GFIT result for
abry
|
GFIT result for
abry
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| abry:NYE86_06175 (201 a.a.) |
-- |
RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > cai:Caci_2526(198) | 165 | 70.3 | 743 | 26 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > kut:JJ691_47140(187) | 158 | 63.9 | 621 | 14 | <- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amd:AMED_3760(193) | 160 | 61.3 | 609 | 21 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 160 | 61.3 | 609 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 160 | 61.3 | 609 | 21 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 160 | 61.3 | 609 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > agra:AGRA3207_007836(197) | 159 | 63.5 | 607 | 30 | <- | RNA polymerase sigma factor | |||
| > aprt:MUY14_29390(193) | 165 | 59.4 | 599 | 15 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > amyc:CU254_17200(193) | 160 | 60.6 | 598 | 14 | <- | RNA polymerase subunit sigma | |||
| > msak:MSAS_45680(179) | 165 | 58.2 | 598 | 5 | <- | putative RNA polymerase sigma factor | |||
| > pfla:Pflav_031030(196) | 160 | 60.0 | 597 | 38 | <- | rpoE_13; RNA polymerase sigma24 factor | |||
| > maub:MAUB_11840(185) | 167 | 55.7 | 588 | 6 | <- | putative RNA polymerase sigma factor | |||
| > fal:FRAAL4137(171) | 159 | 60.4 | 587 | 5 | <- | putative ECF sub-family Sigma-70 factor | |||
| > mdx:BTO20_26575(178) | 172 | 54.1 | 584 | 6 | <- | RNA polymerase subunit sigma | |||
| > mseo:MSEO_49050(182) | 169 | 55.6 | 582 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 165 | 55.8 | 581 | 4 | <- | RNA polymerase sigma factor | |||
| > fri:FraEuI1c_2645(203) | 167 | 58.7 | 580 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mcoo:MCOO_42530(167) | 162 | 56.8 | 580 | 2 | <- | putative RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 161 | 56.5 | 579 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 172 | 55.8 | 576 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 172 | 55.8 | 576 | 4 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mavi:RC58_21570(179) | 172 | 55.8 | 576 | 5 | <- | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 172 | 55.8 | 576 | 5 | <- | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 172 | 55.8 | 576 | 5 | <- | hypothetical protein | |||
| > msto:MSTO_28290(183) | 167 | 56.9 | 576 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mshg:MSG_00969(182) | 160 | 56.2 | 575 | 4 | <- | putative RNA polymerase sigma factor | |||
| > ksl:OG809_22635(?) | 164 | 56.7 | 574 | 0 | -- | - | |||
| > mnv:MNVI_26030(179) | 157 | 56.7 | 574 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 166 | 56.6 | 573 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 167 | 54.5 | 569 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 165 | 55.2 | 569 | 5 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 161 | 59.0 | 568 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mmat:MMAGJ_46560(188) | 162 | 56.2 | 568 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mpsc:MPSYJ_10150(168) | 165 | 55.8 | 566 | 5 | <- | putative RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 160 | 58.1 | 564 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mpae:K0O64_03790(179) | 160 | 57.5 | 563 | 3 | <- | RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 167 | 53.3 | 562 | 4 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 165 | 53.3 | 562 | 4 | <- | RNA polymerase subunit sigma | |||
| > mphu:MPHO_00980(181) | 167 | 53.3 | 562 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mchi:AN480_22500(183) | 163 | 56.4 | 561 | 4 | <- | RNA polymerase subunit sigma | |||
| > mman:MMAN_31190(183) | 163 | 56.4 | 560 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mcro:MI149_04390(179) | 160 | 56.9 | 559 | 3 | <- | RNA polymerase sigma factor | |||
| > mir:OCQ_44170(183) | 163 | 56.4 | 557 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mrf:MJO55_27030(184) | 164 | 56.1 | 557 | 7 | <- | RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 159 | 56.6 | 557 | 2 | <- | RNA polymerase sigma factor | |||
| > mmm:W7S_21510(183) | 161 | 56.5 | 556 | 3 | <- | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 161 | 56.5 | 556 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > dvc:Dvina_28740(167) | 161 | 55.3 | 555 | 43 | <- | RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 161 | 55.3 | 554 | 33 | <- | RNA polymerase sigma factor | |||
| > mhev:MHEL_14370(179) | 159 | 56.0 | 554 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 167 | 52.7 | 552 | 3 | -- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > msim:MSIM_15410(187) | 168 | 53.0 | 551 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 166 | 53.0 | 549 | 2 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > nah:F5544_08000(204) | 160 | 53.1 | 542 | 8 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > miz:BAB75_26190(184) | 162 | 54.3 | 540 | 3 | <- | RNA polymerase subunit sigma | |||
| > mll:B1R94_04110(180) | 160 | 53.7 | 540 | 5 | <- | RNA polymerase subunit sigma | |||
| > mab:MAB_4652(185) | 160 | 55.0 | 536 | 3 | <- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mrh:MycrhN_1984(183) | 162 | 53.1 | 536 | 3 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > msa:Mycsm_06152(165) | 162 | 54.3 | 535 | 5 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > nyu:D7D52_36470(?) | 160 | 52.5 | 535 | 0 | -- | - | |||
| > msal:DSM43276_04475(184) | 160 | 52.5 | 527 | 5 | <- | sigX; RNA polymerase sigma factor SigX | |||
| > msao:MYCSP_21660(184) | 162 | 54.3 | 525 | 5 | <- | RNA polymerase sigma factor | |||
| > mabl:MMASJCM_4707(185) | 160 | 53.7 | 522 | 1 | <- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 160 | 53.7 | 522 | 1 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mste:MSTE_04816(184) | 160 | 51.9 | 515 | 4 | <- | putative RNA polymerase sigma factor | |||
| > nsr:NS506_06042(190) | 157 | 53.5 | 513 | 4 | <- | hypothetical protein | |||
| > mia:OCU_42820(153) | 155 | 55.5 | 511 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 155 | 55.5 | 511 | 2 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mit:OCO_43050(153) | 155 | 55.5 | 511 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmor:MMOR_08160(165) | 162 | 51.2 | 509 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mkn:MKAN_19960(157) | 148 | 49.3 | 456 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > kbs:EPA93_28450(202) | 164 | 36.6 | 360 | 42 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 160 | 31.2 | 306 | 0 | -- | - | |||
| > mmar:MODMU_4999(210) | 163 | 35.6 | 270 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > blap:MVA48_18610(247) | 155 | 32.3 | 262 | 35 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > ssyi:EKG83_44655(214) | 159 | 33.3 | 256 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amq:AMETH_0444(215) | 163 | 31.9 | 255 | 27 | -- | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cati:CS0771_08550(308) | 156 | 35.3 | 255 | 49 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > meno:Jiend_34730(315) | 158 | 36.1 | 255 | 96 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plab:C6361_11750(291) | 158 | 36.1 | 253 | 141 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 158 | 36.1 | 253 | 140 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plk:CIK06_26090(287) | 158 | 36.1 | 253 | 92 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mau:Micau_5649(323) | 158 | 36.1 | 252 | 126 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcab:HXZ27_28245(322) | 158 | 36.1 | 252 | 237 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mchl:PVK74_18390(323) | 158 | 36.1 | 252 | 120 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcra:ID554_18470(314) | 158 | 36.1 | 252 | 56 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 158 | 36.1 | 252 | 0 | -- | - | |||
| > mhaw:RMN56_14605(?) | 158 | 36.1 | 252 | 0 | -- | - | |||
| > micb:MicB006_4659(323) | 158 | 36.1 | 252 | 118 | -- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mprn:Q3V37_09750(?) | 158 | 36.1 | 252 | 0 | -- | - | |||
| > mtem:GCE86_22810(326) | 158 | 36.1 | 252 | 133 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mtua:CSH63_29090(327) | 158 | 36.1 | 252 | 149 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ver:HUT12_28910(314) | 158 | 36.1 | 252 | 69 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > vma:VAB18032_01790(315) | 158 | 36.1 | 252 | 68 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actl:L3i22_101990(317) | 155 | 36.1 | 251 | 65 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acts:ACWT_7737(314) | 155 | 36.1 | 251 | 46 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aih:Aiant_37260(314) | 155 | 36.1 | 251 | 51 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ams:AMIS_75870(314) | 155 | 36.1 | 251 | 57 | -- | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aou:ACTOB_008204(?) | 155 | 36.1 | 251 | 0 | -- | - | |||
| > ase:ACPL_7868(314) | 155 | 36.1 | 251 | 47 | -- | K03088 | rpoE | adsA; RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |