SSDB Best Search Result

Entry:mze:101476588 (918 a.a.)
Name:CCR4-NOT transcription complex subunit 3 isoform X1
KO:K12580 CCR4-NOT transcription complex subunit 3
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Search Result : 161 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
ola:101168303 CCR4-NOT transcription complex subunit 3  K12580     909     4917     0.840      930     
dre:449540 CCR4-NOT transcription complex subunit 3a    K12580     908     3918     0.687      942     
mmu:232791 CCR4-NOT transcription complex, subunit 3    K12580     751     3159     0.616      924     
rno:308311 CCR4-NOT transcription complex subunit 3     K12580     751     3158     0.615      921     
fca:101080754 CCR4-NOT transcription complex subunit 3  K12580     746     3149     0.609      921     
ssc:100520963 CCR4-NOT transcription complex subunit 3  K12580     755     3148     0.608      924     
ocu:100328776 CCR4-NOT transcription complex subunit 3  K12580     748     3143     0.610      921     
hsa:4849 CCR4-NOT transcription complex subunit 3       K12580     753     3137     0.605      921     
cfa:484312 CCR4-NOT transcription complex subunit 3 iso K12580     754     3133     0.605      924     
ecb:100049807 CCR4-NOT transcription complex subunit 3  K12580     755     3128     0.605      923     
bta:527305 CCR4-NOT transcription complex subunit 3 iso K12580     744     3115     0.608      923     
mcc:693292 CCR4-NOT transcription complex subunit 3 iso K12580     752     3113     0.603      922     
mdo:100028531 CCR4-NOT transcription complex subunit 3  K12580     725     3011     0.594      921     
xtr:100158546 CCR4-NOT transcription complex subunit 3  K12580     727     2996     0.586      945     
xla:446827 CCR4-NOT transcription complex subunit 3 S h K12580     728     2973     0.580      941     
aag:5577014 CCR4-NOT transcription complex subunit 3 is K12580     920     2224     0.432      949     
aga:1279988 CCR4-NOT transcription complex subunit 3    K12580     969     2186     0.427      990     
dme:Dmel_CG8426 CCR4-NOT transcription complex subunit  K12580     844     2012     0.420      930     
ame:411794 CCR4-NOT transcription complex subunit 3     K12580     684     1964     0.432      921     
tca:659082 CCR4-NOT transcription complex subunit 3     K12580     672     1860     0.420      918     
bmor:101737241 CCR4-NOT transcription complex subunit 3 K12580     671     1722     0.411      947     
gmx:100783415 CCR4-NOT transcription complex subunit 3  K12580     878     1429     0.339      956     
cit:102613279 general negative regulator of transcripti K12580     892     1423     0.340      952     
vvi:100253711 uncharacterized protein LOC100253711 isof K12580     890     1421     0.341      959     
mdm:103438288 uncharacterized protein isoform X1        K12580     897     1401     0.353      963     
rcu:8276524 general negative regulator of transcription K12580     891     1398     0.334      972     
csv:101206210 general negative regulator of transcripti K12580     900     1389     0.335      970     
mtr:11437872 CCR4-NOT transcription complex subunit 3 i K12580     901     1360     0.337      971     
zma:100193927 uncharacterized protein LOC100193927      K12580     855     1328     0.339      943     
ath:AT5G18230 transcription regulator NOT2/NOT3/NOT5 fa K12580     845     1302     0.342      954     
osa:4333598 uncharacterized protein isoform X1          K12580     863     1297     0.322      958     
sly:101245924 uncharacterized protein isoform X1        K12580     848     1261     0.335      949     
cel:CELE_Y56A3A.1 Not3 domain-containing protein        K12580     701     1131     0.311      928     
ddi:DDB_G0272056 NOT2/NOT3/NOT5 family protein          K12580     866     1063     0.277      934     
mgr:MGG_08101 CCR4-NOT transcription complex            K12580     665     1019     0.304      913     
cne:CNF03820 hypothetical protein                       K12580     696     1015     0.295      914     
ncr:NCU03855 CCR4-NOT transcription complex             K12580     640      969     0.294      915     
cre:CHLRE_04g227350v5 uncharacterized protein           K12580     769      885     0.272      933     
spo:2542126 CCR4-Not complex subunit Not3/5             K12580     640      883     0.280      913     
aor:AO090011000479 unnamed protein product; CCR4-NOT tr K12580     615      873     0.282      917     
ani:ANIA_04585 hypothetical protein                     K12580     616      865     0.283      914     
afm:AFUA_2G02070 CCR4-NOT transcription complex, subuni K12580     620      860     0.282      915     
fgr:FGSG_13746 hypothetical protein                     K12580     582      846     0.344      453     
sce:YIL038C CCR4-NOT core subunit NOT3                  K12580     836      777     0.248      912     
cal:CAALFM_C108300WA CCR4-NOT core subunit              K12580     662      684     0.319      479     
kla:KLLA0_B09196g uncharacterized protein               K12580     590      663     0.309      427     
lma:LMJF_35_0550 proteophosphoglycan ppg1                         2425      609     0.300      623     
tps:THAPSDRAFT_37963 predicted protein                  K12580     140      532     0.592      130     
spn:SP_1772 cell wall surface anchor family protein               4776      459     0.244      512     
tbr:Tb927.3.1920 hypothetical protein, conserved        K12580     604      448     0.259      518     
sau:SA2447 ORFID:SA2447; hypothetical protein, similar            2271      435     0.253      526     
lla:L73264 unknown protein                                        1063      433     0.282      468     
