 119 | 32.8 | 198 | 3 | -- | K03088 | rpoE | sigM; sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msb:LJ00_07070(174) | 119 | 31.9 | 197 | 9 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msg:MSMEI_1383(174) | 119 | 31.9 | 197 | 9 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msh:LI98_07070(174) | 119 | 31.9 | 197 | 9 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msm:MSMEG_1418(174) | 119 | 31.9 | 197 | 9 | -- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msn:LI99_07070(174) | 119 | 31.9 | 197 | 9 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |