Entry
Name
Endocytosis - Eptesicus fuscus (big brown bat)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Other DBs
Organism
Eptesicus fuscus (big brown bat) [GN:
efus ]
Gene
103283178 ASAP2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
103283217 AGAP1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X3 [KO:K12491 ]
103283323 METTL8; tRNA N(3)-methylcytidine methyltransferase METTL8, mitochondrial isoform X1 [KO:K05070 ]
103283524 STAM2; signal transducing adapter molecule 2 isoform X1 [KO:K04705 ]
103284094 DNAJC6; putative tyrosine-protein phosphatase auxilin [KO:K09526 ]
103284205 EPS15; epidermal growth factor receptor substrate 15 isoform X1 [KO:K12472 ]
103284587 PARD6A; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
103284621 VPS4A; vacuolar protein sorting-associated protein 4A isoform X1 [KO:K12196 ]
103284840 SMAP1; stromal membrane-associated protein 1 isoform X1 [KO:K12486 ]
103284895 ARAP2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 [KO:K18440 ]
103285630 ARAP3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 [KO:K12490 ]
103285746 PARD6B; partitioning defective 6 homolog beta isoform X1 [KO:K06093 ]
103285957 ARPC1A; actin-related protein 2/3 complex subunit 1A isoform X2 [KO:K05757 ]
103286040 VPS37D; vacuolar protein sorting-associated protein 37D [KO:K12185 ]
103286084 PSD2; PH and SEC7 domain-containing protein 2 isoform X1 [KO:K12494 ]
103286480 CHMP5; charged multivesicular body protein 5 isoform X1 [KO:K12198 ]
103286909 VPS26B; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
103287040 ARPC3; actin-related protein 2/3 complex subunit 3 isoform X2 [KO:K05756 ]
103287044 VPS29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
103287219 VPS37B; vacuolar protein sorting-associated protein 37B [KO:K12185 ]
103288296 PSD3; PH and SEC7 domain-containing protein 3 isoform X1 [KO:K12494 ]
103288510 GBF1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 [KO:K18443 ]
103288593 RAB11FIP2; rab11 family-interacting protein 2 isoform X2 [KO:K12484 ]
103289324 ARPC2; actin-related protein 2/3 complex subunit 2 isoform X1 [KO:K05758 ]
103289511 VPS26A; vacuolar protein sorting-associated protein 26A isoform X1 [KO:K18466 ]
103290265 RAB11FIP1; rab11 family-interacting protein 1 isoform X2 [KO:K12484 ]
103290309 VPS37A; vacuolar protein sorting-associated protein 37A [KO:K12185 ]
103290839 ARFGAP2; ADP-ribosylation factor GTPase-activating protein 2 isoform X1 [KO:K12493 ]
103291190 CAPZA1; F-actin-capping protein subunit alpha-1 isoform X1 [KO:K10364 ]
103291932 LDLRAP1; low density lipoprotein receptor adapter protein 1 [KO:K12474 ]
103291958 ASAP3; LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 [KO:K12488 ]
103291971 CDC42; cell division control protein 42 homolog isoform X1 [KO:K04393 ]
103291994 CAPZB; F-actin-capping protein subunit beta isoform X2 [KO:K10365 ]
103292477 AGAP2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
103292590 STAM; signal transducing adapter molecule 1 isoform X1 [KO:K04705 ]
103292727 TSG101; tumor susceptibility gene 101 protein isoform X1 [KO:K12183 ]
103293077 VPS25; vacuolar protein-sorting-associated protein 25 [KO:K12189 ]
103293572 ARAP1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 [KO:K18439 ]
103293960 ARFGEF1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1 [KO:K18442 ]
103294777 SMAP2; stromal membrane-associated protein 2 isoform X1 [KO:K12486 ]
103295064 CHMP7; charged multivesicular body protein 7 isoform X1 [KO:K15053 ]
103295184 ACAP2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X2 [KO:K12489 ]
103295262 ACAP3; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 [KO:K12489 ]
103295429 ARPC4; actin-related protein 2/3 complex subunit 4 isoform X1 [KO:K05755 ]
103295611 VPS36; vacuolar protein-sorting-associated protein 36 isoform X4 [KO:K12190 ]
103295908 VPS35; vacuolar protein sorting-associated protein 35 [KO:K18468 ]
103295952 CAPZA2; F-actin-capping protein subunit alpha-2 isoform X1 [KO:K10364 ]
103296693 CHMP2B; charged multivesicular body protein 2b isoform X1 [KO:K12192 ]
103296920 ACAP1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12489 ]
103297325 PDCD6IP; programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
103297419 IQSEC1; IQ motif and SEC7 domain-containing protein 1 isoform X1 [KO:K12495 ]
103297813 SH3KBP1; SH3 domain-containing kinase-binding protein 1 [KO:K12470 ]
103297953 IGF2R; cation-independent mannose-6-phosphate receptor isoform X1 [KO:K06564 ]
103298231 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
103298511 ARPC5L; actin-related protein 2/3 complex subunit 5-like protein isoform X1 [KO:K05754 ]
103298623 ARFGAP3; ADP-ribosylation factor GTPase-activating protein 3 isoform X1 [KO:K12493 ]
103298959 VPS45; vacuolar protein sorting-associated protein 45 [KO:K12479 ]
103299055 CHMP3; charged multivesicular body protein 3 isoform X1 [KO:K12193 ]
103299865 RABEP1; rab GTPase-binding effector protein 1 isoform X1 [KO:K12480 ]
103300289 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [KO:K12492 ]
103300893 EPS15L1; epidermal growth factor receptor substrate 15-like 1 [KO:K12472 ]
103301164 LDLR; LOW QUALITY PROTEIN: low-density lipoprotein receptor [KO:K12473 ]
103301226 BIN1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
103301350 IQSEC2; IQ motif and SEC7 domain-containing protein 2 isoform X3 [KO:K12495 ]
103301482 CHMP4A; charged multivesicular body protein 4a isoform X1 [KO:K12194 ]
103301668 RUFY1; RUN and FYVE domain-containing protein 1 isoform X1 [KO:K12482 ]
103301755 AGAP3; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X5 [KO:K12491 ]
103302169 ARFGEF2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 [KO:K18442 ]
103302410 ASAP1; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12488 ]
103302555 VPS37C; vacuolar protein sorting-associated protein 37C isoform X1 [KO:K12185 ]
103302688 VPS28; vacuolar protein sorting-associated protein 28 homolog [KO:K12184 ]
103303658 IQSEC3; IQ motif and SEC7 domain-containing protein 3 [KO:K12495 ]
103303710 VPS4B; vacuolar protein sorting-associated protein 4B isoform X1 [KO:K12196 ]
103305127 VTA1; vacuolar protein sorting-associated protein VTA1 homolog isoform X1 [KO:K12199 ]
103305231 ZFYVE16; zinc finger FYVE domain-containing protein 16 [KO:K04679 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
efus04060 Cytokine-cytokine receptor interaction
efus04070 Phosphatidylinositol signaling system
efus04130 SNARE interactions in vesicular transport
KO pathway