gga:101747234 mucin-19-like                                       3403      431     0.250      555     
vg:80515181 Bodo saltans virus; hypothetical protein               613      425     0.290      497     
pti:PHATRDRAFT_9231 hypothetical protein                K12580     107      425     0.670      88      
sao:SAOUHSC_02990 hypothetical protein                            2271      424     0.253      529     
ser:SERP2281 serine threonine rich antigen                        1870      410     0.247      518     
bps:BPSS1439 putative membrane-anchored cell surface pr           1530      408     0.292      551     
bma:BMAA0090 putative lipoprotein                                  584      394     0.259      518     
cau:Caur_0201 autotransporter-associated beta strand re           1320      388     0.219      608     
mlo:mlr0587 hypothetical glycine-rich protein                     3145      376     0.237      548     
btk:BT9727_4458 collagen-like protein                             1055      365     0.227      599     
pfa:PF3D7_1006100 CCR4-NOT transcription complex subuni            178      345     0.404      141     
bce:BC3712 hypothetical Membrane Spanning Protein                  818      344     0.210      543     
ljo:LJ_1711 hypothetical protein                                  3039      330     0.221      737     
lpl:lp_1303a cell surface SD repeat protein precursor,m           3378      322     0.232      538     
ban:BA_4978 collagen triple helix repeat domain protein            469      320     0.244      402     
rso:RSp0803 putative hemagglutinin-related signal pepti            667      320     0.239      578     
cdf:CD630_32300 putative exosporium glycoprotein                   558      308     0.215      549     
reh:H16_B0055 Glycine-rich protein                                 504      307     0.254      480     
psb:Psyr_1608 ice-nucleation proteins octamer repeat pr           1348      305     0.269      525     
bxe:Bxe_B0516 putative lipoprotein                                 573      304     0.251      486     
cgl:Cgl1812 Hypothetical membrane protein                         1488      296     0.258      442     
son:SO_0189 bifunctional autotransporter / adhesin cadh           2522      288     0.235      558     
pae:PA1874 hypothetical protein                         K20276    2468      287     0.234      552     
mtu:Rv3590c PE-PGRS family protein PE_PGRS58                       584      287     0.240      304     
mtc:MT3696 PE_PGRS family protein                                  584      287     0.240      304     
xcc:XCC0507 ice nucleation protein                                1333      286     0.236      534     
mba:Mbar_A1864 conserved hypothetical protein                      656      283     0.221      542     
eam:EAMY_2970 Nuclear pore complex protein Nup98-Nup96             388      282     0.253      388     
llm:llmg_1127 cell wall surface anchor family protein             1349      281     0.219      515     
mab:MAB_4284c Hypothetical protein                                 687      274     0.232      501     
ksk:KSE_60430 hypothetical protein                                 767      272     0.235      485     
npu:Npun_F1300 hypothetical protein                                273      269     0.289      266     
bja:blr2728 ORF_ID:blr2728; unknown protein                        519      269     0.241      419     
ecs:ECs_1650 phage side tail fiber protein                         971      268     0.215      608     
ece:Z1918 putative membrane protein of prophage CP-933X            973      268     0.215      608     
ypk:y0943 putative membrane protein                               1526      267     0.219      552     
eba:ebA4680 hypothetical protein, INTERPRO suggestion:             452      264     0.221      443     
xom:XOO4217 putative hemagglutinin                                1210      263     0.242      595     
xac:XAC3546 outer membrane protein                      K21449    2190      259     0.233      493     
yps:YPTB0880 putative adhesin; involved in the adherenc           2056      257     0.234      444     
ype:YPO3247 putative adhesin                                      1910      253     0.217      552     
ddd:Dda3937_02943 type III secreted protein                        569      249     0.245      375     
sct:SCAT_4465 Neutral zinc metalloprotease                         655      248     0.236      462     
nmr:Nmar_0456 hypothetical protein                                2764      248     0.225      516     
fps:FP0688 Protein of unknown function precursor; putat           2310      247     0.208      491     
bme:BMEII0148 extracellular serine protease             K19231    2554      246     0.234      535     
lil:LB_216 lipoprotein                                             698      244     0.253      304     
ccr:CC_1007 S-layer protein RsaA                        K12544    1073      242     0.220      500     
gsu:GSU0754 hypothetical protein                                  2192      240     0.221      538     
rha:RHA1_ro05486 conserved hypothetical protein                   1167      239     0.349      172     
rpa:TX73_008660 autotransporter-associated beta strand            1331      239     0.234      376     
pde:Pden_4338 PE-PGRS family protein                               603      238     0.224      425     
amd:AMED_5237 hypothetical protein                                 687      237     0.254      378     
bmf:BAB2_1107 Aminoacyl-tRNA synthetase, class I:ATP/GT K19231    3422      235     0.222      427     
sme:SM_b21548 hypothetical protein                                2174      235     0.215      447     
acb:A1S_0745 hypothetical protein                                  873      233     0.220      423     
bms:BRA1148 outer membrane autotransporter              K19231    3420      233     0.222      427     
xfa:XF_1981 surface protein                             K21449    1190      232     0.213      489     
eca:ECA2112 type III effector protein                              479      230     0.262      332     
apl:APL_0104 autotransporter adhesin                    K21449    3154      228     0.212      553     
ag:BAM68255 trimeric autotransporter adhesin            K21449    3630      227     0.234      432     
gvi:glr1305 ORF_ID:glr1305; unknown protein                        540      222     0.230      508     
cro:ROD_p1121 putative autotransporter adhesin                    1593      220     0.233      489     
yen:YE0479 putative lipoprotein                                    367      220     0.261      310     
sai:Saci_2215 hypothetical protein                                 879      219     0.228      605     
ctr:CT_413 outer membrane protein PmpB                            1751      217     0.219      570     
ret:RHE_CH01372 hypothetical conserved protein                    1709      213     0.203      508     
sma:SAVERM_4164 putative membrane protein                          428      213     0.237      325     
seo:STM14_5049 putative phage tail fiber protein H                 581      212     0.226      425     
stm:STM4200 putative phage tail fiber protein H                    581      212     0.226      425     
ctb:CTL0670 polymorphic outer membrane protein                    1749      211     0.228      513     
syn:slr1028 integrin alpha-subunit domain homologue               3972      211     0.220      577     
aci:ACIAD1854 putative phage-related protein                       469      210     0.232      379     
ana:all2793 unknown protein                                        681      209     0.255      325     
cje:Cj0628 lipoprotein                                  K12689    1144      208     0.224      429     
atu:Atu3276 conserved hypothetical protein                        1341      205     0.220      459     
avn:Avin_12280 hypothetical protein                               2716      204     0.229      428     
rle:pRL90140 unnamed protein product                               777      203     0.209      488     
cpn:CPn_0808 CT579 hypothetical protein                            444      203     0.236      419     
tre:TRIREDRAFT_49081 glycoside hydrolase family 74      K18578     838      202     0.255      400     
rsp:RSP_3854 Ice nucleation protein                               1561      201     0.219      466     
dra:DR_B0065 hypothetical protein                       K07004    1145      201     0.226      492     
sgu:SGLAU_27490 putative secreted protein                          308      197     0.276      192     
ppu:PP_4378 flagellin, filament structural protein      K02406     687      194     0.220      508     
dvu:DVU_0961 conserved hypothetical protein                       1354      191     0.233      455     
tel:tlr1645 ORF_ID:tlr1645; hypothetical protein                  1422      191     0.217      590     
kpn:KPN_pKPN3p06031 F pilus assembly and aggregate stab K12056     949      186     0.211      559     
mta:Moth_0241 Glycosyl hydrolase, BNR repeat                      1143      186     0.208      539     
mca:MCA0875 serine protease, subtilase family                      663      184     0.231      438     
sco:SCO0752 protease precursor                          K18547     437      181     0.252      310     
fnu:FN1554 Fusobacterium outer membrane protein family            1582      179     0.216      518     
lpn:lpg1340 flagellin                                   K02406     475      178     0.282      308     
bpe:BP1110 serine protease                                        1076      178     0.247      361     
pst:PSPTO_1951 flagellar hook-associated protein FliD   K02407     492      175     0.240      429     
rco:RC1273 190-KDa cell surface antigen                           2021      175     0.208      423     
smar:SM39_1031 surface layer protein                               871      169     0.200      421     
rru:Rru_A2610 hypothetical protein                                1313      168     0.198      606     
enc:ECL_00842 hypothetical protein                                 847      167     0.220      419     
sfl:SF3640 hypothetical protein                                    382      166     0.251      374     
syc:syc0266_c similar to S-layer-RTX protein                       610      162     0.220      504     
bsu:BSU10300 subtilisin E                               K01342     381      159     0.258      271     
syf:Synpcc7942_1287 VCBS                                           610      158     0.218      504     
bfr:BF0944 putative outer membrane protein probably inv           1105      153     0.203      296     
vch:VC_A0863 lipase, putative                                      796      150     0.232      328     
hal:VNG_2019C conserved hypothetical protein                       600      149     0.240      246     
sgr:SGR_5625 putative aldehyde dehydrogenase            K14519     506      148     0.190      357     
bth:BT_3750 SusC homolog                                           866      147     0.235      247     
mle:ML1966 possible lipoprotein                         K14953     161      146     0.250      128     
sty:STY1677 outer membrane lipoprotein SlyB precursor   K06077     155      129     0.248      165     

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