GFIT result for
mste
|
GFIT result for
mste
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mste:MSTE_04816 (184 a.a.) |
-- |
putative RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > miz:BAB75_26190(184) | 184 | 94.6 | 1127 | 3 | <> | RNA polymerase subunit sigma | |||
| > msal:DSM43276_04475(184) | 184 | 94.6 | 1125 | 5 | <> | sigX; RNA polymerase sigma factor SigX | |||
| > mabb:MASS_4680(184) | 184 | 91.3 | 1094 | 2 | <> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mabl:MMASJCM_4707(185) | 184 | 91.3 | 1094 | 1 | <> | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 184 | 91.3 | 1094 | 1 | <> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > msao:MYCSP_21660(184) | 183 | 89.1 | 1079 | 5 | <> | RNA polymerase sigma factor | |||
| > mab:MAB_4652(185) | 184 | 88.6 | 1072 | 3 | <> | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mphu:MPHO_00980(181) | 179 | 77.1 | 845 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 179 | 77.1 | 843 | 4 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 177 | 72.9 | 811 | 4 | -> | RNA polymerase sigma factor | |||
| > maub:MAUB_11840(185) | 180 | 73.3 | 808 | 6 | -> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 181 | 70.2 | 798 | 4 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mao:MAP4_4342(179) | 176 | 71.0 | 796 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 176 | 71.0 | 796 | 5 | -> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 176 | 71.0 | 796 | 5 | -> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 176 | 71.0 | 796 | 5 | -> | hypothetical protein | |||
| > msak:MSAS_45680(179) | 176 | 71.0 | 796 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 177 | 70.1 | 794 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mseo:MSEO_49050(182) | 182 | 69.8 | 793 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 180 | 68.9 | 791 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 177 | 70.1 | 789 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 179 | 69.8 | 788 | 5 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mcoo:MCOO_42530(167) | 166 | 72.3 | 780 | 2 | -> | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 182 | 67.0 | 778 | 2 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > mpag:C0J29_05965(189) | 175 | 69.1 | 778 | 4 | -> | RNA polymerase subunit sigma | |||
| > msto:MSTO_28290(183) | 177 | 71.2 | 778 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 178 | 69.1 | 777 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 183 | 67.8 | 769 | 4 | -> | RNA polymerase subunit sigma | |||
| > mir:OCQ_44170(183) | 183 | 67.8 | 765 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 183 | 67.8 | 765 | 3 | -> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 183 | 67.8 | 765 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msim:MSIM_15410(187) | 178 | 66.9 | 763 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 173 | 69.4 | 761 | 3 | -> | putative RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 165 | 70.3 | 728 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 179 | 64.8 | 718 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 179 | 64.2 | 711 | 3 | -> | RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 179 | 63.7 | 709 | 2 | -> | RNA polymerase sigma factor | |||
| > mmat:MMAGJ_46560(188) | 167 | 65.9 | 706 | 6 | -> | putative RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 181 | 63.5 | 705 | 4 | -> | putative RNA polymerase sigma factor | |||
| > mll:B1R94_04110(180) | 178 | 64.6 | 704 | 5 | -> | RNA polymerase subunit sigma | |||
| > mdx:BTO20_26575(178) | 178 | 64.6 | 699 | 6 | -> | RNA polymerase subunit sigma | |||
| > mpae:K0O64_03790(179) | 179 | 62.6 | 695 | 3 | -> | RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 172 | 64.5 | 695 | 0 | -- | - | |||
| > mia:OCU_42820(153) | 153 | 71.2 | 684 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 153 | 71.2 | 684 | 3 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 153 | 70.6 | 680 | 2 | -> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > many:MANY_47430(178) | 178 | 60.7 | 678 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mrh:MycrhN_1984(183) | 172 | 59.9 | 677 | 3 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > nah:F5544_08000(204) | 176 | 59.7 | 673 | 8 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mpsc:MPSYJ_10150(168) | 165 | 60.6 | 671 | 5 | -> | putative RNA polymerase sigma factor | |||
| > mrf:MJO55_27030(184) | 177 | 59.3 | 655 | 7 | -> | RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 172 | 63.4 | 654 | 4 | -> | hypothetical protein | |||
| > msa:Mycsm_06152(165) | 163 | 60.1 | 642 | 5 | -> | RNA polymerase sigma factor, sigma-70 family | |||
| > agra:AGRA3207_007836(197) | 183 | 56.8 | 641 | 30 | -> | RNA polymerase sigma factor | |||
| > amd:AMED_3760(193) | 175 | 60.6 | 639 | 21 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 175 | 60.6 | 639 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 175 | 60.6 | 639 | 21 | -> | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 175 | 60.6 | 639 | 22 | -> | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > kut:JJ691_47140(187) | 182 | 57.7 | 639 | 14 | -> | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > mkn:MKAN_19960(157) | 153 | 65.4 | 628 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amyc:CU254_17200(193) | 175 | 58.3 | 611 | 14 | -> | RNA polymerase subunit sigma | |||
| > ksl:OG809_22635(?) | 162 | 59.3 | 608 | 0 | -- | - | |||
| > mmor:MMOR_08160(165) | 160 | 56.9 | 603 | 3 | -> | putative RNA polymerase sigma factor | |||
| > aprt:MUY14_29390(193) | 175 | 56.0 | 589 | 15 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > fri:FraEuI1c_2645(203) | 182 | 53.3 | 578 | 14 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > pfla:Pflav_031030(196) | 176 | 50.6 | 569 | 38 | -> | rpoE_13; RNA polymerase sigma24 factor | |||
| > fal:FRAAL4137(171) | 164 | 52.4 | 555 | 5 | -> | putative ECF sub-family Sigma-70 factor | |||
| > abry:NYE86_06135(189) | 183 | 49.2 | 542 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 179 | 52.0 | 542 | 33 | -> | RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 163 | 54.6 | 540 | 43 | -> | RNA polymerase sigma factor | |||
| > cai:Caci_2526(198) | 162 | 51.9 | 514 | 26 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > kbs:EPA93_28450(202) | 163 | 39.3 | 372 | 42 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 166 | 34.3 | 348 | 0 | -- | - | |||
| > sgrg:L0C25_07670(?) | 179 | 36.3 | 290 | 0 | -- | - | |||
| > ami:Amir_6736(217) | 168 | 35.1 | 281 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 168 | 34.5 | 280 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salb:XNR_3527(268) | 183 | 35.0 | 276 | 18 | -- | K03088 | rpoE | BldN RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sky:D0C37_19235(268) | 183 | 35.0 | 276 | 15 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svio:HWN34_17960(268) | 183 | 35.0 | 276 | 21 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aeb:C6I20_00785(234) | 187 | 34.2 | 275 | 3 | -- | RNA polymerase subunit sigma-70 | |||
| > sact:DMT42_22150(261) | 174 | 36.8 | 275 | 23 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sanu:K7396_19440(262) | 183 | 35.0 | 275 | 14 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgv:B1H19_19700(261) | 183 | 35.0 | 275 | 15 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slau:SLA_3247(270) | 190 | 35.8 | 275 | 36 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sld:T261_4497(261) | 183 | 35.0 | 275 | 18 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snr:SNOUR_22510(262) | 183 | 35.0 | 275 | 17 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor, TIGR02952 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sseo:D0Z67_16470(261) | 178 | 37.6 | 275 | 15 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stre:GZL_04927(262) | 183 | 35.0 | 275 | 21 | -- | K03088 | rpoE | RNA polymerase C sigma-24 subunit C ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > syun:MOV08_22925(?) | 183 | 35.0 | 275 | 0 | -- | - | |||
| > yia:LO772_19945(261) | 185 | 35.1 | 275 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgal:CP966_20830(256) | 178 | 37.6 | 274 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slv:SLIV_21180(264) | 190 | 35.3 | 274 | 23 | -- | K03088 | rpoE | ECF sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sphw:NFX46_02755(259) | 178 | 37.6 | 274 | 28 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 185 | 35.7 | 274 | 14 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > thug:KNN16_11270(184) | 180 | 36.7 | 274 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > sall:SAZ_20975(262) | 183 | 35.0 | 273 | 22 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salu:DC74_3969(262) | 183 | 35.0 | 273 | 20 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > saqu:EJC51_27730(257) | 174 | 36.2 | 273 | 34 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sco:SCO3323(177) | 174 | 36.2 | 273 | 22 | -- | K03088 | rpoE | SCE68.21; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scoe:CP976_24770(256) | 174 | 36.2 | 273 | 30 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |