KEGG   PATHWAY: mpuf04623
Entry
mpuf04623                   Pathway                                
Name
Cytosolic DNA-sensing pathway - Mustela putorius furo (domestic ferret)
Description
Specific families of pattern recognition receptors are responsible for detecting foreign DNA from invading microbes or host cells and generating innate immune responses. DAI is the first identified sensor of cytosolic DNA which activates the IRF and NF-{kappa}B transcription factors, leading to production of type I interferon and other cytokines. The second type of cytoplasmic DNA sensor is AIM2. Upon sensing DNA, AIM2 triggers the assembly of the inflammasome, culminating in interleukin maturation. In addition to these receptors, there is a mechanism to sense foreign DNA, with the host RNA polymerase III converting the DNA into RNA for recognition by the RNA sensor RIG-I. These pathways provide various means to alert the cell.
Class
Organismal Systems; Immune system
Pathway map
mpuf04623  Cytosolic DNA-sensing pathway
mpuf04623

Organism
Mustela putorius furo (domestic ferret) [GN:mpuf]
Gene
101669908  [KO:K20914]
101670212  IL18; interleukin-18 [KO:K05482]
101671465  IL6; interleukin-6 [KO:K05405]
101671648  IKBKG; NF-kappa-B essential modulator [KO:K07210]
101671751  IRF7; interferon regulatory factor 7 [KO:K09447]
101671860  FADD; FAS-associated death domain protein [KO:K02373]
101672437  GSDMD; gasdermin-D [KO:K20917]
101672464  TREX1; three-prime repair exonuclease 1 [KO:K10790] [EC:3.1.11.2]
101672794  [KO:K12799]
101673445  ZDHHC1; probable palmitoyltransferase ZDHHC1 isoform X2 [KO:K20027] [EC:2.3.1.225]
101673914  SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1 [KO:K22544] [EC:3.1.5.-]
101673990  PCBP1; poly(rC)-binding protein 1 [KO:K12889]
101674197  CCL5; C-C motif chemokine 5 [KO:K12499]
101674366  POLR3B; DNA-directed RNA polymerase III subunit RPC2 [KO:K03021] [EC:2.7.7.6]
101674940  [KO:K05414]
101675101  RIPK3; receptor-interacting serine/threonine-protein kinase 3 isoform X1 [KO:K08847] [EC:2.7.11.1]
101675243  [KO:K05414]
101675332  ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 [KO:K12968] [EC:3.5.4.37]
101675758  [KO:K05414]
101676141  [KO:K12889]
101676633  [KO:K05414]
101676770  CCL4; C-C motif chemokine 4 [KO:K12964]
101676992  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
101677422  [KO:K05414]
101677897  POLR3D; DNA-directed RNA polymerase III subunit RPC4 [KO:K03026]
101678102  CASP8; caspase-8 [KO:K04398] [EC:3.4.22.61]
101678184  [KO:K05414]
101678496  [KO:K05414]
101678669  POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1 [KO:K03013]
101678795  [KO:K05414]
101678832  DNASE2; deoxyribonuclease-2-alpha [KO:K01158] [EC:3.1.22.1]
101678912  POLR3A; DNA-directed RNA polymerase III subunit RPC1 [KO:K03018] [EC:2.7.7.6]
101679100  IFNB1; interferon beta [KO:K05415]
101679960  NFKBIB; NF-kappa-B inhibitor beta isoform X1 [KO:K02581]
101680084  IL33; interleukin-33 isoform X1 [KO:K12967]
101680239  RELA; transcription factor p65 [KO:K04735]
101680542  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
101680658  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
101681129  POLR3H; DNA-directed RNA polymerase III subunit RPC8 [KO:K03022]
101681780  MAVS; mitochondrial antiviral-signaling protein isoform X1 [KO:K12648]
101682791  POLR3C; DNA-directed RNA polymerase III subunit RPC3 isoform X1 [KO:K03023]
101683072  NLRP3; NACHT, LRR and PYD domains-containing protein 3 isoform X2 [KO:K12800]
101683200  [KO:K05414]
