KEGG   PATHWAY: eai04622
Entry
eai04622                    Pathway                                
Name
RIG-I-like receptor signaling pathway - Equus asinus (ass)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
eai04622  RIG-I-like receptor signaling pathway
eai04622

Organism
Equus asinus (ass) [GN:eai]
Gene
106841474  DDX58; antiviral innate immune response receptor RIG-I isoform X1 [KO:K12646] [EC:5.6.2.6]
106843229  IFIH1; interferon-induced helicase C domain-containing protein 1 isoform X2 [KO:K12647] [EC:5.6.2.6]
106825795  ZNFX1; NFX1-type zinc finger-containing protein 1 [KO:K27391]
106847679  MAVS; mitochondrial antiviral-signaling protein [KO:K12648]
106826477  DHX58; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX58 [KO:K12649] [EC:5.6.2.6]
106839629  TRAF3; TNF receptor-associated factor 3 [KO:K03174]
106843101  TANK; TRAF family member-associated NF-kappa-B activator isoform X3 [KO:K12650]
106830985  AZI2; 5-azacytidine-induced protein 2 isoform X1 [KO:K12651]
106826254  TBKBP1; LOW QUALITY PROTEIN: TANK-binding kinase 1-binding protein 1 [KO:K12652]
106828814  IKBKG; NF-kappa-B essential modulator isoform X1 [KO:K07210]
106824389  TBK1; serine/threonine-protein kinase TBK1 isoform X1 [KO:K05410] [EC:2.7.11.10]
106823378  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
106824161  IRF3; interferon regulatory factor 3 isoform X3 [KO:K05411]
106824966  IRF7; interferon regulatory factor 7 isoform X2 [KO:K09447]
106824699  interferon alpha-2 [KO:K05414]
106824700  LOW QUALITY PROTEIN: interferon alpha-4 [KO:K05414]
106824701  interferon alpha-2-like [KO:K05414]
106828271  interferon alpha-2-like [KO:K05414]
106824784  interferon alpha-2 isoform X2 [KO:K05414]
106824785  interferon alpha-2-like [KO:K05414]
106824786  interferon alpha-6-like [KO:K05414]
106833890  interferon alpha-2-like [KO:K05414]
123280233  interferon alpha-2-like [KO:K05414]
123280237  interferon alpha-2-like [KO:K05414]
123280245  interferon alpha-2-like [KO:K05414]
123280259  interferon alpha-2-like [KO:K05414]
106828272  interferon beta-like [KO:K05415]
106834164  interferon beta-like [KO:K05415]
106834179  interferon beta-like [KO:K05415]
106834202  interferon beta [KO:K05415]
123280255  interferon beta [KO:K05415]
123280293  interferon beta-like [KO:K05415]
106824688  interferon omega-2-like [KO:K05440]
106824698  interferon omega-2 [KO:K05440]
106824708  interferon omega-1-like [KO:K05440]
106828270  interferon omega-1-like [KO:K05440]
123280286  interferon omega-1 [KO:K05440]
123280292  LOW QUALITY PROTEIN: interferon omega-1-like [KO:K05440]
106824788  IFNE; interferon epsilon [KO:K05442]
106838967  IFNK; interferon kappa [KO:K05441]
106822449  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein [KO:K03171]
106822169  FADD; FAS-associated death domain protein [KO:K02373]
106847888  RIPK1; receptor-interacting serine/threonine-protein kinase 1 isoform X1 [KO:K02861] [EC:2.7.11.1]
106823493  CASP8; caspase-8 [KO:K04398] [EC:3.4.22.61]
106823486  CASP10; LOW QUALITY PROTEIN: caspase-10 [KO:K04400] [EC:3.4.22.63]
106846705  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
106828957  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
106836078  NFKBIB; NF-kappa-B inhibitor beta [KO:K02581]
106838803  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
106825951  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
106833569  RELA; transcription factor p65 isoform X1 [KO:K04735]
106845532  TRAF2; TNF receptor-associated factor 2 isoform X4 [KO:K03173] [EC:2.3.2.27]
106847421  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
106837480  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
106843371  MAP3K1; LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 1 [KO:K04416] [EC:2.7.11.25]
106839421  MAPK10; mitogen-activated protein kinase 10 isoform X2 [KO:K04440] [EC:2.7.11.24]
106831384  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
106843729  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
106824547  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
106824582  MAPK13; mitogen-activated protein kinase 13 isoform X1 [KO:K04441] [EC:2.7.11.24]
106846005  MAPK12; mitogen-activated protein kinase 12 isoform X1 [KO:K04441] [EC:2.7.11.24]
106846006  MAPK11; mitogen-activated protein kinase 11 isoform X1 [KO:K04441] [EC:2.7.11.24]
106835113  CXCL8; interleukin-8 [KO:K10030]
106825034  TNF; tumor necrosis factor isoform X1 [KO:K03156]
106824114  IL12A; interleukin-12 subunit alpha [KO:K05406]
106832166  IL12B; interleukin-12 subunit beta [KO:K05425]
106846789  CXCL10; C-X-C motif chemokine 10 [KO:K12671]
106828524  ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 [KO:K12968] [EC:3.5.4.37]
106837979  E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1 [KO:K10652] [EC:2.3.2.27]
106843847  LOW QUALITY PROTEIN: E3 ubiquitin/ISG15 ligase TRIM25-like [KO:K10652] [EC:2.3.2.27]
106822687  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD isoform X1 [KO:K08601] [EC:3.4.19.12]
106833971  RNF125; E3 ubiquitin-protein ligase RNF125 isoform X3 [KO:K12170] [EC:2.3.2.27]
106845250  ISG15; ubiquitin-like protein ISG15 [KO:K12159]
106843682  ATG5; autophagy protein 5 isoform X1 [KO:K08339]
106831472  ATG12; ubiquitin-like protein ATG12 [KO:K08336]
106840304  NLRX1; NLR family member X1 [KO:K12653]
106839235  STING1; stimulator of interferon genes protein [KO:K12654]
106826966  OTUD5; LOW QUALITY PROTEIN: OTU domain-containing protein 5 [KO:K12655] [EC:3.4.19.12]
106835680  SIKE1; suppressor of IKBKE 1 [KO:K12656]
106830860  DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 [KO:K11594] [EC:5.6.2.7]
106834400  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
106847572  TKFC; triokinase/FMN cyclase isoform X1 [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
eai04010  MAPK signaling pathway
eai04120  Ubiquitin mediated proteolysis
eai04210  Apoptosis
eai04630  JAK-STAT signaling pathway
KO pathway
ko04622   
LinkDB

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