GFIT result for
mcb
|
GFIT result for
mcb
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mcb:Mycch_1362 (194 a.a.) |
-- |
RNA polymerase sigma factor, sigma-70 family | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > msak:MSAS_45680(179) | 178 | 71.3 | 801 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 179 | 71.5 | 799 | 4 | -> | RNA polymerase subunit sigma | |||
| > mbrd:MBRA_05770(179) | 176 | 72.2 | 792 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 178 | 70.8 | 786 | 4 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mao:MAP4_4342(179) | 178 | 70.8 | 785 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 178 | 70.8 | 785 | 5 | -> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 178 | 70.8 | 785 | 5 | -> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 178 | 70.8 | 785 | 5 | -> | hypothetical protein | |||
| > mste:MSTE_04816(184) | 182 | 67.0 | 778 | 4 | -> | putative RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 182 | 66.5 | 776 | 3 | -> | RNA polymerase subunit sigma | |||
| > mpaa:MKK62_19730(179) | 173 | 69.9 | 774 | 4 | -> | RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 179 | 70.4 | 773 | 4 | -> | putative RNA polymerase sigma factor | |||
| > msao:MYCSP_21660(184) | 182 | 65.9 | 772 | 5 | -> | RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 184 | 68.5 | 770 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mnv:MNVI_26030(179) | 177 | 68.4 | 770 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 176 | 69.9 | 767 | 5 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 176 | 70.5 | 766 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 184 | 67.9 | 766 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 186 | 68.3 | 765 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 183 | 68.3 | 760 | 4 | -> | RNA polymerase subunit sigma | |||
| > mshg:MSG_00969(182) | 178 | 68.0 | 759 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mmm:W7S_21510(183) | 183 | 68.3 | 757 | 3 | -> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 183 | 68.3 | 757 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mir:OCQ_44170(183) | 183 | 68.3 | 756 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mman:MMAN_31190(183) | 176 | 69.9 | 756 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 174 | 71.3 | 755 | 5 | -> | putative RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 185 | 67.0 | 754 | 6 | -> | putative RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 180 | 65.0 | 751 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 180 | 66.1 | 750 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mabl:MMASJCM_4707(185) | 182 | 64.3 | 744 | 1 | -> | RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 169 | 68.6 | 744 | 6 | -> | RNA polymerase subunit sigma | |||
| > mmat:MMAGJ_46560(188) | 187 | 65.8 | 744 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 182 | 64.3 | 744 | 1 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > msto:MSTO_28290(183) | 179 | 69.3 | 744 | 5 | -> | putative RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 178 | 65.7 | 740 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 180 | 64.4 | 740 | 2 | -> | RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 180 | 63.9 | 738 | 3 | -> | RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 162 | 71.6 | 736 | 2 | -> | putative RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 182 | 63.2 | 736 | 5 | -> | sigX; RNA polymerase sigma factor SigX | |||
| > mmag:MMAD_32210(172) | 168 | 69.0 | 734 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 180 | 63.9 | 733 | 3 | -> | RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 182 | 62.6 | 724 | 3 | -> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mll:B1R94_04110(180) | 173 | 66.5 | 719 | 5 | -> | RNA polymerase subunit sigma | |||
| > mia:OCU_42820(153) | 159 | 71.7 | 698 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 159 | 71.7 | 698 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 159 | 71.1 | 694 | 2 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > nah:F5544_08000(204) | 175 | 62.3 | 692 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 184 | 61.4 | 687 | 7 | -> | RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 194 | 59.3 | 678 | 0 | -- | - | |||
| > kut:JJ691_47140(187) | 178 | 61.2 | 672 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mpsc:MPSYJ_10150(168) | 163 | 61.3 | 652 | 5 | -> | putative RNA polymerase sigma factor | |||