101683818  CASP7; caspase-7 [KO:K04397] [EC:3.4.22.60]
101684074  [KO:K05414]
101684197  POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 [KO:K03016]
101684365  [KO:K05414]
101684645  [KO:K05414]
101684957  POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2 [KO:K03014]
101685502  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
101685546  [KO:K05414]
101685567  DFNA5; non-syndromic hearing impairment protein 5 [KO:K22146]
101685713  POLR3G; DNA-directed RNA polymerase III subunit RPC7 [KO:K03024]
101685789  POLR3F; DNA-directed RNA polymerase III subunit RPC6 [KO:K03025]
101686116  [KO:K05414]
101686932  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
101687826  ZBP1; Z-DNA-binding protein 1 isoform X3 [KO:K12965]
101687874  MB21D1; cyclic GMP-AMP synthase [KO:K17834] [EC:2.7.7.86]
101688006  IL1B; interleukin-1 beta [KO:K04519]
101688086  POLR3GL; DNA-directed RNA polymerase III subunit RPC7-like [KO:K03024]
101688343  ZCCHC3; zinc finger CCHC domain-containing protein 3 [KO:K27162]
101689805  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
101690315  DDX58; probable ATP-dependent RNA helicase DDX58 isoform X1 [KO:K12646] [EC:3.6.4.13]
101690820  MEFV; pyrin [KO:K12803]
101690858  CASP3; caspase-3 [KO:K02187] [EC:3.4.22.56]
101691072  DDX41; probable ATP-dependent RNA helicase DDX41 [KO:K13116] [EC:3.6.4.13]
101691079  POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1 [KO:K03027]
101691280  TMEM173; stimulator of interferon genes protein isoform X1 [KO:K12654]
101691763  DNASE2B; deoxyribonuclease-2-beta isoform X2 [KO:K01158] [EC:3.1.22.1]
101692116  [KO:K20027] [EC:2.3.1.225]
101692350  POLR3E; DNA-directed RNA polymerase III subunit RPC5 [KO:K14721]
101692969  CXCL10; C-X-C motif chemokine 10 [KO:K12671]
101693423  IRF3; interferon regulatory factor 3 isoform X2 [KO:K05411]
101693485  G3BP1; ras GTPase-activating protein-binding protein 1 [KO:K17265] [EC:5.6.2.3 3.6.4.13]
101693829  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
106005612  POLR3K; DNA-directed RNA polymerase III subunit RPC10 [KO:K03019]
Compound
C00039  DNA
C20640  Cyclic GMP-AMP
Reference
  Authors
Yanai H, Savitsky D, Tamura T, Taniguchi T
  Title
Regulation of the cytosolic DNA-sensing system in innate immunity: a current view.
  Journal
Curr Opin Immunol 21:17-22 (2009)
DOI:10.1016/j.coi.2009.01.005
Reference
  Authors
Vilaysane A, Muruve DA
  Title
The innate immune response to DNA.
  Journal
Semin Immunol 21:208-14 (2009)
DOI:10.1016/j.smim.2009.05.006
Reference
  Authors
Takeshita F, Ishii KJ
  Title
Intracellular DNA sensors in immunity.
  Journal
Curr Opin Immunol 20:383-8 (2008)
DOI:10.1016/j.coi.2008.05.009
Reference
  Authors
Takaoka A, Shinohara S
  Title
DNA sensors in innate immune system.
  Journal
Uirusu 58:37-46 (2008)
DOI:10.2222/jsv.58.37
Reference
  Authors
Takaoka A, Taniguchi T
  Title
Cytosolic DNA recognition for triggering innate immune responses.
  Journal
Adv Drug Deliv Rev 60:847-57 (2008)
DOI:10.1016/j.addr.2007.12.002
Reference
  Authors
Kaiser WJ, Upton JW, Mocarski ES
  Title
Receptor-interacting protein homotypic interaction motif-dependent control of NF-kappa B activation via the DNA-dependent activator of IFN regulatory factors.
  Journal
J Immunol 181:6427-34 (2008)
DOI:10.4049/jimmunol.181.9.6427
Reference
  Authors
Rebsamen M, Heinz LX, Meylan E, Michallet MC, Schroder K, Hofmann K, Vazquez J, Benedict CA, Tschopp J
  Title
DAI/ZBP1 recruits RIP1 and RIP3 through RIP homotypic interaction motifs to activate NF-kappaB.
  Journal
EMBO Rep 10:916-22 (2009)
DOI:10.1038/embor.2009.109
Reference
  Authors
Wang Z, Choi MK, Ban T, Yanai H, Negishi H, Lu Y, Tamura T, Takaoka A, Nishikura K, Taniguchi T
  Title
Regulation of innate immune responses by DAI (DLM-1/ZBP1) and other DNA-sensing molecules.
  Journal
Proc Natl Acad Sci U S A 105:5477-82 (2008)
DOI:10.1073/pnas.0801295105
Reference
  Authors
Stetson DB, Ko JS, Heidmann T, Medzhitov R
  Title
Trex1 prevents cell-intrinsic initiation of autoimmunity.
  Journal
Cell 134:587-98 (2008)
DOI:10.1016/j.cell.2008.06.032
Reference
  Authors
Schroder K, Muruve DA, Tschopp J
  Title
Innate immunity: cytoplasmic DNA sensing by the AIM2 inflammasome.
  Journal
Curr Biol 19:R262-5 (2009)
DOI:10.1016/j.cub.2009.02.011
Reference
  Authors
Krieg AM
  Title
AIMing 2 detect foreign DNA.
  Journal
Sci Signal 2:pe39 (2009)
DOI:10.1126/scisignal.277pe39
Reference
  Authors
O'Neill LA
  Title
DNA makes RNA makes innate immunity.
  Journal
Cell 138:428-30 (2009)
DOI:10.1016/j.cell.2009.07.021
Reference
  Authors
Ishii KJ, Coban C, Kato H, Takahashi K, Torii Y, Takeshita F, Ludwig H, Sutter G, Suzuki K, Hemmi H, Sato S, Yamamoto M, Uematsu S, Kawai T, Takeuchi O, Akira S
  Title
A Toll-like receptor-independent antiviral response induced by double-stranded B-form DNA.
  Journal
Nat Immunol 7:40-8 (2006)
DOI:10.1038/ni1282
Reference
  Authors
Cao X
  Title
New DNA-sensing pathway feeds RIG-I with RNA.
  Journal
Nat Immunol 10:1049-51 (2009)
DOI:10.1038/ni1009-1049
Reference
  Authors
Sun L, Wu J, Du F, Chen X, Chen ZJ
  Title
Cyclic GMP-AMP synthase is a cytosolic DNA sensor that activates the type I interferon pathway.
  Journal
Science 339:786-91 (2013)
DOI:10.1126/science.1232458
Reference
  Authors
Gao M, He Y, Tang H, Chen X, Liu S, Tao Y
  Title
cGAS/STING: novel perspectives of the classic pathway.
  Journal
Mol Biomed 1:7 (2020)
DOI:10.1186/s43556-020-00006-z
Reference
  Authors
Benjamin P, Sudhakar S, D'Arco F, Lobel U, Carney O, Roux CJ, Boddaert N, Hemingway C, Eleftheriou D, Mankad K
  Title
Spectrum of Neuroradiologic Findings Associated with Monogenic Interferonopathies.
  Journal
AJNR Am J Neuroradiol 43:2-10 (2022)
DOI:10.3174/ajnr.A7362
Reference
  Authors
Place DE, Lee S, Kanneganti TD
  Title
PANoptosis in microbial infection.
  Journal
Curr Opin Microbiol 59:42-49 (2021)
DOI:10.1016/j.mib.2020.07.012
Reference
  Authors
Jiang W, Deng Z, Dai X, Zhao W
  Title
PANoptosis: A New Insight Into Oral Infectious Diseases.
  Journal
Front Immunol 12:789610 (2021)
DOI:10.3389/fimmu.2021.789610
Reference
  Authors
Wang Y, Kanneganti TD
  Title
From pyroptosis, apoptosis and necroptosis to PANoptosis: A mechanistic compendium of programmed cell death pathways.
  Journal
Comput Struct Biotechnol J 19:4641-4657 (2021)
DOI:10.1016/j.csbj.2021.07.038
Related
pathway
mpuf04064  NF-kappa B signaling pathway
mpuf04120  Ubiquitin mediated proteolysis
mpuf04210  Apoptosis
mpuf04217  Necroptosis
mpuf04621  NOD-like receptor signaling pathway
mpuf04622  RIG-I-like receptor signaling pathway
KO pathway
ko04623   

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