KEGG   PATHWAY: ccad04622
Entry
ccad04622                   Pathway                                
Name
RIG-I-like receptor signaling pathway - Cervus canadensis (wapiti)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
ccad04622  RIG-I-like receptor signaling pathway
ccad04622

Organism
Cervus canadensis (wapiti) [GN:ccad]
Gene
122452766  antiviral innate immune response receptor RIG-I-like [KO:K12646] [EC:5.6.2.6]
122453331  DDX58; antiviral innate immune response receptor RIG-I [KO:K12646] [EC:5.6.2.6]
122453719  IFIH1; interferon-induced helicase C domain-containing protein 1 [KO:K12647] [EC:5.6.2.6]
122447934  ZNFX1; NFX1-type zinc finger-containing protein 1 [KO:K27391]
122448857  MAVS; mitochondrial antiviral-signaling protein isoform X1 [KO:K12648]
122441734  DHX58; probable ATP-dependent RNA helicase DHX58 isoform X1 [KO:K12649] [EC:5.6.2.6]
122454978  TRAF3; TNF receptor-associated factor 3 isoform X1 [KO:K03174]
122453649  TANK; TRAF family member-associated NF-kappa-B activator isoform X1 [KO:K12650]
122425181  AZI2; 5-azacytidine-induced protein 2 isoform X1 [KO:K12651]
122442338  TBKBP1; TANK-binding kinase 1-binding protein 1 isoform X1 [KO:K12652]
122434540  IKBKG; NF-kappa-B essential modulator isoform X1 [KO:K07210]
122427358  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
122451810  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
122421010  IRF3; interferon regulatory factor 3 [KO:K05411]
122430585  IRF7; interferon regulatory factor 7 [KO:K09447]
122452950  LOW QUALITY PROTEIN: interferon alpha-3-like [KO:K05414]
122453310  interferon alpha-1-like [KO:K05414]
122453141  interferon alpha-1-like [KO:K05414]
122452999  interferon alpha-1-like [KO:K05414]
122453000  interferon alpha-1-like [KO:K05414]
122453001  interferon alpha-1 [KO:K05414]
122452998  interferon alpha-1-like [KO:K05414]
122453350  interferon alpha-1-like [KO:K05414]
122453394  interferon beta-2-like [KO:K05415]
122453400  interferon beta-2-like [KO:K05415]
122453398  interferon beta-2 [KO:K05415]
122453396  interferon beta-2-like [KO:K05415]
122453397  interferon beta-2-like [KO:K05415]
122453395  interferon beta-2-like [KO:K05415]
122452949  interferon tau-like [KO:K05440]
122453402  interferon omega-1-like [KO:K05440]
122453343  interferon omega-1-like [KO:K05440]
122453342  interferon omega-1-like [KO:K05440]
122453309  interferon omega-1-like [KO:K05440]
122452955  interferon omega-1-like [KO:K05440]
122452995  interferon omega-1-like [KO:K05440]
122452987  interferon omega-1 [KO:K05440]
122452957  interferon omega-1-like [KO:K05440]
122452994  interferon omega-1-like [KO:K05440]
122452993  interferon omega-1-like [KO:K05440]
122452992  interferon omega-1-like [KO:K05440]
122452991  interferon omega-1-like [KO:K05440]
122452996  interferon omega-1-like isoform X1 [KO:K05440]
122452988  interferon omega-1-like [KO:K05440]
122452958  IFNE; interferon epsilon [KO:K05442]
122452803  IFNK; LOW QUALITY PROTEIN: interferon kappa [KO:K05441]
122421734  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1 [KO:K03171]
122431085  FADD; FAS-associated death domain protein [KO:K02373]
122429455  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
122426570  CASP8; caspase-8 [KO:K04398] [EC:3.4.22.61]
122446045  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
122432633  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
122420247  NFKBIB; NF-kappa-B inhibitor beta [KO:K02581]
122455294  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
122422050  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
122430633  RELA; transcription factor p65 isoform X1 [KO:K04735]
122442423  TRAF2; TNF receptor-associated factor 2 [KO:K03173] [EC:2.3.2.27]
122422588  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
122449806  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
122454236  MAP3K1; mitogen-activated protein kinase kinase kinase 1 isoform X1 [KO:K04416] [EC:2.7.11.25]
122440572  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
122428339  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
122446321  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
122429123  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
122429963  MAPK13; mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
122423531  MAPK11; mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
122423529  MAPK12; mitogen-activated protein kinase 12 [KO:K04441] [EC:2.7.11.24]
122428451  CXCL8; interleukin-8 [KO:K10030]
122428482  C-X-C motif chemokine 15-like isoform X1 [KO:K10030]
122430072  TNF; tumor necrosis factor [KO:K03156]
122444988  IL12A; interleukin-12 subunit alpha [KO:K05406]
122439617  IL12B; interleukin-12 subunit beta [KO:K05425]
122428400  CXCL10; C-X-C motif chemokine 10 [KO:K12671]
122432929  ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 [KO:K12968] [EC:3.5.4.37]
122451024  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 [KO:K10652] [EC:2.3.2.27]
122420341  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD isoform X1 [KO:K08601] [EC:3.4.19.12]
122425644  RNF125; E3 ubiquitin-protein ligase RNF125 [KO:K12170] [EC:2.3.2.27]
122452015  ISG15; ubiquitin-like protein ISG15 [KO:K12159]
122422633  ATG5; autophagy protein 5 isoform X1 [KO:K08339]
122442964  ATG12; ubiquitin-like protein ATG12 [KO:K08336]
122449767  NLRX1; NLR family member X1 [KO:K12653]
122439844  STING1; stimulator of interferon genes protein isoform X1 [KO:K12654]
122434431  OTUD5; OTU domain-containing protein 5 isoform X1 [KO:K12655] [EC:3.4.19.12]
122435886  SIKE1; suppressor of IKBKE 1 isoform X1 [KO:K12656]
122435072  ATP-dependent RNA helicase DDX3X-like isoform X1 [KO:K11594] [EC:5.6.2.7]
122434603  DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 [KO:K11594] [EC:5.6.2.7]
122440451  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
122431317  TKFC; triokinase/FMN cyclase [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
ccad04010  MAPK signaling pathway
ccad04120  Ubiquitin mediated proteolysis
ccad04210  Apoptosis
ccad04630  JAK-STAT signaling pathway
KO pathway
ko04622   
LinkDB

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