KEGG   PATHWAY: osa03020
Entry
osa03020                    Pathway                                
Name
RNA polymerase - Oryza sativa japonica (Japanese rice) (RefSeq)
Class
Genetic Information Processing; Transcription
Pathway map
osa03020  RNA polymerase
osa03020

Other DBs
GO: 0000428
Organism
Oryza sativa japonica (Japanese rice) (RefSeq) [GN:osa]
Gene
3131432  rpoB; RNA polymerase beta subunit [KO:K03043] [EC:2.7.7.6]
3131433  rpoC1; RNA polymerase beta' subunit [KO:K03046] [EC:2.7.7.6]
3131434  rpoC2; RNA polymerase beta'' subunit [KO:K03046] [EC:2.7.7.6]
3131431  rpoA; RNA polymerase alpha subunit [KO:K03040] [EC:2.7.7.6]
4333571  DNA-directed RNA polymerase II subunit RPB2 [KO:K03010] [EC:2.7.7.6]
4337831  DNA-directed RNA polymerase II subunit 1 [KO:K03006] [EC:2.7.7.6]
9267835  DNA-directed RNA polymerase II subunit 1 [KO:K03006] [EC:2.7.7.6]
4346392  DNA-directed RNA polymerases II, IV and V subunit 3 [KO:K03011]
4342517  DNA-directed RNA polymerases II, IV and V subunit 11 [KO:K03008]
4328083  DNA-directed RNA polymerase II subunit 4 [KO:K03012]
4330570  DNA-directed RNA polymerase II subunit 4 isoform X1 [KO:K03012]
4338726  DNA-directed RNA polymerase II subunit RPB7 [KO:K03015]
4352511  DNA-directed RNA polymerases II, IV and V subunit 9B [KO:K03017]
4331295  DNA-directed RNA polymerases II, IV and V subunit 9B [KO:K03017]
4343902  DNA-directed RNA polymerases II, IV and V subunit 9A isoform X1 [KO:K03017]
4333066  DNA-directed RNA polymerase III subunit 2 isoform X1 [KO:K03021] [EC:2.7.7.6]
4336254  DNA-directed RNA polymerase III subunit 1 [KO:K03018] [EC:2.7.7.6]
4351715  DNA-directed RNA polymerases I and III subunit RPAC2 [KO:K03020]
4350089  DNA-directed RNA polymerases I and III subunit RPAC2 [KO:K03020]
4332531  DNA-directed RNA polymerases I and III subunit rpac1 [KO:K03027]
4325277  uncharacterized protein LOC4325277 isoform X1 [KO:K03023]
4335691  DNA-directed RNA polymerase III subunit RPC4 [KO:K03026]
4324905  transcription initiation factor TFIID subunit 7-like isoform X1 [KO:K03026]
9268125  DNA-directed RNA polymerase III subunit RPC5 [KO:K14721]
4341464  DNA-directed RNA polymerase III subunit RPC6 [KO:K03025]
4343875  glutamic acid-rich protein [KO:K03024]
4343220  DNA-directed RNA polymerase III subunit RPC8 [KO:K03022]
4352240  uncharacterized protein LOC4352240 isoform X1 [KO:K25304]
4330285  DNA-directed RNA polymerase III subunit RPC10 [KO:K03019]
9270457  DNA-directed RNA polymerase I subunit 2 isoform X1 [KO:K03002] [EC:2.7.7.6]
9270399  DNA-directed RNA polymerase I subunit 1 [KO:K02999] [EC:2.7.7.6]
4333888  DNA-directed RNA polymerase I subunit RPA12 [KO:K03000]
4325336  tropomyosin [KO:K03004]
4350918  uncharacterized protein LOC4350918 isoform X1 [KO:K03005]
4327549  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
9270850  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
4349748  DNA-directed RNA polymerase V subunit 5A [KO:K03013]
4351463  DNA-directed RNA polymerase V subunit 5A [KO:K03013]
4343168  DNA-directed RNA polymerases II, IV and V subunit 6A [KO:K03014]
4333343  DNA-directed RNA polymerases II, IV and V subunit 6A [KO:K03014]
107277526  DNA-directed RNA polymerases II, IV and V subunit 6A-like [KO:K03014]
4334766  DNA-directed RNA polymerases II, IV and V subunit 8B [KO:K03016]
4341946  DNA-directed RNA polymerases II, IV and V subunit 8B [KO:K03016]
9272152  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
9269422  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
4349985  DNA-directed RNA polymerases I, II, and III subunit RPABC5 [KO:K03007]
4351671  DNA-directed RNA polymerases I, II, and III subunit RPABC5 [KO:K03007]
4336722  DNA-directed RNA polymerase IV subunit 1 isoform X1 [KO:K16250] [EC:2.7.7.6]
4347810  DNA-directed RNA polymerase IV subunit 1 isoform X1 [KO:K16250] [EC:2.7.7.6]
4328330  DNA-directed RNA polymerase V subunit 1 [KO:K16251] [EC:2.7.7.6]
107276722  DNA-directed RNA polymerase V subunit 1-like [KO:K16251] [EC:2.7.7.6]
4337169  DNA-directed RNA polymerases IV and V subunit 2 [KO:K16252] [EC:2.7.7.6]
4344774  DNA-directed RNA polymerases IV and V subunit 2 [KO:K16252] [EC:2.7.7.6]
4337866  DNA-directed RNA polymerase V subunit 7 [KO:K16253]
107278405  DNA-directed RNA polymerase V subunit 7-like [KO:K16253]
Reference
  Authors
Zhang G, Campbell EA, Minakhin L, Richter C, Severinov K, Darst SA.
  Title
Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.
  Journal
Cell 98:811-824 (1999)
DOI:10.1016/S0092-8674(00)81515-9
Reference
  Authors
Cramer P, Bushnell DA, Fu J, Gnatt AL, Maier-Davis B, Thompson NE, Burgess RR, Edwards AM, David PR, Kornberg RD.
  Title
Architecture of RNA polymerase II and implications for the transcription mechanism.
  Journal
Science 288:640-649 (2000)
DOI:10.1126/science.288.5466.640
Reference
  Authors
Hirata A, Murakami KS
  Title
Archaeal RNA polymerase.
  Journal
Curr Opin Struct Biol 19:724-31 (2009)
DOI:10.1016/j.sbi.2009.10.006
Reference
  Authors
Cramer P, Armache KJ, Baumli S, Benkert S, Brueckner F, Buchen C, Damsma GE, Dengl S, Geiger SR, Jasiak AJ, Jawhari A, Jennebach S, Kamenski T, Kettenberger H, Kuhn CD, Lehmann E, Leike K, Sydow JF, Vannini A
  Title
Structure of eukaryotic RNA polymerases.
  Journal
Annu Rev Biophys 37:337-52 (2008)
DOI:10.1146/annurev.biophys.37.032807.130008
KO pathway
ko03020   
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