KEGG   PATHWAY: ccan05322
Entry
ccan05322                   Pathway                                
Name
Systemic lupus erythematosus - Castor canadensis (American beaver)
Description
Systemic lupus erythematosus (SLE) is a prototypic autoimmune disease characterised by the production of IgG autoantibodies that are specific for self-antigens, such as DNA, nuclear proteins and certain cytoplasmic components, in association with a diverse array of clinical manifestations. The primary pathological findings in patients with SLE are those of inflammation, vasculitis, immune complex deposition, and vasculopathy. Immune complexes comprising autoantibody and self-antigen is deposited particulary in the renal glomeruli and mediate a systemic inflammatory response by activating complement or via Fc{gamma}R-mediated neutrophil and macrophage activation. Activation of complement (C5) leads to injury both through formation of the membrane attack complex (C5b-9) or by generation of the anaphylatoxin and cell activator C5a. Neutrophils and macrophages cause tissue injury by the release of oxidants and proteases.
Class
Human Diseases; Immune disease
Pathway map
ccan05322  Systemic lupus erythematosus
ccan05322

Organism
Castor canadensis (American beaver) [GN:ccan]
Gene
109689592  C2; complement C2 [KO:K01332] [EC:3.4.21.43]
109689567  complement C4-A isoform X1 [KO:K03989]
109674054  histone H2A type 1-D [KO:K11251]
109674056  histone H2A type 1-J [KO:K11251]
109674059  histone H2A type 1-J [KO:K11251]
109703360  histone H2A-beta, sperm [KO:K11251]
109697376  core histone macro-H2A.1 isoform X1 [KO:K11251]
109697413  histone H2A.Z [KO:K11251]
109677244  histone H2A type 2-A [KO:K11251]
109675527  histone H2A-Bbd type 1-like [KO:K11251]
109677255  histone H2A type 1-like [KO:K11251]
109677266  histone H2A type 1-C-like [KO:K11251]
109677358  histone H2A type 2-A [KO:K11251]
109677368  histone H2A type 1-D [KO:K11251]
109677383  histone H2A type 1 [KO:K11251]
109677392  histone H2A type 2-B [KO:K11251]
109677402  histone H2A type 1-D [KO:K11251]
109677413  histone H2A type 2-C [KO:K11251]
109684190  histone H2A type 1-J [KO:K11251]
109693346  histone H2AX [KO:K11251]
109686592  histone H2A.V isoform X1 [KO:K11251]
109675728  histone H2A-Bbd type 1-like [KO:K11251]
109685137  core histone macro-H2A.2 [KO:K11251]
109700483  histone H2A type 3 [KO:K11251]
109674057  histone H2B type 1-N [KO:K11252]
109674058  histone H2B type 1 [KO:K11252]
109679009  histone H2B type F-M-like [KO:K11252]
109679010  histone H2B type W-T-like [KO:K11252]
109680353  histone H2B subacrosomal variant-like [KO:K11252]
109703356  histone H2B type 1-A [KO:K11252]
109697910  histone H2B type W-T-like [KO:K11252]
109697911  histone H2B type W-T-like [KO:K11252]
109677141  histone H2B type 2-F [KO:K11252]
109684967  late histone H2B.L4-like [KO:K11252]
109677420  histone H2B type 1 [KO:K11252]
109677431  histone H2B type 1-M [KO:K11252]
109677449  histone H2B type 1 [KO:K11252]
109677460  histone H2B type 1 [KO:K11252]
109677471  histone H2B type 1 [KO:K11252]
109677486  histone H2B type 2-E [KO:K11252]
109677496  histone H2B type 2-E [KO:K11252]
109677503  histone H2B type 1 [KO:K11252]
109677513  histone H2B type 2-E [KO:K11252]
109677524  histone H2B type 1 [KO:K11252]
109677535  histone H2B type 1-B [KO:K11252]
109700481  histone H2B type 3-B [KO:K11252]
109700482  histone H2B type 3-A [KO:K11252]
109674053  histone H3 [KO:K11253]
109674065  uncharacterized protein LOC109674065 [KO:K11253]
109692480  histone H3-like [KO:K11253]
109676951  uncharacterized protein LOC109676951 [KO:K11253]
109691487  histone H3.3 [KO:K11253]
109694259  histone H3.3-like [KO:K11253]
109695991  histone H3.3 [KO:K11253]
109699786  histone H3.3-like [KO:K11253]
109677311  histone H3 [KO:K11253]
109677327  LOW QUALITY PROTEIN: histone H3-like [KO:K11253]
109677343  histone H3 [KO:K11253]
109677594  histone H3 [KO:K11253]
109677616  histone H3.1-like [KO:K11253]
109677605  LOW QUALITY PROTEIN: uncharacterized protein LOC109677605 [KO:K11253]
109674061  histone H4 [KO:K11254]
109684193  histone H4 [KO:K11254]
109677546  histone H4 [KO:K11254]
109677557  histone H4 [KO:K11254]
109677565  histone H4 [KO:K11254]
109677576  histone H4 [KO:K11254]
109692892  Snrpb; small nuclear ribonucleoprotein-associated proteins B and B' [KO:K11086]
109686301  Snrpd1; small nuclear ribonucleoprotein Sm D1 [KO:K11087]
109697644  small nuclear ribonucleoprotein Sm D1-like [KO:K11087]
109690494  Snrpd3; small nuclear ribonucleoprotein Sm D3 [KO:K11088]
109679370  Grin2b; glutamate receptor ionotropic, NMDA 2B [KO:K05210]
109697799  Trim21; E3 ubiquitin-protein ligase TRIM21 [KO:K10651] [EC:2.3.2.27]
109700362  Trove2; 60 kDa SS-A/Ro ribonucleoprotein [KO:K11089]
109681840  Ssb; lupus La protein [KO:K11090]
109685993  LOW QUALITY PROTEIN: alpha-actinin-1-like [KO:K05699]
109695844  Actn4; alpha-actinin-4 isoform X1 [KO:K05699]
109674702  LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DRB1-15 beta chain-like [KO:K06752]
109674703  HLA class II histocompatibility antigen, DRB1-4 beta chain-like [KO:K06752]
109674664  HLA class II histocompatibility antigen, DR alpha chain [KO:K06752]
109674665  H-2 class II histocompatibility antigen, E-S beta chain-like [KO:K06752]
109685982  HLA class II histocompatibility antigen, DO beta chain [KO:K06752]
109686704  HLA class II histocompatibility antigen, DP beta 1 chain [KO:K06752]
109686705  HLA class II histocompatibility antigen, DO alpha chain [KO:K06752]
109686673  HLA class II histocompatibility antigen, DP alpha 1 chain [KO:K06752]
109686675  HLA class II histocompatibility antigen, DM alpha chain isoform X1 [KO:K06752]
109686676  HLA class II histocompatibility antigen, DM beta chain [KO:K06752]
109695178  rano class II histocompatibility antigen, A beta chain-like [KO:K06752]
109695186  SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [KO:K06752]
109695196  HLA class II histocompatibility antigen, DRB1-4 beta chain-like [KO:K06752]
109694534  Cd80; T-lymphocyte activation antigen CD80 [KO:K05412]
109682249  Cd86; T-lymphocyte activation antigen CD86 [KO:K05413]
109694003  Cd28; T-cell-specific surface glycoprotein CD28 [KO:K06470]
109681519  Cd40lg; CD40 ligand [KO:K03161]
109689299  Cd40; tumor necrosis factor receptor superfamily member 5 isoform X1 [KO:K03160]
109690391  Tnf; tumor necrosis factor isoform X1 [KO:K03156]
109676142  Ifng; interferon gamma [KO:K04687]
109688365  Il10; interleukin-10 [KO:K05443]
109677916  uncharacterized protein LOC109677916 [KO:K06856]
109682779  C1r; complement C1r subcomponent isoform X1 [KO:K01330] [EC:3.4.21.41]
109682778  C1s; complement C1s subcomponent [KO:K01331] [EC:3.4.21.42]
109694300  C3; complement C3 [KO:K03990]
109698715  complement C3 [KO:K03990]
109702060  C5; complement C5 [KO:K03994]
109680205  complement component C6-like [KO:K03995]
109695660  C7; LOW QUALITY PROTEIN: complement component C7 [KO:K03996]
109676182  C8a; complement component C8 alpha chain [KO:K03997]
109676181  C8b; complement component C8 beta chain isoform X1 [KO:K03998]
109699333  C8g; LOW QUALITY PROTEIN: complement component C8 gamma chain [KO:K03999]
109688336  C9; LOW QUALITY PROTEIN: complement component C9 [KO:K04000]
109676125  cathepsin G-like [KO:K01319] [EC:3.4.21.20]
109693670  neutrophil elastase-like [KO:K01327] [EC:3.4.21.37]
109677124  high affinity immunoglobulin gamma Fc receptor I-like isoform X1 [KO:K06498]
109693506  Fcgr2a; low affinity immunoglobulin gamma Fc region receptor II-a isoform X1 [KO:K06472]
109693505  low affinity immunoglobulin gamma Fc region receptor III-A-like [KO:K06463]
Compound
C00027  Hydrogen peroxide
C00434  Double-stranded DNA
C02737  Phosphatidylserine
Reference
  Authors
Rahman A, Isenberg DA.
  Title
Systemic lupus erythematosus.
  Journal
N Engl J Med 358:929-39 (2008)
DOI:10.1056/NEJMra071297
Reference
  Authors
Mok CC, Lau CS.
  Title
Pathogenesis of systemic lupus erythematosus.
  Journal
J Clin Pathol 56:481-90 (2003)
DOI:10.1136/jcp.56.7.481
Reference
  Authors
Clatworthy MR, Smith KG.
  Title
B cells in glomerulonephritis: focus on lupus nephritis.
  Journal
Semin Immunopathol 29:337-53 (2007)
DOI:10.1007/s00281-007-0092-1
Reference
PMID:8048228
  Authors
Couser WG.
  Title
New insights into mechanisms of immune glomerular injury.
  Journal
West J Med 160:440-6 (1994)
Reference
  Authors
Cook HT, Botto M.
  Title
Mechanisms of Disease: the complement system and the pathogenesis of systemic lupus erythematosus.
  Journal
Nat Clin Pract Rheumatol 2:330-7 (2006)
DOI:10.1038/ncprheum0191
Reference
  Authors
Carroll MC.
  Title
A protective role for innate immunity in systemic lupus erythematosus.
  Journal
Nat Rev Immunol 4:825-31 (2004)
DOI:10.1038/nri1456
Reference
  Authors
Sturfelt G, Truedsson L.
  Title
Complement and its breakdown products in SLE.
  Journal
Rheumatology (Oxford) 44:1227-32 (2005)
DOI:10.1093/rheumatology/keh719
Reference
  Authors
Lu L, Kaliyaperumal A, Boumpas DT, Datta SK.
  Title
Major peptide autoepitopes for nucleosome-specific T cells of human lupus.
  Journal
J Clin Invest 104:345-55 (1999)
DOI:10.1172/JCI6801
Reference
  Authors
Zieve GW, Khusial PR.
  Title
The anti-Sm immune response in autoimmunity and cell biology.
  Journal
Autoimmun Rev 2:235-40 (2003)
DOI:10.1016/S1568-9972(03)00018-1
Reference
  Authors
Scofield RH, Farris AD, Horsfall AC, Harley JB.
  Title
Fine specificity of the autoimmune response to the Ro/SSA and La/SSB ribonucleoproteins.
  Journal
Arthritis Rheum 42:199-209 (1999)
DOI:10.1002/1529-0131(199902)42:2<199::AID-ANR1>3.0.CO;2-1
Reference
  Authors
Hoffman RW.
  Title
T cells in the pathogenesis of systemic lupus erythematosus.
  Journal
Clin Immunol 113:4-13 (2004)
DOI:10.1016/j.clim.2004.05.001
Related
pathway
ccan04060  Cytokine-cytokine receptor interaction
ccan04514  Cell adhesion molecules
ccan04610  Complement and coagulation cascades
ccan04612  Antigen processing and presentation
ccan04630  JAK-STAT signaling pathway
ccan04660  T cell receptor signaling pathway
ccan04662  B cell receptor signaling pathway
ccan04670  Leukocyte transendothelial migration
KO pathway
ko05322   
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