| > amd:AMED_3760(193) | 180 | 57.8 | 641 | 21 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 180 | 57.8 | 641 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 180 | 57.8 | 641 | 21 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 180 | 57.8 | 641 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mkn:MKAN_19960(157) | 148 | 68.9 | 636 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > nsr:NS506_06042(190) | 194 | 57.2 | 631 | 4 | -> | hypothetical protein | |||
| > pfla:Pflav_031030(196) | 179 | 56.4 | 630 | 38 | -> | rpoE_13; RNA polymerase sigma24 factor | |||
| > mrh:MycrhN_1984(183) | 188 | 52.1 | 618 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > agra:AGRA3207_007836(197) | 175 | 58.3 | 617 | 30 | -> | RNA polymerase sigma factor | |||
| > amyc:CU254_17200(193) | 179 | 57.5 | 610 | 14 | -> | RNA polymerase subunit sigma | |||
| > fal:FRAAL4137(171) | 168 | 55.4 | 602 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > aprt:MUY14_29390(193) | 179 | 55.9 | 599 | 15 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > msa:Mycsm_06152(165) | 162 | 56.8 | 599 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > ksl:OG809_22635(?) | 164 | 59.1 | 595 | 0 | -- | - | |||
| > fri:FraEuI1c_2645(203) | 178 | 56.7 | 589 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mmor:MMOR_08160(165) | 158 | 56.3 | 573 | 3 | -> | putative RNA polymerase sigma factor | |||
| > cai:Caci_2526(198) | 188 | 52.1 | 572 | 26 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > abry:NYE86_06135(189) | 158 | 54.4 | 558 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 178 | 52.2 | 552 | 33 | -> | RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 169 | 52.1 | 522 | 43 | -> | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 157 | 40.1 | 359 | 42 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 164 | 32.3 | 323 | 0 | -- | - | |||
| > mmar:MODMU_4999(210) | 196 | 36.7 | 290 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > thug:KNN16_11270(184) | 161 | 37.3 | 282 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > ami:Amir_6736(217) | 186 | 37.6 | 281 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 186 | 37.1 | 279 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stsi:A4E84_00005(381) | 175 | 36.6 | 274 | 17 | -- | hypothetical protein | |||
| > kal:KALB_8357(199) | 178 | 33.7 | 271 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rant:RHODO2019_01705(?) | 167 | 35.3 | 267 | 0 | -- | - | |||
| > aer:AERYTH_03095(216) | 190 | 32.1 | 266 | 6 | -- | RNA polymerase sigma70 factor | |||
| > sgm:GCM10017557_47180(258) | 203 | 31.5 | 263 | 22 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spra:CP972_20380(276) | 156 | 36.5 | 263 | 48 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfy:GFH48_18345(258) | 205 | 31.7 | 262 | 31 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sseo:D0Z67_16470(261) | 183 | 32.8 | 262 | 15 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tis:P3962_00150(169) | 156 | 32.7 | 262 | 3 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgal:CP966_20830(256) | 183 | 32.8 | 261 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sphw:NFX46_02755(259) | 183 | 32.8 | 261 | 28 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sroi:IAG44_17035(258) | 205 | 31.7 | 261 | 23 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 193 | 33.7 | 261 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > yia:LO772_19945(261) | 192 | 34.4 | 260 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smao:CAG99_11270(260) | 192 | 32.8 | 259 | 32 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spun:BFF78_18770(261) | 205 | 32.2 | 259 | 31 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sact:DMT42_22150(261) | 205 | 31.7 | 258 | 23 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sanu:K7396_19440(262) | 193 | 32.6 | 258 | 14 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scad:DN051_17815(256) | 184 | 33.2 | 258 | 31 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scyn:N8I84_22950(?) | 204 | 31.4 | 258 | 0 | -- | - | |||
| > sdd:D9753_15265(259) | 157 | 36.9 | 258 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgv:B1H19_19700(261) | 193 | 32.6 | 258 | 15 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sld:T261_4497(261) | 193 | 32.6 | 258 | 18 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |