KEGG   PATHWAY: cery04620
Entry
cery04620                   Pathway                                
Name
Toll-like receptor signaling pathway - Chanodichthys erythropterus (predatory carp)
Description
Specific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors identified as homologs of Toll in Drosophila. Mammalian TLRs are expressed on innate immune cells, such as macrophages and dendritic cells, and respond to the membrane components of Gram-positive or Gram-negative bacteria. Pathogen recognition by TLRs provokes rapid activation of innate immunity by inducing production of proinflammatory cytokines and upregulation of costimulatory molecules. TLR signaling pathways are separated into two groups: a MyD88-dependent pathway that leads to the production of proinflammatory cytokines with quick activation of NF-{kappa}B and MAPK, and a MyD88-independent pathway associated with the induction of IFN-beta and IFN-inducible genes, and maturation of dendritic cells with slow activation of NF-{kappa}B and MAPK.
Class
Organismal Systems; Immune system
Pathway map
cery04620  Toll-like receptor signaling pathway
cery04620

Organism
Chanodichthys erythropterus (predatory carp) [GN:cery]
Gene
137002101  il6; interleukin-6 [KO:K05405]
137002995  map2k2b; dual specificity mitogen-activated protein kinase kinase 2b [KO:K04369] [EC:2.7.12.2]
137003113  pik3r2; phosphatidylinositol 3-kinase regulatory subunit beta isoform X1 [KO:K02649]
137003214  ripk1l; receptor-interacting serine/threonine-protein kinase 1 isoform X1 [KO:K02861] [EC:2.7.11.1]
137003529  [KO:K11217] [EC:2.7.10.2]
137003712  zmp:0000001127; interleukin-12 subunit alpha [KO:K05406]
137004124  pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922] [EC:2.7.1.153]
137004468  il12a; interleukin-12 subunit alpha [KO:K05406]
137006187  nfkbiab; nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [KO:K04734]
137006239  traf3; TNF receptor-associated factor 3 [KO:K03174]
137006461  akt1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
137006970  fosaa; protein c-Fos [KO:K04379]
137007393  rac1a; ras-related C3 botulinum toxin substrate 1 [KO:K04392]
137007492  map2k6; dual specificity mitogen-activated protein kinase kinase 6 isoform X1 [KO:K04433] [EC:2.7.12.2]
137007791  irf9; interferon regulatory factor 9 isoform X1 [KO:K04693]
137007833  map2k4b; dual specificity mitogen-activated protein kinase kinase 4b isoform X1 [KO:K04430] [EC:2.7.12.2]
137007874  irf3; interferon regulatory factor 3 isoform X1 [KO:K05411]
137008125  map3k8; mitogen-activated protein kinase kinase kinase 8 [KO:K04415] [EC:2.7.11.25]
137008268  mapk8b; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
137008719  pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
137009461  cd40; tumor necrosis factor receptor superfamily member 5 isoform X1 [KO:K03160]
137009531  ikbkg; NF-kappa-B essential modulator [KO:K07210]
137009787  zgc:158659; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
137009875  zgc:171775; STKc_p38 domain-containing protein [KO:K04441] [EC:2.7.11.24]
137010665  ifnphi1; interferon phi 1 isoform X1 [KO:K05414]
137010678  ifnphi3; interferon phi 3 [KO:K05414]
137011077  [KO:K04398] [EC:3.4.22.61]
137011206  casp8; caspase-8 isoform X1 [KO:K04398] [EC:3.4.22.61]
137011268  casp8l1; caspase 8, apoptosis-related cysteine peptidase, like 1 [KO:K04398] [EC:3.4.22.61]
137011430  tab1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1 [KO:K04403]
137011655  jak1; tyrosine-protein kinase JAK1 [KO:K11217] [EC:2.7.10.2]
137011712  stat2; signal transducer and activator of transcription 2 [KO:K11221]
137011727  pik3r3b; phosphoinositide-3-kinase, regulatory subunit 3b (gamma) isoform X1 [KO:K02649]
137012088  mapk9; mitogen-activated protein kinase 9 [KO:K04440] [EC:2.7.11.24]
137012171  mapk10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
