GFIT result for
mchi
|
GFIT result for
mchi
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mchi:AN480_22500 (183 a.a.) |
-- |
RNA polymerase subunit sigma | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mir:OCQ_44170(183) | 183 | 99.5 | 1172 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 183 | 98.9 | 1166 | 3 | <> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 183 | 98.9 | 1166 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mman:MMAN_31190(183) | 182 | 87.4 | 1032 | 3 | <> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 182 | 86.3 | 1008 | 4 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msak:MSAS_45680(179) | 182 | 86.3 | 1008 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 182 | 85.7 | 1002 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 182 | 85.2 | 997 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 182 | 85.2 | 997 | 5 | <> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 182 | 85.2 | 997 | 5 | <> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 182 | 85.2 | 997 | 5 | <> | hypothetical protein | |||
| > msim:MSIM_15410(187) | 176 | 84.1 | 962 | 4 | <> | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 183 | 83.1 | 956 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 183 | 82.5 | 952 | 5 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 182 | 81.9 | 948 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mia:OCU_42820(153) | 153 | 98.7 | 947 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 153 | 98.7 | 947 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 153 | 98.0 | 943 | 2 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mfj:MFLOJ_25060(180) | 183 | 82.5 | 940 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 179 | 80.4 | 917 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 182 | 77.5 | 900 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 177 | 78.5 | 896 | 4 | <- | RNA polymerase subunit sigma | |||
| > mpaa:MKK62_19730(179) | 181 | 77.9 | 893 | 4 | <- | RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 167 | 78.4 | 836 | 2 | <- | putative RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 183 | 72.1 | 833 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 183 | 72.1 | 831 | 4 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mmat:MMAGJ_46560(188) | 188 | 67.0 | 814 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 184 | 71.2 | 802 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmag:MMAD_32210(172) | 162 | 80.2 | 801 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mkn:MKAN_19960(157) | 154 | 81.2 | 799 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > msal:DSM43276_04475(184) | 183 | 68.9 | 785 | 5 | <- | sigX; RNA polymerase sigma factor SigX | |||
| > mcro:MI149_04390(179) | 181 | 70.2 | 784 | 3 | <- | RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 187 | 68.4 | 781 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 181 | 69.6 | 779 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 184 | 68.5 | 778 | 6 | <- | RNA polymerase subunit sigma | |||
| > miz:BAB75_26190(184) | 184 | 69.6 | 778 | 3 | <- | RNA polymerase subunit sigma | |||
| > mabl:MMASJCM_4707(185) | 183 | 68.3 | 777 | 1 | <- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 183 | 68.3 | 777 | 1 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > maic:MAIC_48540(179) | 181 | 69.6 | 772 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 181 | 69.1 | 772 | 3 | <- | RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 181 | 69.1 | 772 | 2 | <- | RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 181 | 66.9 | 770 | 5 | <- | RNA polymerase subunit sigma | |||
| > mste:MSTE_04816(184) | 183 | 67.8 | 769 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 183 | 68.3 | 760 | 2 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mab:MAB_4652(185) | 183 | 66.7 | 752 | 3 | <- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msao:MYCSP_21660(184) | 184 | 65.8 | 744 | 5 | <- | RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 174 | 66.1 | 738 | 5 | <- | putative RNA polymerase sigma factor | |||
| > nah:F5544_08000(204) | 181 | 61.9 | 708 | 8 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 178 | 60.1 | 673 | 7 | <- | RNA polymerase sigma factor | |||
| > mrh:MycrhN_1984(183) | 175 | 57.7 | 665 | 3 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > nyu:D7D52_36470(?) | 172 | 61.6 | 655 | 0 | -- | - | |||
| > amd:AMED_3760(193) | 184 | 59.2 | 642 | 21 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 184 | 59.2 | 642 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 184 | 59.2 | 642 | 21 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 184 | 59.2 | 642 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mpsc:MPSYJ_10150(168) | 162 | 60.5 | 641 | 5 | <- | putative RNA polymerase sigma factor | |||
| > kut:JJ691_47140(187) | 186 | 55.9 | 627 | 14 | <- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mmor:MMOR_08160(165) | 156 | 59.0 | 627 | 3 | <- | putative RNA polymerase sigma factor | |||
| > amyc:CU254_17200(193) | 181 | 58.0 | 626 | 14 | <- | RNA polymerase subunit sigma | |||
| > ksl:OG809_22635(?) | 161 | 63.4 | 624 | 0 | -- | - | |||
| > agra:AGRA3207_007836(197) | 182 | 59.9 | 620 | 30 | <- | RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 180 | 59.4 | 617 | 4 | <- | hypothetical protein | |||
| > pfla:Pflav_031030(196) | 181 | 56.9 | 617 | 38 | <- | rpoE_13; RNA polymerase sigma24 factor | |||
| > msa:Mycsm_06152(165) | 155 | 58.1 | 616 | 5 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > aprt:MUY14_29390(193) | 184 | 58.2 | 605 | 15 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > cai:Caci_2526(198) | 182 | 56.6 | 603 | 26 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > fal:FRAAL4137(171) | 161 | 60.2 | 585 | 5 | <- | putative ECF sub-family Sigma-70 factor | |||
| > fri:FraEuI1c_2645(203) | 176 | 54.0 | 577 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > dmat:Dmats_24000(178) | 173 | 56.1 | 575 | 33 | <- | RNA polymerase sigma factor | |||
| > abry:NYE86_06135(189) | 171 | 54.4 | 567 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 161 | 58.4 | 566 | 43 | <- | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 158 | 42.4 | 378 | 42 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 168 | 32.1 | 329 | 0 | -- | - | |||
| > ami:Amir_6736(217) | 180 | 36.1 | 276 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 180 | 35.6 | 274 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kal:KALB_8357(199) | 189 | 34.4 | 271 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > thug:KNN16_11270(184) | 177 | 37.3 | 264 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > ssyi:EKG83_44655(214) | 154 | 34.4 | 258 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sesp:BN6_80910(214) | 168 | 35.7 | 257 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgrg:L0C25_07670(?) | 157 | 33.1 | 250 | 0 | -- | - | |||
| > mmar:MODMU_4999(210) | 191 | 34.6 | 248 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acht:bsdcttw_13770(182) | 164 | 31.7 | 247 | 4 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jlv:G3257_14580(172) | 154 | 32.5 | 247 | 18 | -- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > mdr:MDOR_06240(174) | 156 | 32.7 | 247 | 2 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aef:GEV26_15875(232) | 180 | 33.3 | 245 | 6 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > spra:CP972_20380(276) | 185 | 36.2 | 245 | 48 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aez:C3E78_15795(241) | 185 | 31.4 | 244 | 6 | -- | RNA polymerase subunit sigma-70 | |||
| > awn:NQV15_15970(?) | 179 | 33.0 | 243 | 0 | -- | - | |||
| > ppel:H6H00_02580(171) | 179 | 35.8 | 242 | 18 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pses:PSCI_4157(171) | 172 | 32.0 | 239 | 26 | -- | RNA polymerase sigma factor | |||
| > blr:BRLA_c011480(181) | 151 | 31.8 | 238 | 19 | -- | K03088 | rpoE | sigX_3; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rant:RHODO2019_01705(?) | 183 | 32.8 | 238 | 0 | -- | - | |||
| > aeb:C6I20_00785(234) | 179 | 33.0 | 237 | 3 | -- | RNA polymerase subunit sigma-70 | |||
| > jaz:YQ44_13745(169) | 154 | 31.8 | 237 | 19 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > rpt:Rpal_1068(183) | 172 | 33.7 | 236 | 6 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > bse:Bsel_0096(184) | 170 | 31.2 | 235 | 7 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > jah:JAB4_028780(178) | 156 | 29.5 | 235 | 14 | -- | K23514 | fecI | fecI_4; putative RNA polymerase sigma factor FecI; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > tis:P3962_00150(169) | 154 | 31.8 | 234 | 3 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aer:AERYTH_03095(216) | 186 | 32.8 | 233 | 6 | -- | RNA polymerase sigma70 factor | |||
| > sdd:D9753_15265(259) | 183 | 34.4 | 232 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |