KEGG   PATHWAY: shon04360
Entry
shon04360                   Pathway                                
Name
Axon guidance - Sturnira hondurensis
Description
Axon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are read by growth cone receptors, and signal transduction pathways downstream of these receptors converge onto the Rho GTPases to elicit changes in cytoskeletal organization that determine which way the growth cone will turn.
Class
Organismal Systems; Development and regeneration
Pathway map
shon04360  Axon guidance
shon04360

Other DBs
GO: 0007411
Organism
Sturnira hondurensis [GN:shon]
Gene
118990069  NTNG1; netrin-G1 isoform X1 [KO:K07522]
118980114  NTNG2; netrin-G2 isoform X1 [KO:K16359]
118983182  LRRC4C; leucine-rich repeat-containing protein 4C [KO:K07523]
118989181  LRRC4; leucine-rich repeat-containing protein 4 [KO:K16351]
118974627  NTN1; netrin-1 isoform X1 [KO:K06843]
118978783  NTN3; netrin-3 isoform X1 [KO:K06844]
119002319  NTN4; netrin-4 isoform X1 [KO:K06845]
118978779  netrin receptor DCC [KO:K06765]
118985484  PLCG1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X1 [KO:K01116] [EC:3.1.4.11]
118983037  PLCG2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 isoform X1 [KO:K05859] [EC:3.1.4.11]
118983010  TRPC1; short transient receptor potential channel 1 isoform X1 [KO:K04964]
118995490  TRPC3; short transient receptor potential channel 3 isoform X1 [KO:K04966]
118994868  TRPC4; short transient receptor potential channel 4 isoform X1 [KO:K04967]
118975675  TRPC6; short transient receptor potential channel 6 [KO:K04969]
118975194  PPP3CC; serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
118993481  PPP3CB; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
118979951  PPP3CA; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
118988459  PPP3R1; calcineurin subunit B type 1 isoform X1 [KO:K06268]
118979747  PPP3R2; calcineurin subunit B type 2 [KO:K06268]
118996504  NFATC2; nuclear factor of activated T-cells, cytoplasmic 2 isoform X1 [KO:K17332]
118983825  NFATC3; nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333]
118980870  NFATC4; nuclear factor of activated T-cells, cytoplasmic 4 isoform X1 [KO:K17334]
118988708  PTK2; focal adhesion kinase 1 isoform X1 [KO:K05725] [EC:2.7.10.2]
119000185  FYN; tyrosine-protein kinase Fyn isoform X1 [KO:K05703] [EC:2.7.10.2]
118985454  SRC; proto-oncogene tyrosine-protein kinase Src isoform X1 [KO:K05704] [EC:2.7.10.2]
118995001  RAC1; ras-related C3 botulinum toxin substrate 1 isoform X1 [KO:K04392]
119002327  RAC2; ras-related C3 botulinum toxin substrate 2 [KO:K07860]
119002854  RAC3; ras-related C3 botulinum toxin substrate 3 isoform X1 [KO:K07861]
118977719  CDC42; cell division control protein 42 homolog isoform X1 [KO:K04393]
118999393  ABLIM1; actin-binding LIM protein 1 isoform X1 [KO:K07520]
118986175  ABLIM3; actin-binding LIM protein 3 isoform X1 [KO:K07520]
118987261  ABLIM2; actin-binding LIM protein 2 isoform X1 [KO:K07520]
118997539  NCK1; cytoplasmic protein NCK1 isoform X1 [KO:K07365]
118980972  PAK2; serine/threonine-protein kinase PAK 2 [KO:K04410] [EC:2.7.11.1]
118996645  PAK3; serine/threonine-protein kinase PAK 3 [KO:K05733] [EC:2.7.11.1]
118976301  PAK4; serine/threonine-protein kinase PAK 4 isoform X1 [KO:K05734] [EC:2.7.11.1]
118990866  PAK5; serine/threonine-protein kinase PAK 5 [KO:K05736] [EC:2.7.11.1]
118993596  serine/threonine-protein kinase PAK 6 [KO:K05735] [EC:2.7.11.1]
118989480  RHOA; transforming protein RhoA [KO:K04513]
118976915  ROCK1; rho-associated protein kinase 1 isoform X1 [KO:K04514] [EC:2.7.11.39]
118988767  ROCK2; rho-associated protein kinase 2 isoform X1 [KO:K17388] [EC:2.7.11.39]
118999735  UNC5A; netrin receptor UNC5A isoform X1 [KO:K07521]
118993033  UNC5D; netrin receptor UNC5D [KO:K07521]
118993446  UNC5B; netrin receptor UNC5B isoform X1 [KO:K07521]
118987088  UNC5C; netrin receptor UNC5C [KO:K07521]
118991117  PTPN11; tyrosine-protein phosphatase non-receptor type 11 isoform X1 [KO:K07293] [EC:3.1.3.48]
118992005  RGMA; repulsive guidance molecule A [KO:K23096]
118987776  NEO1; neogenin isoform X1 [KO:K06766]
118988104  MYL5; myosin light chain 5 [KO:K12753]
118985434  MYL9; myosin regulatory light polypeptide 9 [KO:K12755]
118997067  myosin regulatory light polypeptide 9 isoform X1 [KO:K12757]
118997068  myosin regulatory light chain 12B-like [KO:K12757]
118974946  ARHGEF12; rho guanine nucleotide exchange factor 12 isoform X1 [KO:K07532]
118982034  LRIG2; leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X1 [KO:K24609]
118990168  EFNA1; ephrin-A1 [KO:K05462]
118990172  EFNA3; ephrin-A3 isoform X1 [KO:K05462]
118990174  EFNA4; ephrin-A4 isoform X1 [KO:K05462]
118984407  EFNA2; ephrin-A2 isoform X1 [KO:K05462]
118977270  EFNA5; ephrin-A5 isoform X1 [KO:K05462]
118974749  EFNB3; ephrin-B3 [KO:K05463]
119002005  EFNB2; ephrin-B2 [KO:K05463]
118986915  EFNB1; ephrin-B1 [KO:K05463]
118997012  EPHA1; ephrin type-A receptor 1 isoform X1 [KO:K05102] [EC:2.7.10.1]
118986305  EPHA2; ephrin type-A receptor 2 isoform X1 [KO:K05103] [EC:2.7.10.1]
118995857  EPHA3; ephrin type-A receptor 3 [KO:K05104] [EC:2.7.10.1]
118975326  EPHA4; ephrin type-A receptor 4 isoform X1 [KO:K05105] [EC:2.7.10.1]
118975784  EPHA5; ephrin type-A receptor 5 isoform X1 [KO:K05106] [EC:2.7.10.1]
118995852  EPHA6; ephrin type-A receptor 6 isoform X1 [KO:K05107] [EC:2.7.10.1]
118982286  EPHA7; ephrin type-A receptor 7 isoform X1 [KO:K05108] [EC:2.7.10.1]
118977806  EPHA8; ephrin type-A receptor 8 [KO:K05109] [EC:2.7.10.1]
118997549  EPHB1; ephrin type-B receptor 1 [KO:K05110] [EC:2.7.10.1]
118977832  EPHB2; ephrin type-B receptor 2 isoform X1 [KO:K05111] [EC:2.7.10.1]
119004265  EPHB3; ephrin type-B receptor 3 isoform X1 [KO:K05112] [EC:2.7.10.1]
118992857  EPHB4; ephrin type-B receptor 4 [KO:K05113] [EC:2.7.10.1]
119002893  EPHB6; ephrin type-B receptor 6 isoform X1 [KO:K05114] [EC:2.7.10.1]
118980343  ABL1; tyrosine-protein kinase ABL1 isoform X1 [KO:K06619] [EC:2.7.10.2]
119003140  ENAH; protein enabled homolog isoform X1 [KO:K05746]
118977386  RASA1; ras GTPase-activating protein 1 isoform X1 [KO:K04352]
118999138  NGEF; ephexin-1 [KO:K07525]
118982230  HRAS; GTPase HRas isoform X1 [KO:K02833]
118978497  KRAS; GTPase KRas isoform X1 [KO:K07827]
118981977  NRAS; GTPase NRas [KO:K07828]
119000423  MAPK3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
119001903  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
118992936  NCK2; cytoplasmic protein NCK2 [KO:K19862]
118995947  RGS3; regulator of G-protein signaling 3 isoform X1 [KO:K07524]
118979932  CXCL12; stromal cell-derived factor 1 isoform X1 [KO:K10031]
118974799  CXCR4; C-X-C chemokine receptor type 4 [KO:K04189]
118989455  GNAI2; guanine nucleotide-binding protein G(i) subunit alpha-2 [KO:K04630]
118990034  GNAI3; guanine nucleotide-binding protein G(i) subunit alpha [KO:K04630]
119000994  GNAI1; guanine nucleotide-binding protein G(i) subunit alpha-1 [KO:K04630]
118990291  SLIT1; slit homolog 1 protein [KO:K06838]
118986285  SLIT2; slit homolog 2 protein isoform X1 [KO:K06839]
118994931  SLIT3; slit homolog 3 protein isoform X1 [KO:K06850]
118995871  ROBO1; roundabout homolog 1 isoform X1 [KO:K06753]
118995873  ROBO2; roundabout homolog 2 isoform X1 [KO:K06754]
118981471  ROBO3; roundabout homolog 3 isoform X1 [KO:K06755]
118998718  SRGAP1; SLIT-ROBO Rho GTPase-activating protein 1 isoform X1 [KO:K07526]
118993359  SRGAP3; SLIT-ROBO Rho GTPase-activating protein 3 isoform X1 [KO:K07526]
119001701  SRGAP2; SLIT-ROBO Rho GTPase-activating protein 2 isoform X1 [KO:K07526]
118989451  SEMA3B; semaphorin-3B isoform X1 [KO:K06840]
118989458  SEMA3F; semaphorin-3F isoform X1 [KO:K06840]
119000982  SEMA3D; semaphorin-3D [KO:K06840]
119000983  SEMA3A; semaphorin-3A [KO:K06840]
119000984  SEMA3E; semaphorin-3E [KO:K06840]
119000990  SEMA3C; semaphorin-3C [KO:K06840]
118993372  SEMA3G; semaphorin-3G [KO:K06840]
119004229  PLXNA2; plexin-A2 isoform X1 [KO:K06820]
118989136  PLXNA4; plexin-A4 [KO:K06820]
118978560  PLXNA1; plexin-A1 isoform X1 [KO:K06820]
118994309  PLXNA3; plexin-A3 isoform X1 [KO:K06820]
118982713  NRP1; neuropilin-1 isoform X1 [KO:K06724]
118994298  L1CAM; neural cell adhesion molecule L1 isoform X1 [KO:K06550]
118992786  LIMK1; LIM domain kinase 1 isoform X1 [KO:K05743] [EC:2.7.11.1]
118991309  LIMK2; LIM domain kinase 2 isoform X1 [KO:K05744] [EC:2.7.11.1]
118991745  CFL1; cofilin-1 [KO:K05765]
118993942  CFL2; cofilin-2 isoform X1 [KO:K05765]
118991802  RHOD; rho-related GTP-binding protein RhoD isoform X1 [KO:K07530]
118976490  RND1; rho-related GTP-binding protein Rho6 [KO:K07531]
118991944  FES; tyrosine-protein kinase Fes/Fps isoform X1 [KO:K07527] [EC:2.7.10.2]
119001377  DPYSL5; dihydropyrimidinase-related protein 5 [KO:K07529]
118981829  DPYSL2; dihydropyrimidinase-related protein 2 isoform X1 [KO:K07528]
118975530  CDK5; cyclin-dependent-like kinase 5 [KO:K02090] [EC:2.7.11.22]
118986594  GSK3B; glycogen synthase kinase-3 beta isoform X1 [KO:K03083] [EC:2.7.11.26]
118999504  SEMA4G; semaphorin-4G isoform X1 [KO:K06521]
118991955  SEMA4B; semaphorin-4B isoform X1 [KO:K06521]
119000108  SEMA4F; semaphorin-4F isoform X1 [KO:K06521]
118992962  SEMA4C; semaphorin-4C [KO:K06521]
118978981  SEMA4D; semaphorin-4D isoform X1 [KO:K06521]
118990739  SEMA5B; semaphorin-5B isoform X1 [KO:K06841]
118998678  SEMA5A; semaphorin-5A isoform X1 [KO:K06841]
118984524  SEMA6B; semaphorin-6B isoform X1 [KO:K06842]
118992589  SEMA6D; semaphorin-6D isoform X1 [KO:K06842]
118977414  SEMA6A; semaphorin-6A isoform X1 [KO:K06842]
118988868  PLXNB2; plexin-B2 [KO:K06821]
118989517  PLXNB1; plexin-B1 isoform X1 [KO:K06821]
118994292  PLXNB3; plexin-B3 isoform X1 [KO:K06821]
118990300  RAF1; RAF proto-oncogene serine/threonine-protein kinase [KO:K04366] [EC:2.7.11.1]
118987758  SEMA7A; semaphorin-7A [KO:K06529]
118999940  PLXNC1; plexin-C1 [KO:K06572]
118991564  integrin beta-1 [KO:K05719]
118989379  SHH; sonic hedgehog protein [KO:K11988]
118993710  PTCH1; protein patched homolog 1 isoform X1 [KO:K06225]
118989161  SMO; smoothened homolog [KO:K06226]
119003729  PRKCA; protein kinase C alpha type [KO:K02677] [EC:2.7.11.13]
118990814  ILK; integrin-linked protein kinase [KO:K06272] [EC:2.7.11.1]
118994731  BOC; brother of CDO isoform X1 [KO:K20020]
118983356  WNT5A; protein Wnt-5a isoform X1 [KO:K00444]
118999993  WNT5B; protein Wnt-5b [KO:K00444]
118984344  FZD3; frizzled-3 [KO:K02329]
118997555  RYK; tyrosine-protein kinase RYK isoform X1 [KO:K05128] [EC:2.7.10.1]
118983461  CAMK2B; calcium/calmodulin-dependent protein kinase type II subunit beta isoform X1 [KO:K04515] [EC:2.7.11.17]
118986155  CAMK2A; calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1 [KO:K04515] [EC:2.7.11.17]
118993496  CAMK2G; calcium/calmodulin-dependent protein kinase type II subunit gamma isoform X1 [KO:K04515] [EC:2.7.11.17]
118980016  CAMK2D; calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1 [KO:K04515] [EC:2.7.11.17]
118977789  WNT4; protein Wnt-4 [KO:K00408]
118997522  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
118986375  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
118995662  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
118982454  PIK3R3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649]
118975178  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
118998595  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
118985111  PDPK1; 3-phosphoinositide-dependent protein kinase 1 [KO:K06276] [EC:2.7.11.1]
118982724  PARD3; partitioning defective 3 homolog isoform X1 [KO:K04237]
118998179  PRKCZ; protein kinase C zeta type isoform X1 [KO:K18952] [EC:2.7.11.13]
118996496  PARD6B; partitioning defective 6 homolog beta [KO:K06093]
118983855  PARD6A; partitioning defective 6 homolog alpha isoform X1 [KO:K06093]
118979953  PARD6G; partitioning defective 6 homolog gamma [KO:K06093]
118991216  SSH1; protein phosphatase Slingshot homolog 1 isoform X1 [KO:K05766] [EC:3.1.3.16 3.1.3.48]
118991806  SSH3; protein phosphatase Slingshot homolog 3 isoform X1 [KO:K05766] [EC:3.1.3.16 3.1.3.48]
119003731  SSH2; protein phosphatase Slingshot homolog 2 isoform X1 [KO:K05766] [EC:3.1.3.16 3.1.3.48]
118996527  BMP7; bone morphogenetic protein 7 [KO:K16621]
118979400  GDF7; growth/differentiation factor 7 [KO:K20013]
118985221  BMPR2; bone morphogenetic protein receptor type-2 isoform X1 [KO:K04671] [EC:2.7.11.30]
118987039  BMPR1B; bone morphogenetic protein receptor type-1B [KO:K13578] [EC:2.7.11.30]
Compound
C00076  Calcium cation
Reference
  Authors
Guan KL, Rao Y.
  Title
Signalling mechanisms mediating neuronal responses to guidance cues.
  Journal
Nat Rev Neurosci 4:941-56 (2003)
DOI:10.1038/nrn1254
Reference
  Authors
Govek EE, Newey SE, Van Aelst L.
  Title
The role of the Rho GTPases in neuronal development.
  Journal
Genes Dev 19:1-49 (2005)
DOI:10.1101/gad.1256405
Reference
  Authors
Huber AB, Kolodkin AL, Ginty DD, Cloutier JF.
  Title
Signaling at the growth cone: ligand-receptor complexes and the control of axon growth and guidance.
  Journal
Annu Rev Neurosci 26:509-63 (2003)
DOI:10.1146/annurev.neuro.26.010302.081139
Reference
  Authors
Negishi M, Oinuma I, Katoh H.
  Title
Plexins: axon guidance and signal transduction.
  Journal
Cell Mol Life Sci 62:1363-71 (2005)
DOI:10.1007/s00018-005-5018-2
Reference
  Authors
Huot J.
  Title
Ephrin signaling in axon guidance.
  Journal
Prog Neuropsychopharmacol Biol Psychiatry 28:813-8 (2004)
DOI:10.1016/j.pnpbp.2004.05.025
Reference
  Authors
Patel BN, Van Vactor DL.
  Title
Axon guidance: the cytoplasmic tail.
  Journal
Curr Opin Cell Biol 14:221-9 (2002)
DOI:10.1016/S0955-0674(02)00308-3
Reference
  Authors
Yu TW, Bargmann CI.
  Title
Dynamic regulation of axon guidance.
  Journal
Nat Neurosci 4 Suppl:1169-76 (2001)
DOI:10.1038/nn748
Reference
  Authors
Dickson BJ.
  Title
Molecular mechanisms of axon guidance.
  Journal
Science 298:1959-64 (2002)
DOI:10.1126/science.1072165
Reference
  Authors
Barallobre MJ, Pascual M, Del Rio JA, Soriano E.
  Title
The Netrin family of guidance factors: emphasis on Netrin-1 signalling.
  Journal
Brain Res Brain Res Rev 49:22-47 (2005)
DOI:10.1016/j.brainresrev.2004.11.003
Reference
  Authors
Sabatier C, Plump AS, Le Ma, Brose K, Tamada A, Murakami F, Lee EY, Tessier-Lavigne M.
  Title
The divergent Robo family protein rig-1/Robo3 is a negative regulator of slit responsiveness required for midline crossing by commissural axons.
  Journal
Cell 117:157-69 (2004)
DOI:10.1016/S0092-8674(04)00303-4
Reference
  Authors
Fujita Y, Yamashita T
  Title
Axon growth inhibition by RhoA/ROCK in the central nervous system.
  Journal
Front Neurosci 8:338 (2014)
DOI:10.3389/fnins.2014.00338
Reference
  Authors
Yamashita T, Mueller BK, Hata K
  Title
Neogenin and repulsive guidance molecule signaling in the central nervous system.
  Journal
Curr Opin Neurobiol 17:29-34 (2007)
DOI:10.1016/j.conb.2006.12.001
Reference
  Authors
van Erp S, van den Heuvel DMA, Fujita Y, Robinson RA, Hellemons AJCGM, Adolfs Y, Van Battum EY, Blokhuis AM, Kuijpers M, Demmers JAA, Hedman H, Hoogenraad CC, Siebold C, Yamashita T, Pasterkamp RJ
  Title
Lrig2 Negatively Regulates Ectodomain Shedding of Axon Guidance Receptors by ADAM Proteases.
  Journal
Dev Cell 35:537-552 (2015)
DOI:10.1016/j.devcel.2015.11.008
Related
pathway
shon04010  MAPK signaling pathway
shon04060  Cytokine-cytokine receptor interaction
shon04310  Wnt signaling pathway
shon04810  Regulation of actin cytoskeleton
KO pathway
ko04360   
LinkDB

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