137013841  myd88; myeloid differentiation primary response protein MyD88 [KO:K04729]
137013992  il12ba; interleukin 12Ba [KO:K05425]
137014493  irf7; interferon regulatory factor 7 [KO:K09447]
137015448  irak4; interleukin-1 receptor-associated kinase 4 [KO:K04733] [EC:2.7.11.1]
137015510  [KO:K12499]
137017221  map2k4a; dual specificity mitogen-activated protein kinase kinase 4a isoform X1 [KO:K04430] [EC:2.7.12.2]
137017505  mapk3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
137017831  tyk2; non-receptor tyrosine-protein kinase TYK2 [KO:K11219] [EC:2.7.10.2]
137017996  rac1b; ras-related C3 botulinum toxin substrate 1b isoform X1 [KO:K04392]
137018700  [KO:K04456] [EC:2.7.11.1]
137018733  nfkbiaa; nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [KO:K04734]
137018920  map3k7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
137018980  tlr1; toll-like receptor 1 [KO:K05398]
137019192  fosab; v-fos FBJ murine osteosarcoma viral oncogene homolog Ab [KO:K04379]
137019193  si:ch211-153j24.3; protein c-Fos [KO:K04379]
137019233  [KO:K10168]
137019235  [KO:K10168]
137019377  jun; transcription factor AP-1 [KO:K04448]
137019429  tab2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404]
137019969  [KO:K10160]
137020384  tlr4bb; toll-like receptor 4b, duplicate b isoform X1 [KO:K10160]
137020385  [KO:K10160]
137020466  akt3a; RAC-gamma serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
137020554  chuk; inhibitor of nuclear factor kappa-B kinase subunit alpha [KO:K04467] [EC:2.7.11.10]
137020633  [KO:K05416]
137020639  mapk8a; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
137021461  pik3ca; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
137021579  ikbke; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
137021750  mapk14b; mitogen-activated protein kinase 14B isoform X1 [KO:K04441] [EC:2.7.11.24]
137022777  mapk12a; mitogen-activated protein kinase 12 [KO:K04441] [EC:2.7.11.24]
137023028  nfkb1; nuclear factor NF-kappa-B p105 subunit [KO:K02580]
137023050  tirap; toll/interleukin-1 receptor domain-containing adapter protein [KO:K05403]
137023110  akt2; RAC-beta serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
137023351  map2k1; dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
137024126  tbk1; serine/threonine-protein kinase TBK1 isoform X1 [KO:K05410] [EC:2.7.11.10]
137024298  mapk11; mitogen-activated protein kinase 11 isoform X1 [KO:K04441] [EC:2.7.11.24]
137024299  mapk12b; mitogen-activated protein kinase 12b isoform X1 [KO:K04441] [EC:2.7.11.24]
137024362  [KO:K10169]
137024383  irf5; interferon regulatory factor 5 [KO:K09446]
137026704  tlr9; toll-like receptor 9 [KO:K10161]
137026791  ikbkb; inhibitor of nuclear factor kappa-B kinase subunit beta [KO:K07209] [EC:2.7.11.10]
137026848  irak1; interleukin-1 receptor-associated kinase 1 [KO:K04730] [EC:2.7.11.1]
137026877  mapk13; mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
137027121  mapk14a; mitogen-activated protein kinase 14A isoform X1 [KO:K04441] [EC:2.7.11.24]
137027661  stat1a; signal transducer and activator of transcription 1a isoform X1 [KO:K11220]
137028067  ticam1; TIR domain-containing adapter molecule 1 [KO:K05842]
137028469  akt2l; v-akt murine thymoma viral oncogene homolog 2, like [KO:K04456] [EC:2.7.11.1]
137028548  [KO:K04519]
137029156  map2k2a; dual specificity mitogen-activated protein kinase kinase 2a [KO:K04369] [EC:2.7.12.2]
137029421  [KO:K04519]
137029422  [KO:K04519]
137029423  [KO:K04519]
137029424  [KO:K04519]
137029435  tlr8b; toll-like receptor 8b [KO:K10170]
137029882  cxcl8b.3; interleukin-8b.3 [KO:K10030]
137030077  fadd; protein FADD [KO:K02373]
137030508  rela; transcription factor p65 [KO:K04735]
137030654  cxcl19; C-X-C motif chemokine 19 [KO:K10030]
137030837  tollip; toll-interacting protein isoform X1 [KO:K05402]
137031225  traf6; TNF receptor-associated factor 6 isoform X1 [KO:K03175] [EC:2.3.2.27]
137031545  akt3b; RAC-gamma serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
137031750  tlr3; toll-like receptor 3 [KO:K05401]
137031976  map2k7; dual specificity mitogen-activated protein kinase kinase 7 isoform X1 [KO:K04431] [EC:2.7.12.2]
137032155  cxcl8a; interleukin-8 [KO:K10030]
137032534  tlr2; toll-like receptor 2 [KO:K10159]
137033586  mapk1; mitogen-activated protein kinase 1 isoform X1 [KO:K04371] [EC:2.7.11.24]
137034431  ctsk; cathepsin K [KO:K01371] [EC:3.4.22.38]
137034439  tlr18; toll-like receptor 18 [KO:K10159]
137034610  june; junE proto-oncogene, AP-1 transcription factor subunit [KO:K04448]
137034684  [KO:K12672]
137034708  [KO:K12672]
137034718  [KO:K12672]
137034723  [KO:K12672]
137034724  [KO:K12672]
137034802  [KO:K12672]
137034836  [KO:K12672]
137034980  casp22; LOW QUALITY PROTEIN: caspase-22 [KO:K04398] [EC:3.4.22.61]
137035000  [KO:K12672]
137035124  pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
137035347  tlr7; toll-like receptor 7 [KO:K05404]
137035348  [KO:K10170]
137035360  casp10; caspase-8 isoform X1 [KO:K04398] [EC:3.4.22.61]
137035519  crfb2; cytokine receptor family member b2 isoform X1 [KO:K05131]
137036092  [KO:K05399]
137036093  [KO:K05399]
137037220  tnfa; tumor necrosis factor a (TNF superfamily, member 2) [KO:K03156]
Reference
  Authors
Kawai T, Akira S.
  Title
TLR signaling.
  Journal
Semin Immunol 19:24-32 (2007)
DOI:10.1016/j.smim.2006.12.004
Reference
  Authors
O'Neill LA, Bowie AG.
  Title
The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling.
  Journal
Nat Rev Immunol 7:353-64 (2007)
DOI:10.1038/nri2079
Reference
  Authors
Honda K, Taniguchi T.
  Title
IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors.
  Journal
Nat Rev Immunol 6:644-58 (2006)
DOI:10.1038/nri1900
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and Type I interferons.
  Journal
J Biol Chem 282:15319-23 (2007)
DOI:10.1074/jbc.R700009200
Reference
  Authors
Akira S, Uematsu S, Takeuchi O.
  Title
Pathogen recognition and innate immunity.
  Journal
Cell 124:783-801 (2006)
DOI:10.1016/j.cell.2006.02.015
Reference
  Authors
Yamamoto M, Takeda K, Akira S.
  Title
TIR domain-containing adaptors define the specificity of TLR signaling.
  Journal
Mol Immunol 40:861-8 (2004)
DOI:10.1016/j.molimm.2003.10.006
Reference
  Authors
Means TK, Hayashi F, Smith KD, Aderem A, Luster AD.
  Title
The Toll-like receptor 5 stimulus bacterial flagellin induces maturation and chemokine production in human dendritic cells.
  Journal
J Immunol 170:5165-75 (2003)
DOI:10.4049/jimmunol.170.10.5165
Reference
  Authors
Aderem A, Smith KD.
  Title
A systems approach to dissecting immunity and inflammation.
  Journal
Semin Immunol 16:55-67 (2004)
DOI:10.1016/j.smim.2003.10.002
Reference
  Authors
Banerjee A, Gerondakis S.
  Title
Coordinating TLR-activated signaling pathways in cells of the immune system.
  Journal
Immunol Cell Biol 85:420-4 (2007)
DOI:10.1038/sj.icb.7100098
Reference
  Authors
Loniewski KJ, Patial S, Parameswaran N.
  Title
Sensitivity of TLR4- and -7-induced NF kappa B1 p105-TPL2-ERK pathway to TNF-receptor-associated-factor-6 revealed by RNAi in mouse macrophages.
  Journal
Mol Immunol 44:3715-23 (2007)
DOI:10.1016/j.molimm.2007.04.002
Reference
  Authors
Arbibe L, Mira JP, Teusch N, Kline L, Guha M, Mackman N, Godowski PJ, Ulevitch RJ, Knaus UG.
  Title
Toll-like receptor 2-mediated NF-kappa B activation requires a Rac1-dependent pathway.
  Journal
Nat Immunol 1:533-40 (2000)
DOI:10.1038/82797
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and innate immunity.
  Journal
J Mol Med 84:712-25 (2006)
DOI:10.1007/s00109-006-0084-y
Related
pathway
cery04010  MAPK signaling pathway
cery04060  Cytokine-cytokine receptor interaction
cery04120  Ubiquitin mediated proteolysis
cery04210  Apoptosis
KO pathway
ko04620   

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